data_8VQ1 # _model_server_result.job_id NDKLTM5bs37LQRlivPaR_A _model_server_result.datetime_utc '2024-10-18 05:21:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vq1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8VQ1 # _exptl.entry_id 8VQ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.135 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(4-nitrophenyl)methanimine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.883 _cell.angle_gamma 90 _cell.entry_id 8VQ1 _cell.length_a 72.136 _cell.length_b 59.758 _cell.length_c 56.11 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VQ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 104 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 101 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id QCV _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id QCV _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id A _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id A _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.768 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C7 H6 N2 O2' _chem_comp.formula_weight 150.135 _chem_comp.id QCV _chem_comp.mon_nstd_flag . _chem_comp.name N-(4-nitrophenyl)methanimine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 N2 QCV sing 277 n n N2 O1 QCV doub 278 n n N2 C5 QCV sing 279 n n C4 C5 QCV doub 280 n y C4 C3 QCV sing 281 n y C5 C6 QCV sing 282 n y C3 C2 QCV doub 283 n y C6 C7 QCV doub 284 n y C2 C7 QCV sing 285 n y C2 N1 QCV sing 286 n n N1 C1 QCV doub 287 n n C1 H1 QCV sing 288 n n C1 H2 QCV sing 289 n n C3 H3 QCV sing 290 n n C4 H4 QCV sing 291 n n C6 H6 QCV sing 292 n n C7 H7 QCV sing 293 n n # _atom_sites.entry_id 8VQ1 _atom_sites.fract_transf_matrix[1][1] 0.013863 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006726 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016734 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019809 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QCV A 1 301 301 QCV QCV . C 3 CL A 1 302 1 CL CL . D 4 HOH A 1 401 49 HOH HOH . D 4 HOH A 2 402 8 HOH HOH . D 4 HOH A 3 403 9 HOH HOH . D 4 HOH A 4 404 6 HOH HOH . D 4 HOH A 5 405 12 HOH HOH . D 4 HOH A 6 406 11 HOH HOH . D 4 HOH A 7 407 17 HOH HOH . D 4 HOH A 8 408 7 HOH HOH . D 4 HOH A 9 409 22 HOH HOH . D 4 HOH A 10 410 18 HOH HOH . D 4 HOH A 11 411 154 HOH HOH . D 4 HOH A 12 412 15 HOH HOH . D 4 HOH A 13 413 39 HOH HOH . D 4 HOH A 14 414 20 HOH HOH . D 4 HOH A 15 415 23 HOH HOH . D 4 HOH A 16 416 26 HOH HOH . D 4 HOH A 17 417 51 HOH HOH . D 4 HOH A 18 418 46 HOH HOH . D 4 HOH A 19 419 14 HOH HOH . D 4 HOH A 20 420 10 HOH HOH . D 4 HOH A 21 421 28 HOH HOH . D 4 HOH A 22 422 25 HOH HOH . D 4 HOH A 23 423 144 HOH HOH . D 4 HOH A 24 424 21 HOH HOH . D 4 HOH A 25 425 152 HOH HOH . D 4 HOH A 26 426 146 HOH HOH . D 4 HOH A 27 427 4 HOH HOH . D 4 HOH A 28 428 32 HOH HOH . D 4 HOH A 29 429 29 HOH HOH . D 4 HOH A 30 430 31 HOH HOH . D 4 HOH A 31 431 34 HOH HOH . D 4 HOH A 32 432 36 HOH HOH . D 4 HOH A 33 433 13 HOH HOH . D 4 HOH A 34 434 38 HOH HOH . D 4 HOH A 35 435 24 HOH HOH . D 4 HOH A 36 436 37 HOH HOH . D 4 HOH A 37 437 50 HOH HOH . D 4 HOH A 38 438 64 HOH HOH . D 4 HOH A 39 439 52 HOH HOH . D 4 HOH A 40 440 30 HOH HOH . D 4 HOH A 41 441 145 HOH HOH . D 4 HOH A 42 442 151 HOH HOH . D 4 HOH A 43 443 41 HOH HOH . D 4 HOH A 44 444 147 HOH HOH . D 4 HOH A 45 445 40 HOH HOH . D 4 HOH A 46 446 27 HOH HOH . D 4 HOH A 47 447 148 HOH HOH . D 4 HOH A 48 448 33 HOH HOH . D 4 HOH A 49 449 48 HOH HOH . D 4 HOH A 50 450 59 HOH HOH . D 4 HOH A 51 451 35 HOH HOH . D 4 HOH A 52 452 74 HOH HOH . D 4 HOH A 53 453 56 HOH HOH . D 4 HOH A 54 454 44 HOH HOH . D 4 HOH A 55 455 136 HOH HOH . D 4 HOH A 56 456 53 HOH HOH . D 4 HOH A 57 457 3 HOH HOH . D 4 HOH A 58 458 70 HOH HOH . D 4 HOH A 59 459 42 HOH HOH . D 4 HOH A 60 460 47 HOH HOH . D 4 HOH A 61 461 69 HOH HOH . D 4 HOH A 62 462 62 HOH HOH . D 4 HOH A 63 463 143 HOH HOH . D 4 HOH A 64 464 45 HOH HOH . D 4 HOH A 65 465 19 HOH HOH . D 4 HOH A 66 466 66 HOH HOH . D 4 HOH A 67 467 106 HOH HOH . D 4 HOH A 68 468 55 HOH HOH . D 4 HOH A 69 469 65 HOH HOH . D 4 HOH A 70 470 57 HOH HOH . D 4 HOH A 71 471 149 HOH HOH . D 4 HOH A 72 472 54 HOH HOH . D 4 HOH A 73 473 60 HOH HOH . D 4 HOH A 74 474 61 HOH HOH . D 4 HOH A 75 475 58 HOH HOH . D 4 HOH A 76 476 72 HOH HOH . D 4 HOH A 77 477 68 HOH HOH . D 4 HOH A 78 478 78 HOH HOH . D 4 HOH A 79 479 88 HOH HOH . D 4 HOH A 80 480 73 HOH HOH . D 4 HOH A 81 481 82 HOH HOH . D 4 HOH A 82 482 89 HOH HOH . D 4 HOH A 83 483 75 HOH HOH . D 4 HOH A 84 484 80 HOH HOH . D 4 HOH A 85 485 67 HOH HOH . D 4 HOH A 86 486 77 HOH HOH . D 4 HOH A 87 487 5 HOH HOH . D 4 HOH A 88 488 141 HOH HOH . D 4 HOH A 89 489 79 HOH HOH . D 4 HOH A 90 490 76 HOH HOH . D 4 HOH A 91 491 84 HOH HOH . D 4 HOH A 92 492 63 HOH HOH . D 4 HOH A 93 493 87 HOH HOH . D 4 HOH A 94 494 81 HOH HOH . D 4 HOH A 95 495 90 HOH HOH . D 4 HOH A 96 496 91 HOH HOH . D 4 HOH A 97 497 98 HOH HOH . D 4 HOH A 98 498 85 HOH HOH . D 4 HOH A 99 499 110 HOH HOH . D 4 HOH A 100 500 71 HOH HOH . D 4 HOH A 101 501 93 HOH HOH . D 4 HOH A 102 502 43 HOH HOH . D 4 HOH A 103 503 100 HOH HOH . D 4 HOH A 104 504 103 HOH HOH . D 4 HOH A 105 505 97 HOH HOH . D 4 HOH A 106 506 104 HOH HOH . D 4 HOH A 107 507 95 HOH HOH . D 4 HOH A 108 508 86 HOH HOH . D 4 HOH A 109 509 94 HOH HOH . D 4 HOH A 110 510 101 HOH HOH . D 4 HOH A 111 511 92 HOH HOH . D 4 HOH A 112 512 102 HOH HOH . D 4 HOH A 113 513 99 HOH HOH . D 4 HOH A 114 514 153 HOH HOH . D 4 HOH A 115 515 108 HOH HOH . D 4 HOH A 116 516 142 HOH HOH . D 4 HOH A 117 517 96 HOH HOH . D 4 HOH A 118 518 105 HOH HOH . D 4 HOH A 119 519 112 HOH HOH . D 4 HOH A 120 520 109 HOH HOH . D 4 HOH A 121 521 107 HOH HOH . D 4 HOH A 122 522 111 HOH HOH . D 4 HOH A 123 523 114 HOH HOH . D 4 HOH A 124 524 150 HOH HOH . D 4 HOH A 125 525 118 HOH HOH . D 4 HOH A 126 526 83 HOH HOH . D 4 HOH A 127 527 113 HOH HOH . D 4 HOH A 128 528 115 HOH HOH . D 4 HOH A 129 529 1 HOH HOH . D 4 HOH A 130 530 117 HOH HOH . D 4 HOH A 131 531 121 HOH HOH . D 4 HOH A 132 532 120 HOH HOH . D 4 HOH A 133 533 116 HOH HOH . D 4 HOH A 134 534 119 HOH HOH . D 4 HOH A 135 535 124 HOH HOH . D 4 HOH A 136 536 125 HOH HOH . D 4 HOH A 137 537 140 HOH HOH . D 4 HOH A 138 538 123 HOH HOH . D 4 HOH A 139 539 126 HOH HOH . D 4 HOH A 140 540 128 HOH HOH . D 4 HOH A 141 541 16 HOH HOH . D 4 HOH A 142 542 127 HOH HOH . D 4 HOH A 143 543 122 HOH HOH . D 4 HOH A 144 544 131 HOH HOH . D 4 HOH A 145 545 130 HOH HOH . D 4 HOH A 146 546 129 HOH HOH . D 4 HOH A 147 547 132 HOH HOH . D 4 HOH A 148 548 133 HOH HOH . D 4 HOH A 149 549 2 HOH HOH . D 4 HOH A 150 550 137 HOH HOH . D 4 HOH A 151 551 139 HOH HOH . D 4 HOH A 152 552 134 HOH HOH . D 4 HOH A 153 553 138 HOH HOH . D 4 HOH A 154 554 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 QCV . A . B 2 10.208 -9.685 7.297 0.53 16.55 ? C1 QCV 301 A 1 HETATM 2 C C2 QCV . A . B 2 12.014 -9.879 5.887 0.53 16.11 ? C2 QCV 301 A 1 HETATM 3 C C3 QCV . A . B 2 13.06 -9.894 6.809 0.53 18.09 ? C3 QCV 301 A 1 HETATM 4 O O1 QCV . A . B 2 15.715 -12.022 3.605 0.53 22.22 ? O1 QCV 301 A 1 HETATM 5 O O2 QCV . A . B 2 16.531 -11.761 5.545 0.53 24.08 ? O2 QCV 301 A 1 HETATM 6 C C4 QCV . A . B 2 14.247 -10.479 6.443 0.53 19.35 ? C4 QCV 301 A 1 HETATM 7 C C5 QCV . A . B 2 14.373 -11.018 5.168 0.53 18.93 ? C5 QCV 301 A 1 HETATM 8 C C6 QCV . A . B 2 13.322 -10.991 4.247 0.53 18.18 ? C6 QCV 301 A 1 HETATM 9 C C7 QCV . A . B 2 12.13 -10.412 4.617 0.53 17.54 ? C7 QCV 301 A 1 HETATM 10 N N1 QCV . A . B 2 10.76 -9.269 6.225 0.53 17.14 ? N1 QCV 301 A 1 HETATM 11 N N2 QCV . A . B 2 15.64 -11.657 4.727 0.53 20.67 ? N2 QCV 301 A 1 HETATM 12 H H2 QCV . A . B 2 9.27 -9.238 7.573 0.53 19.85 ? H2 QCV 301 A 1 HETATM 13 H H3 QCV . A . B 2 12.935 -9.449 7.803 0.53 21.7 ? H3 QCV 301 A 1 HETATM 14 H H4 QCV . A . B 2 15.086 -10.515 7.163 0.53 23.21 ? H4 QCV 301 A 1 HETATM 15 H H6 QCV . A . B 2 13.418 -11.417 3.237 0.53 21.81 ? H6 QCV 301 A 1 HETATM 16 H H7 QCV . A . B 2 11.285 -10.373 3.918 0.53 21.03 ? H7 QCV 301 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #