data_8VOU
#
_model_server_result.job_id            0m7Wz6zpKjZg0FsFPMyBHw 
_model_server_result.datetime_utc      '2025-07-17 17:09:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8vou 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":301}' 
#
_entry.id    8VOU 
#
_exptl.entry_id    8VOU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              634.782 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            L-gamma-glutamyl-S-[(8R,9S)-1-carboxy-9-nitroheptadecan-8-yl]-L-cysteinylglycine 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8VOU 
_cell.length_a            57.383 
_cell.length_b            84.025 
_cell.length_c            213.321 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8VOU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,J,K 1 1 
C,D,G,H,I,L,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 I N N 
#
_chem_comp.formula           'C28 H50 N4 O10 S' 
_chem_comp.formula_weight    634.782 
_chem_comp.id                A1AWW 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              L-gamma-glutamyl-S-[(8R,9S)-1-carboxy-9-nitroheptadecan-8-yl]-L-cysteinylglycine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OE1 CD1 A1AWW doub 1 n n 
CD1 N2 A1AWW sing 2 n n 
N2 CA2 A1AWW sing 3 n n 
CA2 C2 A1AWW sing 4 n n 
C2 N3 A1AWW sing 5 n n 
N3 CA3 A1AWW sing 6 n n 
CA3 C3 A1AWW sing 7 n n 
C3 O32 A1AWW sing 8 n n 
C3 O31 A1AWW doub 9 n n 
C2 O2 A1AWW doub 10 n n 
CA2 CB2 A1AWW sing 11 n n 
CB2 SG2 A1AWW sing 12 n n 
SG2 C20 A1AWW sing 13 n n 
C20 C21 A1AWW sing 14 n n 
C21 C22 A1AWW sing 15 n n 
C22 C23 A1AWW sing 16 n n 
C23 C24 A1AWW sing 17 n n 
C24 C25 A1AWW sing 18 n n 
C25 C26 A1AWW sing 19 n n 
C26 C27 A1AWW sing 20 n n 
C27 C28 A1AWW sing 21 n n 
C28 O29 A1AWW sing 22 n n 
C28 O30 A1AWW doub 23 n n 
C20 C31 A1AWW sing 24 n n 
C31 C32 A1AWW sing 25 n n 
C32 C33 A1AWW sing 26 n n 
C33 C34 A1AWW sing 27 n n 
C34 C35 A1AWW sing 28 n n 
C35 C36 A1AWW sing 29 n n 
C36 C37 A1AWW sing 30 n n 
C37 C38 A1AWW sing 31 n n 
C38 C39 A1AWW sing 32 n n 
C31 N40 A1AWW sing 33 n n 
N40 O41 A1AWW sing 34 n n 
N40 O42 A1AWW doub 35 n n 
CD1 CG1 A1AWW sing 36 n n 
CG1 CB1 A1AWW sing 37 n n 
CB1 CA1 A1AWW sing 38 n n 
CA1 N1 A1AWW sing 39 n n 
CA1 C1 A1AWW sing 40 n n 
C1 O12 A1AWW sing 41 n n 
C1 O11 A1AWW doub 42 n n 
CA2 HA2 A1AWW sing 43 n n 
N3 HN3 A1AWW sing 44 n n 
CA3 HA32 A1AWW sing 45 n n 
CA3 HA31 A1AWW sing 46 n n 
C20 H20 A1AWW sing 47 n n 
C21 H21B A1AWW sing 48 n n 
C21 H21A A1AWW sing 49 n n 
C22 H22B A1AWW sing 50 n n 
C22 H22A A1AWW sing 51 n n 
C24 H24B A1AWW sing 52 n n 
C24 H24A A1AWW sing 53 n n 
C26 H26B A1AWW sing 54 n n 
C26 H26A A1AWW sing 55 n n 
N1 H3 A1AWW sing 56 n n 
N1 HN11 A1AWW sing 57 n n 
CA1 HA1 A1AWW sing 58 n n 
CB1 HB13 A1AWW sing 59 n n 
CB1 HB12 A1AWW sing 60 n n 
N2 HN2 A1AWW sing 61 n n 
O32 H32 A1AWW sing 62 n n 
CB2 HB23 A1AWW sing 63 n n 
CB2 HB22 A1AWW sing 64 n n 
C23 H23A A1AWW sing 65 n n 
C23 H23B A1AWW sing 66 n n 
C25 H25A A1AWW sing 67 n n 
C25 H25B A1AWW sing 68 n n 
C27 H27A A1AWW sing 69 n n 
C27 H27B A1AWW sing 70 n n 
O29 H4 A1AWW sing 71 n n 
C31 H31 A1AWW sing 72 n n 
C32 H32B A1AWW sing 73 n n 
C32 H32A A1AWW sing 74 n n 
C33 H33A A1AWW sing 75 n n 
C33 H33B A1AWW sing 76 n n 
C34 H34A A1AWW sing 77 n n 
C34 H34B A1AWW sing 78 n n 
C35 H35B A1AWW sing 79 n n 
C35 H35A A1AWW sing 80 n n 
C36 H36B A1AWW sing 81 n n 
C36 H36A A1AWW sing 82 n n 
C37 H37A A1AWW sing 83 n n 
C37 H37B A1AWW sing 84 n n 
C38 H38A A1AWW sing 85 n n 
C38 H38B A1AWW sing 86 n n 
C39 H39A A1AWW sing 87 n n 
C39 H39C A1AWW sing 88 n n 
C39 H39B A1AWW sing 89 n n 
CG1 HG12 A1AWW sing 90 n n 
CG1 HG13 A1AWW sing 91 n n 
O12 H12 A1AWW sing 92 n n 
#
_atom_sites.entry_id                     8VOU 
_atom_sites.fract_transf_matrix[1][1]    0.017427 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011901 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004688 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 A1AWW A 1 301 301 A1AWW LIG . 
F 2 A1AWW B 1 301 301 A1AWW LIG . 
G 2 A1AWW C 1 301 301 A1AWW LIG . 
H 3 GSH C 1 302 302 GSH GSH . 
I 2 A1AWW D 1 301 301 A1AWW LIG . 
J 4 HOH A 1 401 82 HOH HOH . 
J 4 HOH A 2 402 46 HOH HOH . 
J 4 HOH A 3 403 76 HOH HOH . 
J 4 HOH A 4 404 16 HOH HOH . 
J 4 HOH A 5 405 80 HOH HOH . 
J 4 HOH A 6 406 69 HOH HOH . 
J 4 HOH A 7 407 65 HOH HOH . 
J 4 HOH A 8 408 61 HOH HOH . 
J 4 HOH A 9 409 27 HOH HOH . 
J 4 HOH A 10 410 84 HOH HOH . 
J 4 HOH A 11 411 8 HOH HOH . 
J 4 HOH A 12 412 89 HOH HOH . 
J 4 HOH A 13 413 66 HOH HOH . 
J 4 HOH A 14 414 88 HOH HOH . 
J 4 HOH A 15 415 11 HOH HOH . 
J 4 HOH A 16 416 59 HOH HOH . 
J 4 HOH A 17 417 49 HOH HOH . 
J 4 HOH A 18 418 35 HOH HOH . 
J 4 HOH A 19 419 41 HOH HOH . 
J 4 HOH A 20 420 12 HOH HOH . 
J 4 HOH A 21 421 34 HOH HOH . 
J 4 HOH A 22 422 42 HOH HOH . 
J 4 HOH A 23 423 77 HOH HOH . 
J 4 HOH A 24 424 68 HOH HOH . 
J 4 HOH A 25 425 43 HOH HOH . 
K 4 HOH B 1 401 30 HOH HOH . 
K 4 HOH B 2 402 20 HOH HOH . 
K 4 HOH B 3 403 10 HOH HOH . 
K 4 HOH B 4 404 57 HOH HOH . 
K 4 HOH B 5 405 52 HOH HOH . 
K 4 HOH B 6 406 78 HOH HOH . 
K 4 HOH B 7 407 7 HOH HOH . 
K 4 HOH B 8 408 50 HOH HOH . 
K 4 HOH B 9 409 24 HOH HOH . 
K 4 HOH B 10 410 70 HOH HOH . 
K 4 HOH B 11 411 73 HOH HOH . 
K 4 HOH B 12 412 60 HOH HOH . 
K 4 HOH B 13 413 3 HOH HOH . 
K 4 HOH B 14 414 26 HOH HOH . 
K 4 HOH B 15 415 75 HOH HOH . 
K 4 HOH B 16 416 9 HOH HOH . 
K 4 HOH B 17 417 56 HOH HOH . 
K 4 HOH B 18 418 13 HOH HOH . 
K 4 HOH B 19 419 36 HOH HOH . 
K 4 HOH B 20 420 71 HOH HOH . 
K 4 HOH B 21 421 85 HOH HOH . 
L 4 HOH C 1 401 2 HOH HOH . 
L 4 HOH C 2 402 79 HOH HOH . 
L 4 HOH C 3 403 19 HOH HOH . 
L 4 HOH C 4 404 58 HOH HOH . 
L 4 HOH C 5 405 40 HOH HOH . 
L 4 HOH C 6 406 29 HOH HOH . 
L 4 HOH C 7 407 55 HOH HOH . 
L 4 HOH C 8 408 18 HOH HOH . 
L 4 HOH C 9 409 14 HOH HOH . 
L 4 HOH C 10 410 62 HOH HOH . 
L 4 HOH C 11 411 15 HOH HOH . 
L 4 HOH C 12 412 23 HOH HOH . 
L 4 HOH C 13 413 45 HOH HOH . 
M 4 HOH D 1 401 33 HOH HOH . 
M 4 HOH D 2 402 86 HOH HOH . 
M 4 HOH D 3 403 83 HOH HOH . 
M 4 HOH D 4 404 64 HOH HOH . 
M 4 HOH D 5 405 6 HOH HOH . 
M 4 HOH D 6 406 44 HOH HOH . 
M 4 HOH D 7 407 1 HOH HOH . 
M 4 HOH D 8 408 74 HOH HOH . 
M 4 HOH D 9 409 54 HOH HOH . 
M 4 HOH D 10 410 72 HOH HOH . 
M 4 HOH D 11 411 48 HOH HOH . 
M 4 HOH D 12 412 63 HOH HOH . 
M 4 HOH D 13 413 38 HOH HOH . 
M 4 HOH D 14 414 39 HOH HOH . 
M 4 HOH D 15 415 21 HOH HOH . 
M 4 HOH D 16 416 17 HOH HOH . 
M 4 HOH D 17 417 37 HOH HOH . 
M 4 HOH D 18 418 22 HOH HOH . 
M 4 HOH D 19 419 87 HOH HOH . 
M 4 HOH D 20 420 51 HOH HOH . 
M 4 HOH D 21 421 4 HOH HOH . 
M 4 HOH D 22 422 28 HOH HOH . 
M 4 HOH D 23 423 25 HOH HOH . 
M 4 HOH D 24 424 32 HOH HOH . 
M 4 HOH D 25 425 47 HOH HOH . 
M 4 HOH D 26 426 5 HOH HOH . 
M 4 HOH D 27 427 81 HOH HOH . 
M 4 HOH D 28 428 67 HOH HOH . 
M 4 HOH D 29 429 31 HOH HOH . 
M 4 HOH D 30 430 53 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CD1 A1AWW . . . F 2 3.451 21.424 83.054 1 55.59 ? CD1 A1AWW 301 B 1 
HETATM 2 C CA2 A1AWW . . . F 2 3.496 23.167 84.745 1 57.31 ? CA2 A1AWW 301 B 1 
HETATM 3 N N3 A1AWW . . . F 2 4.959 24.881 83.771 1 54.02 ? N3 A1AWW 301 B 1 
HETATM 4 C CA3 A1AWW . . . F 2 5.688 26.127 83.739 1 54.68 ? CA3 A1AWW 301 B 1 
HETATM 5 C C20 A1AWW . . . F 2 0.636 22.152 86.235 1 66.93 ? C20 A1AWW 301 B 1 
HETATM 6 C C21 A1AWW . . . F 2 -0.175 23.394 85.87 1 69.57 ? C21 A1AWW 301 B 1 
HETATM 7 C C22 A1AWW . . . F 2 -0.565 23.535 84.399 1 72.73 ? C22 A1AWW 301 B 1 
HETATM 8 C C24 A1AWW . . . F 2 -2.09 24.82 82.79 1 81.31 ? C24 A1AWW 301 B 1 
HETATM 9 C C26 A1AWW . . . F 2 -3.65 26.737 83.493 1 88.44 ? C26 A1AWW 301 B 1 
HETATM 10 C C28 A1AWW . . . F 2 -5.649 27.764 82.192 1 94.4 ? C28 A1AWW 301 B 1 
HETATM 11 N N1 A1AWW . . . F 2 3.827 16.84 81.435 1 47.29 1 N1 A1AWW 301 B 1 
HETATM 12 C CA1 A1AWW . . . F 2 4.564 17.882 82.2 1 48.68 ? CA1 A1AWW 301 B 1 
HETATM 13 C C1 A1AWW . . . F 2 5.093 17.277 83.497 1 47.6 ? C1 A1AWW 301 B 1 
HETATM 14 O O11 A1AWW . . . F 2 6.147 17.752 83.978 1 44.41 ? O11 A1AWW 301 B 1 
HETATM 15 C CB1 A1AWW . . . F 2 3.639 19.032 82.57 1 51.24 ? CB1 A1AWW 301 B 1 
HETATM 16 O OE1 A1AWW . . . F 2 2.237 21.512 82.901 1 57.34 ? OE1 A1AWW 301 B 1 
HETATM 17 N N2 A1AWW . . . F 2 4.145 22.257 83.824 1 56.71 ? N2 A1AWW 301 B 1 
HETATM 18 C C2 A1AWW . . . F 2 4.179 24.546 84.805 1 55.71 ? C2 A1AWW 301 B 1 
HETATM 19 C C3 A1AWW . . . F 2 6.252 26.455 82.365 1 57.1 ? C3 A1AWW 301 B 1 
HETATM 20 O O32 A1AWW . . . F 2 7.242 27.229 82.341 1 57.96 -1 O32 A1AWW 301 B 1 
HETATM 21 O O31 A1AWW . . . F 2 5.709 25.955 81.352 1 57.18 ? O31 A1AWW 301 B 1 
HETATM 22 O O2 A1AWW . . . F 2 3.981 25.306 85.751 1 54.96 ? O2 A1AWW 301 B 1 
HETATM 23 C CB2 A1AWW . . . F 2 3.502 22.463 86.099 1 60.31 ? CB2 A1AWW 301 B 1 
HETATM 24 S SG2 A1AWW . . . F 2 2.084 22.769 87.154 1 64.82 ? SG2 A1AWW 301 B 1 
HETATM 25 C C23 A1AWW . . . F 2 -1.361 24.807 84.127 1 76.83 ? C23 A1AWW 301 B 1 
HETATM 26 C C25 A1AWW . . . F 2 -2.734 26.159 82.42 1 85.17 ? C25 A1AWW 301 B 1 
HETATM 27 C C27 A1AWW . . . F 2 -4.415 27.986 83.056 1 91.64 ? C27 A1AWW 301 B 1 
HETATM 28 O O29 A1AWW . . . F 2 -6.701 27.35 82.759 1 94.83 -1 O29 A1AWW 301 B 1 
HETATM 29 O O30 A1AWW . . . F 2 -5.563 28.025 80.97 1 95.39 ? O30 A1AWW 301 B 1 
HETATM 30 C C31 A1AWW . . . F 2 -0.143 21.078 87.024 1 66.25 ? C31 A1AWW 301 B 1 
HETATM 31 C C32 A1AWW . . . F 2 -1.566 20.818 86.545 1 66.93 ? C32 A1AWW 301 B 1 
HETATM 32 C C33 A1AWW . . . F 2 -1.908 19.354 86.329 1 67.96 ? C33 A1AWW 301 B 1 
HETATM 33 C C34 A1AWW . . . F 2 -3.235 19.189 85.615 1 69.95 ? C34 A1AWW 301 B 1 
HETATM 34 C C35 A1AWW . . . F 2 -3.369 20.072 84.378 1 69.93 ? C35 A1AWW 301 B 1 
HETATM 35 C C36 A1AWW . . . F 2 -4.754 20.099 83.794 1 69.84 ? C36 A1AWW 301 B 1 
HETATM 36 C C37 A1AWW . . . F 2 -4.811 20.689 82.402 1 70.7 ? C37 A1AWW 301 B 1 
HETATM 37 C C38 A1AWW . . . F 2 -4.442 22.153 82.332 1 71.27 ? C38 A1AWW 301 B 1 
HETATM 38 C C39 A1AWW . . . F 2 -5.352 23.061 83.119 1 70.81 ? C39 A1AWW 301 B 1 
HETATM 39 N N40 A1AWW . . . F 2 -0.212 21.432 88.497 1 66.33 1 N40 A1AWW 301 B 1 
HETATM 40 O O41 A1AWW . . . F 2 0.04 20.556 89.297 1 67.07 -1 O41 A1AWW 301 B 1 
HETATM 41 O O42 A1AWW . . . F 2 -0.573 22.551 88.813 1 65.22 ? O42 A1AWW 301 B 1 
HETATM 42 C CG1 A1AWW . . . F 2 4.264 20.391 82.334 1 53.18 ? CG1 A1AWW 301 B 1 
HETATM 43 O O12 A1AWW . . . F 2 4.431 16.326 83.961 1 50.48 -1 O12 A1AWW 301 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           43 
#