data_8VOZ # _model_server_result.job_id OOoNns30kzg2xKI4nFszEA _model_server_result.datetime_utc '2024-12-26 22:15:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8voz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":803}' # _entry.id 8VOZ # _exptl.entry_id 8VOZ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 480.639 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxypropyl hexadecanoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8VOZ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VOZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 400 A THR 526 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc2 C O3B ADP . A ADP 801 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc3 B OG1 THR 400 B THR 526 1_555 G MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? metalc ? metalc4 F O2B ADP . B ADP 801 1_555 G MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? # _chem_comp.formula 'C24 H51 N O6 P 1' _chem_comp.formula_weight 480.639 _chem_comp.id A1ACX _chem_comp.mon_nstd_flag . _chem_comp.name '3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxypropyl hexadecanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C31 N29 A1ACX sing 1 n n C32 N29 A1ACX sing 2 n n N29 C28 A1ACX sing 3 n n N29 C30 A1ACX sing 4 n n C28 C27 A1ACX sing 5 n n C27 O26 A1ACX sing 6 n n O26 P23 A1ACX sing 7 n n O25 P23 A1ACX doub 8 n n P23 O22 A1ACX sing 9 n n P23 O24 A1ACX sing 10 n n O22 C21 A1ACX sing 11 n n C20 C21 A1ACX sing 12 n n C20 C19 A1ACX sing 13 n n C19 O18 A1ACX sing 14 n n O18 C16 A1ACX sing 15 n n O17 C16 A1ACX doub 16 n n C16 C15 A1ACX sing 17 n n C15 C14 A1ACX sing 18 n n C14 C13 A1ACX sing 19 n n C13 C12 A1ACX sing 20 n n C12 C11 A1ACX sing 21 n n C11 C10 A1ACX sing 22 n n C10 C09 A1ACX sing 23 n n C09 C08 A1ACX sing 24 n n C08 C07 A1ACX sing 25 n n C07 C06 A1ACX sing 26 n n C06 C05 A1ACX sing 27 n n C05 C04 A1ACX sing 28 n n C03 C04 A1ACX sing 29 n n C03 C02 A1ACX sing 30 n n C01 C02 A1ACX sing 31 n n C10 H1 A1ACX sing 32 n n C10 H2 A1ACX sing 33 n n C01 H3 A1ACX sing 34 n n C01 H4 A1ACX sing 35 n n C01 H5 A1ACX sing 36 n n C02 H6 A1ACX sing 37 n n C02 H7 A1ACX sing 38 n n C03 H8 A1ACX sing 39 n n C03 H9 A1ACX sing 40 n n C04 H10 A1ACX sing 41 n n C04 H11 A1ACX sing 42 n n C05 H12 A1ACX sing 43 n n C05 H13 A1ACX sing 44 n n C06 H14 A1ACX sing 45 n n C06 H15 A1ACX sing 46 n n C07 H16 A1ACX sing 47 n n C07 H17 A1ACX sing 48 n n C08 H18 A1ACX sing 49 n n C08 H19 A1ACX sing 50 n n C09 H20 A1ACX sing 51 n n C09 H21 A1ACX sing 52 n n C11 H22 A1ACX sing 53 n n C11 H23 A1ACX sing 54 n n C12 H24 A1ACX sing 55 n n C12 H25 A1ACX sing 56 n n C13 H26 A1ACX sing 57 n n C13 H27 A1ACX sing 58 n n C14 H28 A1ACX sing 59 n n C14 H29 A1ACX sing 60 n n C15 H30 A1ACX sing 61 n n C15 H31 A1ACX sing 62 n n C19 H32 A1ACX sing 63 n n C19 H33 A1ACX sing 64 n n C20 H34 A1ACX sing 65 n n C20 H35 A1ACX sing 66 n n C21 H36 A1ACX sing 67 n n C21 H37 A1ACX sing 68 n n C27 H38 A1ACX sing 69 n n C27 H39 A1ACX sing 70 n n C28 H40 A1ACX sing 71 n n C28 H41 A1ACX sing 72 n n C30 H42 A1ACX sing 73 n n C30 H43 A1ACX sing 74 n n C30 H44 A1ACX sing 75 n n C31 H45 A1ACX sing 76 n n C31 H46 A1ACX sing 77 n n C31 H47 A1ACX sing 78 n n C32 H48 A1ACX sing 79 n n C32 H49 A1ACX sing 80 n n C32 H50 A1ACX sing 81 n n O24 H51 A1ACX sing 82 n n # _atom_sites.entry_id 8VOZ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ADP A 1 801 801 ADP ADP . D 3 MG A 1 802 802 MG MG . E 4 A1ACX A 1 803 803 A1ACX FAA . F 2 ADP B 1 801 801 ADP ADP . G 3 MG B 1 802 802 MG MG . H 5 POV B 1 803 803 POV EPC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 A1ACX . . . E 4 135.952 104.614 88.352 1 45.56 ? C10 A1ACX 803 A 1 HETATM 2 C C01 A1ACX . . . E 4 137.63 110.134 94.872 1 51.34 ? C01 A1ACX 803 A 1 HETATM 3 C C02 A1ACX . . . E 4 136.108 110.029 94.912 1 50.86 ? C02 A1ACX 803 A 1 HETATM 4 C C03 A1ACX . . . E 4 135.503 109.927 93.514 1 53.89 ? C03 A1ACX 803 A 1 HETATM 5 C C04 A1ACX . . . E 4 134.213 109.111 93.499 1 49.93 ? C04 A1ACX 803 A 1 HETATM 6 C C05 A1ACX . . . E 4 133.912 108.555 92.111 1 43.72 ? C05 A1ACX 803 A 1 HETATM 7 C C06 A1ACX . . . E 4 133.795 107.034 92.128 1 51.05 ? C06 A1ACX 803 A 1 HETATM 8 C C07 A1ACX . . . E 4 133.81 106.437 90.724 1 48.07 ? C07 A1ACX 803 A 1 HETATM 9 C C08 A1ACX . . . E 4 134.968 105.462 90.533 1 47.01 ? C08 A1ACX 803 A 1 HETATM 10 C C09 A1ACX . . . E 4 134.77 104.565 89.316 1 47.27 ? C09 A1ACX 803 A 1 HETATM 11 C C11 A1ACX . . . E 4 135.832 103.539 87.276 1 50.44 ? C11 A1ACX 803 A 1 HETATM 12 C C12 A1ACX . . . E 4 135.832 104.11 85.86 1 52.02 ? C12 A1ACX 803 A 1 HETATM 13 C C13 A1ACX . . . E 4 135.363 103.071 84.844 1 49.01 ? C13 A1ACX 803 A 1 HETATM 14 C C14 A1ACX . . . E 4 134.993 103.686 83.497 1 50.64 ? C14 A1ACX 803 A 1 HETATM 15 C C15 A1ACX . . . E 4 134.392 102.654 82.547 1 52.54 ? C15 A1ACX 803 A 1 HETATM 16 C C16 A1ACX . . . E 4 134.436 103.089 81.083 1 57.18 ? C16 A1ACX 803 A 1 HETATM 17 C C19 A1ACX . . . E 4 133.275 101.211 80.32 1 49.96 ? C19 A1ACX 803 A 1 HETATM 18 C C20 A1ACX . . . E 4 133.602 99.916 79.584 1 51.58 ? C20 A1ACX 803 A 1 HETATM 19 C C21 A1ACX . . . E 4 132.423 99.41 78.757 1 55.49 ? C21 A1ACX 803 A 1 HETATM 20 C C27 A1ACX . . . E 4 133.003 97.809 74.178 1 51.68 ? C27 A1ACX 803 A 1 HETATM 21 C C28 A1ACX . . . E 4 133.964 98.996 74.122 1 55.08 ? C28 A1ACX 803 A 1 HETATM 22 C C30 A1ACX . . . E 4 136.137 99.747 73.562 1 56.98 ? C30 A1ACX 803 A 1 HETATM 23 C C31 A1ACX . . . E 4 135.264 97.814 72.511 1 53.33 ? C31 A1ACX 803 A 1 HETATM 24 C C32 A1ACX . . . E 4 135.866 97.749 74.804 1 51.81 ? C32 A1ACX 803 A 1 HETATM 25 N N29 A1ACX . . . E 4 135.304 98.574 73.749 1 61.22 ? N29 A1ACX 803 A 1 HETATM 26 O O17 A1ACX . . . E 4 134.574 104.232 80.801 1 53.57 ? O17 A1ACX 803 A 1 HETATM 27 O O18 A1ACX . . . E 4 134.302 102.128 80.077 1 55.47 ? O18 A1ACX 803 A 1 HETATM 28 O O22 A1ACX . . . E 4 132.87 99.153 77.457 1 62.45 ? O22 A1ACX 803 A 1 HETATM 29 O O24 A1ACX . . . E 4 131.115 97.269 77.41 1 55.22 ? O24 A1ACX 803 A 1 HETATM 30 O O25 A1ACX . . . E 4 133.442 96.724 76.809 1 60.04 ? O25 A1ACX 803 A 1 HETATM 31 O O26 A1ACX . . . E 4 132.021 98.079 75.137 1 57.4 ? O26 A1ACX 803 A 1 HETATM 32 P P23 A1ACX . . . E 4 132.36 97.772 76.72 1 76.62 ? P23 A1ACX 803 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 707 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 32 #