data_8VSK # _model_server_result.job_id OIz0b5UwCvBTuivgMPnkCw _model_server_result.datetime_utc '2024-11-27 18:28:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vsk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":204}' # _entry.id 8VSK # _exptl.entry_id 8VSK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8VSK _cell.length_a 57.171 _cell.length_b 66.182 _cell.length_c 69.063 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VSK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,M 1 1 B,G,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 I N N ? 7 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 89 AAA HIS 89 1_555 C FE HEM . AAA HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc2 C FE HEM . AAA HEM 201 1_555 D O2 OXY . AAA OXY 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc3 B NE2 HIS 89 BBB HIS 89 1_555 G FE HEM . BBB HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc4 G FE HEM . BBB HEM 201 1_555 N O HOH . BBB HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 333 n n C1 C2 PEG sing 334 n n C1 H11 PEG sing 335 n n C1 H12 PEG sing 336 n n O1 HO1 PEG sing 337 n n C2 O2 PEG sing 338 n n C2 H21 PEG sing 339 n n C2 H22 PEG sing 340 n n O2 C3 PEG sing 341 n n C3 C4 PEG sing 342 n n C3 H31 PEG sing 343 n n C3 H32 PEG sing 344 n n C4 O4 PEG sing 345 n n C4 H41 PEG sing 346 n n C4 H42 PEG sing 347 n n O4 HO4 PEG sing 348 n n # _atom_sites.entry_id 8VSK _atom_sites.fract_transf_matrix[1][1] 0.017491 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01511 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01448 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM AAA 1 201 139 HEM HEM . D 3 OXY AAA 1 202 140 OXY OXY . E 4 GOL AAA 1 203 141 GOL GOL . F 5 SO4 AAA 1 204 1 SO4 SO4 . G 2 HEM BBB 1 201 139 HEM HEM . H 6 Y8I BBB 1 202 140 Y8I Y8I . I 7 PEG BBB 1 203 141 PEG PEG . J 7 PEG BBB 1 204 142 PEG PEG . K 5 SO4 BBB 1 205 2 SO4 SO4 . L 5 SO4 BBB 1 206 3 SO4 SO4 . M 8 HOH AAA 1 301 157 HOH HOH . M 8 HOH AAA 2 302 142 HOH HOH . M 8 HOH AAA 3 303 32 HOH HOH . M 8 HOH AAA 4 304 50 HOH HOH . M 8 HOH AAA 5 305 174 HOH HOH . M 8 HOH AAA 6 306 119 HOH HOH . M 8 HOH AAA 7 307 20 HOH HOH . M 8 HOH AAA 8 308 170 HOH HOH . M 8 HOH AAA 9 309 165 HOH HOH . M 8 HOH AAA 10 310 102 HOH HOH . M 8 HOH AAA 11 311 74 HOH HOH . M 8 HOH AAA 12 312 223 HOH HOH . M 8 HOH AAA 13 313 162 HOH HOH . M 8 HOH AAA 14 314 36 HOH HOH . M 8 HOH AAA 15 315 90 HOH HOH . M 8 HOH AAA 16 316 7 HOH HOH . M 8 HOH AAA 17 317 110 HOH HOH . M 8 HOH AAA 18 318 91 HOH HOH . M 8 HOH AAA 19 319 137 HOH HOH . M 8 HOH AAA 20 320 201 HOH HOH . M 8 HOH AAA 21 321 67 HOH HOH . M 8 HOH AAA 22 322 147 HOH HOH . M 8 HOH AAA 23 323 150 HOH HOH . M 8 HOH AAA 24 324 104 HOH HOH . M 8 HOH AAA 25 325 11 HOH HOH . M 8 HOH AAA 26 326 215 HOH HOH . M 8 HOH AAA 27 327 76 HOH HOH . M 8 HOH AAA 28 328 27 HOH HOH . M 8 HOH AAA 29 329 129 HOH HOH . M 8 HOH AAA 30 330 112 HOH HOH . M 8 HOH AAA 31 331 125 HOH HOH . M 8 HOH AAA 32 332 82 HOH HOH . M 8 HOH AAA 33 333 217 HOH HOH . M 8 HOH AAA 34 334 121 HOH HOH . M 8 HOH AAA 35 335 97 HOH HOH . M 8 HOH AAA 36 336 141 HOH HOH . M 8 HOH AAA 37 337 213 HOH HOH . M 8 HOH AAA 38 338 18 HOH HOH . M 8 HOH AAA 39 339 60 HOH HOH . M 8 HOH AAA 40 340 68 HOH HOH . M 8 HOH AAA 41 341 52 HOH HOH . M 8 HOH AAA 42 342 105 HOH HOH . M 8 HOH AAA 43 343 135 HOH HOH . M 8 HOH AAA 44 344 219 HOH HOH . M 8 HOH AAA 45 345 31 HOH HOH . M 8 HOH AAA 46 346 86 HOH HOH . M 8 HOH AAA 47 347 184 HOH HOH . M 8 HOH AAA 48 348 40 HOH HOH . M 8 HOH AAA 49 349 24 HOH HOH . M 8 HOH AAA 50 350 95 HOH HOH . M 8 HOH AAA 51 351 6 HOH HOH . M 8 HOH AAA 52 352 77 HOH HOH . M 8 HOH AAA 53 353 57 HOH HOH . M 8 HOH AAA 54 354 185 HOH HOH . M 8 HOH AAA 55 355 167 HOH HOH . M 8 HOH AAA 56 356 72 HOH HOH . M 8 HOH AAA 57 357 84 HOH HOH . M 8 HOH AAA 58 358 111 HOH HOH . M 8 HOH AAA 59 359 4 HOH HOH . M 8 HOH AAA 60 360 120 HOH HOH . M 8 HOH AAA 61 361 48 HOH HOH . M 8 HOH AAA 62 362 127 HOH HOH . M 8 HOH AAA 63 363 214 HOH HOH . M 8 HOH AAA 64 364 73 HOH HOH . M 8 HOH AAA 65 365 98 HOH HOH . M 8 HOH AAA 66 366 164 HOH HOH . M 8 HOH AAA 67 367 39 HOH HOH . M 8 HOH AAA 68 368 224 HOH HOH . M 8 HOH AAA 69 369 211 HOH HOH . M 8 HOH AAA 70 370 8 HOH HOH . M 8 HOH AAA 71 371 43 HOH HOH . M 8 HOH AAA 72 372 66 HOH HOH . M 8 HOH AAA 73 373 133 HOH HOH . M 8 HOH AAA 74 374 34 HOH HOH . M 8 HOH AAA 75 375 10 HOH HOH . M 8 HOH AAA 76 376 146 HOH HOH . M 8 HOH AAA 77 377 49 HOH HOH . M 8 HOH AAA 78 378 181 HOH HOH . M 8 HOH AAA 79 379 38 HOH HOH . M 8 HOH AAA 80 380 216 HOH HOH . M 8 HOH AAA 81 381 96 HOH HOH . M 8 HOH AAA 82 382 16 HOH HOH . M 8 HOH AAA 83 383 130 HOH HOH . M 8 HOH AAA 84 384 155 HOH HOH . M 8 HOH AAA 85 385 113 HOH HOH . M 8 HOH AAA 86 386 44 HOH HOH . M 8 HOH AAA 87 387 99 HOH HOH . M 8 HOH AAA 88 388 22 HOH HOH . M 8 HOH AAA 89 389 156 HOH HOH . M 8 HOH AAA 90 390 124 HOH HOH . M 8 HOH AAA 91 391 158 HOH HOH . M 8 HOH AAA 92 392 194 HOH HOH . M 8 HOH AAA 93 393 221 HOH HOH . M 8 HOH AAA 94 394 78 HOH HOH . M 8 HOH AAA 95 395 154 HOH HOH . M 8 HOH AAA 96 396 134 HOH HOH . M 8 HOH AAA 97 397 178 HOH HOH . M 8 HOH AAA 98 398 202 HOH HOH . M 8 HOH AAA 99 399 196 HOH HOH . M 8 HOH AAA 100 400 92 HOH HOH . M 8 HOH AAA 101 401 65 HOH HOH . M 8 HOH AAA 102 402 126 HOH HOH . M 8 HOH AAA 103 403 197 HOH HOH . M 8 HOH AAA 104 404 54 HOH HOH . N 8 HOH BBB 1 301 227 HOH HOH . N 8 HOH BBB 2 302 188 HOH HOH . N 8 HOH BBB 3 303 180 HOH HOH . N 8 HOH BBB 4 304 140 HOH HOH . N 8 HOH BBB 5 305 233 HOH HOH . N 8 HOH BBB 6 306 58 HOH HOH . N 8 HOH BBB 7 307 149 HOH HOH . N 8 HOH BBB 8 308 206 HOH HOH . N 8 HOH BBB 9 309 101 HOH HOH . N 8 HOH BBB 10 310 169 HOH HOH . N 8 HOH BBB 11 311 1 HOH HOH . N 8 HOH BBB 12 312 131 HOH HOH . N 8 HOH BBB 13 313 109 HOH HOH . N 8 HOH BBB 14 314 192 HOH HOH . N 8 HOH BBB 15 315 195 HOH HOH . N 8 HOH BBB 16 316 83 HOH HOH . N 8 HOH BBB 17 317 231 HOH HOH . N 8 HOH BBB 18 318 45 HOH HOH . N 8 HOH BBB 19 319 161 HOH HOH . N 8 HOH BBB 20 320 179 HOH HOH . N 8 HOH BBB 21 321 143 HOH HOH . N 8 HOH BBB 22 322 28 HOH HOH . N 8 HOH BBB 23 323 115 HOH HOH . N 8 HOH BBB 24 324 59 HOH HOH . N 8 HOH BBB 25 325 108 HOH HOH . N 8 HOH BBB 26 326 198 HOH HOH . N 8 HOH BBB 27 327 118 HOH HOH . N 8 HOH BBB 28 328 228 HOH HOH . N 8 HOH BBB 29 329 89 HOH HOH . N 8 HOH BBB 30 330 116 HOH HOH . N 8 HOH BBB 31 331 114 HOH HOH . N 8 HOH BBB 32 332 138 HOH HOH . N 8 HOH BBB 33 333 168 HOH HOH . N 8 HOH BBB 34 334 175 HOH HOH . N 8 HOH BBB 35 335 163 HOH HOH . N 8 HOH BBB 36 336 144 HOH HOH . N 8 HOH BBB 37 337 139 HOH HOH . N 8 HOH BBB 38 338 13 HOH HOH . N 8 HOH BBB 39 339 30 HOH HOH . N 8 HOH BBB 40 340 220 HOH HOH . N 8 HOH BBB 41 341 25 HOH HOH . N 8 HOH BBB 42 342 187 HOH HOH . N 8 HOH BBB 43 343 160 HOH HOH . N 8 HOH BBB 44 344 218 HOH HOH . N 8 HOH BBB 45 345 123 HOH HOH . N 8 HOH BBB 46 346 26 HOH HOH . N 8 HOH BBB 47 347 37 HOH HOH . N 8 HOH BBB 48 348 151 HOH HOH . N 8 HOH BBB 49 349 100 HOH HOH . N 8 HOH BBB 50 350 3 HOH HOH . N 8 HOH BBB 51 351 117 HOH HOH . N 8 HOH BBB 52 352 15 HOH HOH . N 8 HOH BBB 53 353 106 HOH HOH . N 8 HOH BBB 54 354 47 HOH HOH . N 8 HOH BBB 55 355 69 HOH HOH . N 8 HOH BBB 56 356 152 HOH HOH . N 8 HOH BBB 57 357 35 HOH HOH . N 8 HOH BBB 58 358 62 HOH HOH . N 8 HOH BBB 59 359 193 HOH HOH . N 8 HOH BBB 60 360 166 HOH HOH . N 8 HOH BBB 61 361 14 HOH HOH . N 8 HOH BBB 62 362 53 HOH HOH . N 8 HOH BBB 63 363 5 HOH HOH . N 8 HOH BBB 64 364 33 HOH HOH . N 8 HOH BBB 65 365 29 HOH HOH . N 8 HOH BBB 66 366 19 HOH HOH . N 8 HOH BBB 67 367 56 HOH HOH . N 8 HOH BBB 68 368 88 HOH HOH . N 8 HOH BBB 69 369 80 HOH HOH . N 8 HOH BBB 70 370 171 HOH HOH . N 8 HOH BBB 71 371 229 HOH HOH . N 8 HOH BBB 72 372 182 HOH HOH . N 8 HOH BBB 73 373 225 HOH HOH . N 8 HOH BBB 74 374 71 HOH HOH . N 8 HOH BBB 75 375 61 HOH HOH . N 8 HOH BBB 76 376 85 HOH HOH . N 8 HOH BBB 77 377 204 HOH HOH . N 8 HOH BBB 78 378 21 HOH HOH . N 8 HOH BBB 79 379 17 HOH HOH . N 8 HOH BBB 80 380 41 HOH HOH . N 8 HOH BBB 81 381 12 HOH HOH . N 8 HOH BBB 82 382 222 HOH HOH . N 8 HOH BBB 83 383 132 HOH HOH . N 8 HOH BBB 84 384 93 HOH HOH . N 8 HOH BBB 85 385 103 HOH HOH . N 8 HOH BBB 86 386 46 HOH HOH . N 8 HOH BBB 87 387 64 HOH HOH . N 8 HOH BBB 88 388 191 HOH HOH . N 8 HOH BBB 89 389 212 HOH HOH . N 8 HOH BBB 90 390 136 HOH HOH . N 8 HOH BBB 91 391 230 HOH HOH . N 8 HOH BBB 92 392 70 HOH HOH . N 8 HOH BBB 93 393 176 HOH HOH . N 8 HOH BBB 94 394 75 HOH HOH . N 8 HOH BBB 95 395 42 HOH HOH . N 8 HOH BBB 96 396 236 HOH HOH . N 8 HOH BBB 97 397 159 HOH HOH . N 8 HOH BBB 98 398 232 HOH HOH . N 8 HOH BBB 99 399 87 HOH HOH . N 8 HOH BBB 100 400 235 HOH HOH . N 8 HOH BBB 101 401 81 HOH HOH . N 8 HOH BBB 102 402 209 HOH HOH . N 8 HOH BBB 103 403 203 HOH HOH . N 8 HOH BBB 104 404 148 HOH HOH . N 8 HOH BBB 105 405 234 HOH HOH . N 8 HOH BBB 106 406 145 HOH HOH . N 8 HOH BBB 107 407 183 HOH HOH . N 8 HOH BBB 108 408 200 HOH HOH . N 8 HOH BBB 109 409 226 HOH HOH . N 8 HOH BBB 110 410 177 HOH HOH . N 8 HOH BBB 111 411 190 HOH HOH . N 8 HOH BBB 112 412 63 HOH HOH . N 8 HOH BBB 113 413 172 HOH HOH . N 8 HOH BBB 114 414 94 HOH HOH . N 8 HOH BBB 115 415 79 HOH HOH . N 8 HOH BBB 116 416 205 HOH HOH . N 8 HOH BBB 117 417 208 HOH HOH . N 8 HOH BBB 118 418 207 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . J 7 17.558 31.164 -3.562 1 44.57 0 C1 PEG 204 BBB 1 HETATM 2 O O1 PEG . . . J 7 18.127 30.573 -2.389 1 48.75 0 O1 PEG 204 BBB 1 HETATM 3 C C2 PEG . . . J 7 17.338 30.189 -4.68 1 38.99 0 C2 PEG 204 BBB 1 HETATM 4 O O2 PEG . . . J 7 15.999 30.269 -5.171 1 41.43 0 O2 PEG 204 BBB 1 HETATM 5 C C3 PEG . . . J 7 15.605 29.059 -5.817 1 31.75 0 C3 PEG 204 BBB 1 HETATM 6 C C4 PEG . . . J 7 14.353 29.244 -6.648 1 27.16 0 C4 PEG 204 BBB 1 HETATM 7 O O4 PEG . . . J 7 13.656 27.969 -6.921 1 17.63 0 O4 PEG 204 BBB 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #