data_8VQ0 # _model_server_result.job_id xf7ChZTsNog8SloxhR7UHA _model_server_result.datetime_utc '2024-10-12 19:24:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vq0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 8VQ0 # _exptl.entry_id 8VQ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 32.042 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description METHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.77 _cell.angle_gamma 90 _cell.entry_id 8VQ0 _cell.length_a 58.356 _cell.length_b 8.78 _cell.length_c 44.935 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VQ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C16 A1ADF 1 A A1ADF 1 1_555 A N ALA 2 A ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 ? covale ? covale2 A C ALA 2 A ALA 2 1_555 A N AIB 3 A AIB 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C AIB 3 A AIB 3 1_555 A N ALA 4 A ALA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C ALA 4 A ALA 4 1_555 A N AIB 5 A AIB 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 A C AIB 5 A AIB 5 1_555 A N LEU 6 A LEU 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale6 A C LEU 6 A LEU 6 1_555 A N AIB 7 A AIB 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 A C AIB 7 A AIB 7 1_555 A N ALA 8 A ALA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale8 A C ALA 8 A ALA 8 1_555 A N AIB 9 A AIB 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale9 A C AIB 9 A AIB 9 1_555 A N LEU 10 A LEU 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale10 A C LEU 10 A LEU 10 1_555 A N AIB 11 A AIB 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale11 A C AIB 11 A AIB 11 1_555 A N GLN 12 A GLN 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale12 A C GLN 12 A GLN 12 1_555 A N AIB 13 A AIB 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale13 A C AIB 13 A AIB 13 1_555 A N LEU 14 A LEU 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale14 A C LEU 14 A LEU 14 1_555 A N15 I77 15 A I77 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? covale ? covale15 B C16 A1ADF 1 B A1ADF 1 1_555 B N ALA 2 B ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 ? covale ? covale16 B C ALA 2 B ALA 2 1_555 B N AIB 3 B AIB 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale17 B C AIB 3 B AIB 3 1_555 B N ALA 4 B ALA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale18 B C ALA 4 B ALA 4 1_555 B N AIB 5 B AIB 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale19 B C AIB 5 B AIB 5 1_555 B N LEU 6 B LEU 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale20 B C LEU 6 B LEU 6 1_555 B N AIB 7 B AIB 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale21 B C AIB 7 B AIB 7 1_555 B N ALA 8 B ALA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale22 B C ALA 8 B ALA 8 1_555 B N AIB 9 B AIB 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale23 B C AIB 9 B AIB 9 1_555 B N LEU 10 B LEU 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale24 B C LEU 10 B LEU 10 1_555 B N AIB 11 B AIB 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale25 B C AIB 11 B AIB 11 1_555 B N GLN 12 B GLN 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale26 B C GLN 12 B GLN 12 1_555 B N AIB 13 B AIB 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale27 B C AIB 13 B AIB 13 1_555 B N LEU 14 B LEU 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale28 B C LEU 14 B LEU 14 1_555 B N15 I77 15 B I77 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.423 ? # _chem_comp.formula 'C H4 O' _chem_comp.formula_weight 32.042 _chem_comp.id MOH _chem_comp.mon_nstd_flag . _chem_comp.name METHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O MOH sing 137 n n C H1 MOH sing 138 n n C H2 MOH sing 139 n n C H3 MOH sing 140 n n O HO MOH sing 141 n n # _atom_sites.entry_id 8VQ0 _atom_sites.fract_transf_matrix[1][1] 0.017136 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005492 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.113895 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023369 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MOH A 1 101 10 MOH MOH . D 3 HOH A 1 201 3 HOH HOH . D 3 HOH A 2 202 2 HOH HOH . D 3 HOH A 3 203 5 HOH HOH . D 3 HOH A 4 204 7 HOH HOH . D 3 HOH A 5 205 8 HOH HOH . D 3 HOH A 6 206 9 HOH HOH . E 3 HOH B 1 101 4 HOH HOH . E 3 HOH B 2 102 1 HOH HOH . E 3 HOH B 3 103 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C MOH . . . C 2 -16.147 -7.623 -6.593 1 25.18 ? C MOH 101 A 1 HETATM 2 O O MOH . . . C 2 -14.952 -7.824 -7.321 1 21.44 ? O MOH 101 A 1 HETATM 3 H H1 MOH . . . C 2 -16.922 -7.738 -7.164 1 30.57 ? H1 MOH 101 A 1 HETATM 4 H H2 MOH . . . C 2 -16.164 -6.745 -6.185 1 30.57 ? H2 MOH 101 A 1 HETATM 5 H H3 MOH . . . C 2 -16.139 -8.31 -5.907 1 30.57 ? H3 MOH 101 A 1 HETATM 6 H HO MOH . . . C 2 -14.883 -8.66 -7.457 1 26.08 ? HO MOH 101 A 1 # _model_server_stats.io_time_ms 95 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #