data_8VSG # _model_server_result.job_id sJGloYBGLcbkR85DUq2gkA _model_server_result.datetime_utc '2024-11-08 17:47:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vsg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 8VSG # _exptl.entry_id 8VSG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.24 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8VSG _cell.length_a 102.299 _cell.length_b 103.523 _cell.length_c 67.835 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VSG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 145 A CYS 145 1_555 D C15 A1AD0 . A A1AD0 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? covale ? covale2 B SG CYS 145 B CYS 145 1_555 P C15 A1AD0 . B A1AD0 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.803 ? # _chem_comp.formula 'C8 H19 N O5' _chem_comp.formula_weight 209.24 _chem_comp.id BTB _chem_comp.mon_nstd_flag . _chem_comp.name 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'BIS-TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BTB sing 139 n n C1 C2 BTB sing 140 n n C1 H11 BTB sing 141 n n C1 H12 BTB sing 142 n n O1 HO1 BTB sing 143 n n C2 C3 BTB sing 144 n n C2 C4 BTB sing 145 n n C2 N BTB sing 146 n n C3 O3 BTB sing 147 n n C3 H31 BTB sing 148 n n C3 H32 BTB sing 149 n n O3 HO3 BTB sing 150 n n C4 O4 BTB sing 151 n n C4 H41 BTB sing 152 n n C4 H42 BTB sing 153 n n O4 HO4 BTB sing 154 n n N C5 BTB sing 155 n n N C7 BTB sing 156 n n C5 C6 BTB sing 157 n n C5 H51 BTB sing 158 n n C5 H52 BTB sing 159 n n C6 O6 BTB sing 160 n n C6 H61 BTB sing 161 n n C6 H62 BTB sing 162 n n O6 HO6 BTB sing 163 n n C7 C8 BTB sing 164 n n C7 H71 BTB sing 165 n n C7 H72 BTB sing 166 n n C8 O8 BTB sing 167 n n C8 H81 BTB sing 168 n n C8 H82 BTB sing 169 n n O8 HO8 BTB sing 170 n n # _atom_sites.entry_id 8VSG _atom_sites.fract_transf_matrix[1][1] 0.009775 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00966 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BTB A 1 401 502 BTB BTB . D 3 A1AD0 A 1 402 900 A1AD0 LIG . E 4 DMS A 1 403 901 DMS DMS . F 4 DMS A 1 404 902 DMS DMS . G 4 DMS A 1 405 903 DMS DMS . H 4 DMS A 1 406 905 DMS DMS . I 4 DMS A 1 407 906 DMS DMS . J 4 DMS A 1 408 907 DMS DMS . K 4 DMS A 1 409 908 DMS DMS . L 4 DMS A 1 410 905 DMS DMS . M 5 EDO A 1 411 501 EDO EDO . N 5 EDO A 1 412 502 EDO EDO . O 4 DMS B 1 401 909 DMS DMS . P 3 A1AD0 B 1 402 900 A1AD0 LIG . Q 4 DMS B 1 403 901 DMS DMS . R 4 DMS B 1 404 902 DMS DMS . S 4 DMS B 1 405 904 DMS DMS . T 4 DMS B 1 406 906 DMS DMS . U 6 HOH A 1 501 171 HOH HOH . U 6 HOH A 2 502 186 HOH HOH . U 6 HOH A 3 503 147 HOH HOH . U 6 HOH A 4 504 126 HOH HOH . U 6 HOH A 5 505 13 HOH HOH . U 6 HOH A 6 506 33 HOH HOH . U 6 HOH A 7 507 113 HOH HOH . U 6 HOH A 8 508 176 HOH HOH . U 6 HOH A 9 509 67 HOH HOH . U 6 HOH A 10 510 75 HOH HOH . U 6 HOH A 11 511 18 HOH HOH . U 6 HOH A 12 512 137 HOH HOH . U 6 HOH A 13 513 73 HOH HOH . U 6 HOH A 14 514 41 HOH HOH . U 6 HOH A 15 515 59 HOH HOH . U 6 HOH A 16 516 49 HOH HOH . U 6 HOH A 17 517 50 HOH HOH . U 6 HOH A 18 518 131 HOH HOH . U 6 HOH A 19 519 162 HOH HOH . U 6 HOH A 20 520 29 HOH HOH . U 6 HOH A 21 521 85 HOH HOH . U 6 HOH A 22 522 71 HOH HOH . U 6 HOH A 23 523 16 HOH HOH . U 6 HOH A 24 524 7 HOH HOH . U 6 HOH A 25 525 38 HOH HOH . U 6 HOH A 26 526 91 HOH HOH . U 6 HOH A 27 527 160 HOH HOH . U 6 HOH A 28 528 134 HOH HOH . U 6 HOH A 29 529 64 HOH HOH . U 6 HOH A 30 530 118 HOH HOH . U 6 HOH A 31 531 123 HOH HOH . U 6 HOH A 32 532 166 HOH HOH . U 6 HOH A 33 533 77 HOH HOH . U 6 HOH A 34 534 156 HOH HOH . U 6 HOH A 35 535 4 HOH HOH . U 6 HOH A 36 536 192 HOH HOH . U 6 HOH A 37 537 132 HOH HOH . U 6 HOH A 38 538 84 HOH HOH . U 6 HOH A 39 539 125 HOH HOH . U 6 HOH A 40 540 155 HOH HOH . U 6 HOH A 41 541 140 HOH HOH . U 6 HOH A 42 542 22 HOH HOH . U 6 HOH A 43 543 42 HOH HOH . U 6 HOH A 44 544 139 HOH HOH . U 6 HOH A 45 545 117 HOH HOH . U 6 HOH A 46 546 26 HOH HOH . U 6 HOH A 47 547 27 HOH HOH . U 6 HOH A 48 548 80 HOH HOH . U 6 HOH A 49 549 169 HOH HOH . U 6 HOH A 50 550 172 HOH HOH . U 6 HOH A 51 551 130 HOH HOH . U 6 HOH A 52 552 55 HOH HOH . U 6 HOH A 53 553 174 HOH HOH . U 6 HOH A 54 554 72 HOH HOH . U 6 HOH A 55 555 15 HOH HOH . U 6 HOH A 56 556 195 HOH HOH . U 6 HOH A 57 557 81 HOH HOH . U 6 HOH A 58 558 189 HOH HOH . U 6 HOH A 59 559 69 HOH HOH . U 6 HOH A 60 560 154 HOH HOH . U 6 HOH A 61 561 193 HOH HOH . U 6 HOH A 62 562 144 HOH HOH . U 6 HOH A 63 563 101 HOH HOH . U 6 HOH A 64 564 52 HOH HOH . U 6 HOH A 65 565 179 HOH HOH . U 6 HOH A 66 566 153 HOH HOH . V 6 HOH B 1 501 161 HOH HOH . V 6 HOH B 2 502 20 HOH HOH . V 6 HOH B 3 503 19 HOH HOH . V 6 HOH B 4 504 109 HOH HOH . V 6 HOH B 5 505 83 HOH HOH . V 6 HOH B 6 506 105 HOH HOH . V 6 HOH B 7 507 159 HOH HOH . V 6 HOH B 8 508 31 HOH HOH . V 6 HOH B 9 509 203 HOH HOH . V 6 HOH B 10 510 108 HOH HOH . V 6 HOH B 11 511 2 HOH HOH . V 6 HOH B 12 512 40 HOH HOH . V 6 HOH B 13 513 37 HOH HOH . V 6 HOH B 14 514 48 HOH HOH . V 6 HOH B 15 515 181 HOH HOH . V 6 HOH B 16 516 119 HOH HOH . V 6 HOH B 17 517 88 HOH HOH . V 6 HOH B 18 518 157 HOH HOH . V 6 HOH B 19 519 148 HOH HOH . V 6 HOH B 20 520 178 HOH HOH . V 6 HOH B 21 521 196 HOH HOH . V 6 HOH B 22 522 145 HOH HOH . V 6 HOH B 23 523 198 HOH HOH . V 6 HOH B 24 524 146 HOH HOH . V 6 HOH B 25 525 128 HOH HOH . V 6 HOH B 26 526 190 HOH HOH . V 6 HOH B 27 527 103 HOH HOH . V 6 HOH B 28 528 32 HOH HOH . V 6 HOH B 29 529 1 HOH HOH . V 6 HOH B 30 530 149 HOH HOH . V 6 HOH B 31 531 110 HOH HOH . V 6 HOH B 32 532 93 HOH HOH . V 6 HOH B 33 533 54 HOH HOH . V 6 HOH B 34 534 204 HOH HOH . V 6 HOH B 35 535 51 HOH HOH . V 6 HOH B 36 536 184 HOH HOH . V 6 HOH B 37 537 173 HOH HOH . V 6 HOH B 38 538 70 HOH HOH . V 6 HOH B 39 539 96 HOH HOH . V 6 HOH B 40 540 89 HOH HOH . V 6 HOH B 41 541 14 HOH HOH . V 6 HOH B 42 542 120 HOH HOH . V 6 HOH B 43 543 11 HOH HOH . V 6 HOH B 44 544 114 HOH HOH . V 6 HOH B 45 545 168 HOH HOH . V 6 HOH B 46 546 122 HOH HOH . V 6 HOH B 47 547 53 HOH HOH . V 6 HOH B 48 548 127 HOH HOH . V 6 HOH B 49 549 164 HOH HOH . V 6 HOH B 50 550 97 HOH HOH . V 6 HOH B 51 551 82 HOH HOH . V 6 HOH B 52 552 163 HOH HOH . V 6 HOH B 53 553 56 HOH HOH . V 6 HOH B 54 554 34 HOH HOH . V 6 HOH B 55 555 65 HOH HOH . V 6 HOH B 56 556 62 HOH HOH . V 6 HOH B 57 557 58 HOH HOH . V 6 HOH B 58 558 194 HOH HOH . V 6 HOH B 59 559 3 HOH HOH . V 6 HOH B 60 560 92 HOH HOH . V 6 HOH B 61 561 121 HOH HOH . V 6 HOH B 62 562 90 HOH HOH . V 6 HOH B 63 563 78 HOH HOH . V 6 HOH B 64 564 133 HOH HOH . V 6 HOH B 65 565 170 HOH HOH . V 6 HOH B 66 566 63 HOH HOH . V 6 HOH B 67 567 158 HOH HOH . V 6 HOH B 68 568 66 HOH HOH . V 6 HOH B 69 569 94 HOH HOH . V 6 HOH B 70 570 99 HOH HOH . V 6 HOH B 71 571 104 HOH HOH . V 6 HOH B 72 572 47 HOH HOH . V 6 HOH B 73 573 165 HOH HOH . V 6 HOH B 74 574 60 HOH HOH . V 6 HOH B 75 575 107 HOH HOH . V 6 HOH B 76 576 183 HOH HOH . V 6 HOH B 77 577 30 HOH HOH . V 6 HOH B 78 578 68 HOH HOH . V 6 HOH B 79 579 175 HOH HOH . V 6 HOH B 80 580 180 HOH HOH . V 6 HOH B 81 581 79 HOH HOH . V 6 HOH B 82 582 102 HOH HOH . V 6 HOH B 83 583 151 HOH HOH . V 6 HOH B 84 584 112 HOH HOH . V 6 HOH B 85 585 135 HOH HOH . V 6 HOH B 86 586 202 HOH HOH . V 6 HOH B 87 587 57 HOH HOH . V 6 HOH B 88 588 150 HOH HOH . V 6 HOH B 89 589 201 HOH HOH . V 6 HOH B 90 590 191 HOH HOH . V 6 HOH B 91 591 21 HOH HOH . V 6 HOH B 92 592 124 HOH HOH . V 6 HOH B 93 593 115 HOH HOH . V 6 HOH B 94 594 177 HOH HOH . V 6 HOH B 95 595 182 HOH HOH . V 6 HOH B 96 596 45 HOH HOH . V 6 HOH B 97 597 87 HOH HOH . V 6 HOH B 98 598 100 HOH HOH . V 6 HOH B 99 599 141 HOH HOH . V 6 HOH B 100 600 43 HOH HOH . V 6 HOH B 101 601 152 HOH HOH . V 6 HOH B 102 602 5 HOH HOH . V 6 HOH B 103 603 76 HOH HOH . V 6 HOH B 104 604 142 HOH HOH . V 6 HOH B 105 605 46 HOH HOH . V 6 HOH B 106 606 199 HOH HOH . V 6 HOH B 107 607 35 HOH HOH . V 6 HOH B 108 608 61 HOH HOH . V 6 HOH B 109 609 188 HOH HOH . V 6 HOH B 110 610 136 HOH HOH . V 6 HOH B 111 611 74 HOH HOH . V 6 HOH B 112 612 36 HOH HOH . V 6 HOH B 113 613 44 HOH HOH . V 6 HOH B 114 614 95 HOH HOH . V 6 HOH B 115 615 129 HOH HOH . V 6 HOH B 116 616 187 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BTB . . . C 2 -8.219 13.93 -22.977 1 44.21 ? C1 BTB 401 A 1 HETATM 2 O O1 BTB . . . C 2 -9.5 13.473 -22.571 1 60.31 ? O1 BTB 401 A 1 HETATM 3 C C2 BTB . . . C 2 -7.611 14.796 -21.821 1 59.7 ? C2 BTB 401 A 1 HETATM 4 C C3 BTB . . . C 2 -8.255 16.224 -21.992 1 49.98 ? C3 BTB 401 A 1 HETATM 5 O O3 BTB . . . C 2 -7.987 16.85 -23.239 1 63.04 ? O3 BTB 401 A 1 HETATM 6 C C4 BTB . . . C 2 -6.061 14.858 -22.055 1 40.23 ? C4 BTB 401 A 1 HETATM 7 O O4 BTB . . . C 2 -5.424 15.895 -21.324 1 69.49 ? O4 BTB 401 A 1 HETATM 8 N N BTB . . . C 2 -7.996 14.179 -20.497 1 57.9 ? N BTB 401 A 1 HETATM 9 C C5 BTB . . . C 2 -7.521 12.78 -20.335 1 54.03 ? C5 BTB 401 A 1 HETATM 10 C C6 BTB . . . C 2 -8.21 11.973 -19.236 1 51.95 ? C6 BTB 401 A 1 HETATM 11 O O6 BTB . . . C 2 -9.607 12.173 -19.342 1 55.98 ? O6 BTB 401 A 1 HETATM 12 C C7 BTB . . . C 2 -7.583 14.977 -19.312 1 46.61 ? C7 BTB 401 A 1 HETATM 13 C C8 BTB . . . C 2 -8.631 15.013 -18.184 1 67.55 ? C8 BTB 401 A 1 HETATM 14 O O8 BTB . . . C 2 -9.893 15.085 -18.803 1 85.12 ? O8 BTB 401 A 1 HETATM 15 H H11 BTB . . . C 2 -8.301 14.47 -23.922 1 46.21 ? H11 BTB 401 A 1 HETATM 16 H H12 BTB . . . C 2 -7.592 13.065 -23.195 1 46.21 ? H12 BTB 401 A 1 HETATM 17 H HO1 BTB . . . C 2 -9.406 13.436 -21.619 1 62.31 ? HO1 BTB 401 A 1 HETATM 18 H H31 BTB . . . C 2 -7.923 16.939 -21.243 1 51.98 ? H31 BTB 401 A 1 HETATM 19 H H32 BTB . . . C 2 -9.334 16.152 -21.868 1 51.98 ? H32 BTB 401 A 1 HETATM 20 H HO3 BTB . . . C 2 -7.085 17.177 -23.221 1 65.04 ? HO3 BTB 401 A 1 HETATM 21 H H41 BTB . . . C 2 -5.859 15.05 -23.11 1 42.23 ? H41 BTB 401 A 1 HETATM 22 H H42 BTB . . . C 2 -5.582 13.903 -21.847 1 42.23 ? H42 BTB 401 A 1 HETATM 23 H HO4 BTB . . . C 2 -5.367 16.653 -21.909 1 71.49 ? HO4 BTB 401 A 1 HETATM 24 H H51 BTB . . . C 2 -6.448 12.752 -20.154 1 56.03 ? H51 BTB 401 A 1 HETATM 25 H H52 BTB . . . C 2 -7.665 12.204 -21.247 1 56.03 ? H52 BTB 401 A 1 HETATM 26 H H61 BTB . . . C 2 -7.849 12.257 -18.25 1 53.95 ? H61 BTB 401 A 1 HETATM 27 H H62 BTB . . . C 2 -7.98 10.912 -19.34 1 53.95 ? H62 BTB 401 A 1 HETATM 28 H HO6 BTB . . . C 2 -9.932 11.63 -20.067 1 57.98 ? HO6 BTB 401 A 1 HETATM 29 H H71 BTB . . . C 2 -7.389 16.013 -19.568 1 48.61 ? H71 BTB 401 A 1 HETATM 30 H H72 BTB . . . C 2 -6.622 14.633 -18.924 1 48.61 ? H72 BTB 401 A 1 HETATM 31 H H81 BTB . . . C 2 -8.48 15.879 -17.548 1 69.55 ? H81 BTB 401 A 1 HETATM 32 H H82 BTB . . . C 2 -8.584 14.138 -17.539 1 69.55 ? H82 BTB 401 A 1 HETATM 33 H HO8 BTB . . . C 2 -9.737 14.601 -19.609 1 87.12 ? HO8 BTB 401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 33 #