data_8VTQ
#
_model_server_result.job_id            JdUh7hUfq_ZLjprw114RCw 
_model_server_result.datetime_utc      '2024-11-15 04:01:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8vtq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":403}' 
#
_entry.id    8VTQ 
#
_exptl.entry_id    8VTQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              331.414 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (6M)-6-(1H-indol-3-yl)-1-[(piperidin-4-yl)methyl]-1H-benzotriazole 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8VTQ 
_cell.length_a            143.818 
_cell.length_b            154.732 
_cell.length_c            88.407 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8VTQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 J N N 
? 4 M N N 
? 4 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 312 A HIS 328 1_555 E FE HEM . A HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
metalc ? metalc2 B NE2 HIS 312 B HIS 328 1_555 H FE HEM . B HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc3 C NE2 HIS 312 C HIS 328 1_555 K FE HEM . C HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc4 D NE2 HIS 312 D HIS 328 1_555 N FE HEM . D HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
#
_chem_comp.formula           'C20 H21 N5' 
_chem_comp.formula_weight    331.414 
_chem_comp.id                A1ADX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (6M)-6-(1H-indol-3-yl)-1-[(piperidin-4-yl)methyl]-1H-benzotriazole 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C20 A1ADX doub 1 n y 
C1 C2 A1ADX sing 2 n y 
C20 C19 A1ADX sing 3 n y 
C2 C3 A1ADX doub 4 n y 
C19 N5 A1ADX sing 5 n y 
C19 C4 A1ADX doub 6 n y 
N5 C18 A1ADX sing 7 n y 
C3 C4 A1ADX sing 8 n y 
C4 C5 A1ADX sing 9 n y 
C18 C5 A1ADX doub 10 n y 
C5 C6 A1ADX sing 11 n n 
C14 C15 A1ADX sing 12 n n 
C14 N4 A1ADX sing 13 n n 
C15 C11 A1ADX sing 14 n n 
C6 C17 A1ADX doub 15 n y 
C6 C7 A1ADX sing 16 n y 
C17 C16 A1ADX sing 17 n y 
N4 C13 A1ADX sing 18 n n 
C12 C11 A1ADX sing 19 n n 
C12 C13 A1ADX sing 20 n n 
C10 C11 A1ADX sing 21 n n 
C10 N3 A1ADX sing 22 n n 
C7 C8 A1ADX doub 23 n y 
C16 N3 A1ADX sing 24 n y 
C16 C9 A1ADX doub 25 n y 
N3 N2 A1ADX sing 26 n y 
C8 C9 A1ADX sing 27 n y 
C9 N1 A1ADX sing 28 n y 
N2 N1 A1ADX doub 29 n y 
C1 H1 A1ADX sing 30 n n 
C2 H2 A1ADX sing 31 n n 
C3 H3 A1ADX sing 32 n n 
C7 H4 A1ADX sing 33 n n 
C8 H5 A1ADX sing 34 n n 
C10 H7 A1ADX sing 35 n n 
C10 H6 A1ADX sing 36 n n 
C11 H8 A1ADX sing 37 n n 
C12 H9 A1ADX sing 38 n n 
C12 H10 A1ADX sing 39 n n 
C13 H12 A1ADX sing 40 n n 
C13 H11 A1ADX sing 41 n n 
N4 H22 A1ADX sing 42 n n 
C14 H15 A1ADX sing 43 n n 
C14 H14 A1ADX sing 44 n n 
C15 H16 A1ADX sing 45 n n 
C15 H17 A1ADX sing 46 n n 
C17 H18 A1ADX sing 47 n n 
C18 H19 A1ADX sing 48 n n 
N5 H20 A1ADX sing 49 n n 
C20 H21 A1ADX sing 50 n n 
#
_atom_sites.entry_id                     8VTQ 
_atom_sites.fract_transf_matrix[1][1]    0.006953 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006463 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011311 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HEM A 1 401 401 HEM HEM . 
F 3 ZIQ A 1 402 402 ZIQ ZIQ . 
G 4 A1ADX A 1 403 403 A1ADX 14d . 
H 2 HEM B 1 401 401 HEM HEM . 
I 3 ZIQ B 1 402 402 ZIQ ZIQ . 
J 4 A1ADX B 1 403 403 A1ADX 14d . 
K 2 HEM C 1 401 401 HEM HEM . 
L 3 ZIQ C 1 402 402 ZIQ ZIQ . 
M 4 A1ADX C 1 403 403 A1ADX 14d . 
N 2 HEM D 1 401 401 HEM HEM . 
O 3 ZIQ D 1 402 402 ZIQ ZIQ . 
P 4 A1ADX D 1 403 403 A1ADX 14d . 
Q 5 HOH A 1 501 138 HOH HOH . 
Q 5 HOH A 2 502 21 HOH HOH . 
Q 5 HOH A 3 503 96 HOH HOH . 
Q 5 HOH A 4 504 145 HOH HOH . 
Q 5 HOH A 5 505 52 HOH HOH . 
Q 5 HOH A 6 506 58 HOH HOH . 
Q 5 HOH A 7 507 40 HOH HOH . 
Q 5 HOH A 8 508 108 HOH HOH . 
Q 5 HOH A 9 509 101 HOH HOH . 
Q 5 HOH A 10 510 83 HOH HOH . 
Q 5 HOH A 11 511 111 HOH HOH . 
Q 5 HOH A 12 512 141 HOH HOH . 
Q 5 HOH A 13 513 75 HOH HOH . 
Q 5 HOH A 14 514 59 HOH HOH . 
Q 5 HOH A 15 515 42 HOH HOH . 
Q 5 HOH A 16 516 1 HOH HOH . 
Q 5 HOH A 17 517 76 HOH HOH . 
Q 5 HOH A 18 518 8 HOH HOH . 
Q 5 HOH A 19 519 3 HOH HOH . 
Q 5 HOH A 20 520 16 HOH HOH . 
Q 5 HOH A 21 521 113 HOH HOH . 
Q 5 HOH A 22 522 38 HOH HOH . 
Q 5 HOH A 23 523 124 HOH HOH . 
Q 5 HOH A 24 524 48 HOH HOH . 
Q 5 HOH A 25 525 125 HOH HOH . 
Q 5 HOH A 26 526 93 HOH HOH . 
Q 5 HOH A 27 527 105 HOH HOH . 
Q 5 HOH A 28 528 36 HOH HOH . 
Q 5 HOH A 29 529 131 HOH HOH . 
Q 5 HOH A 30 530 84 HOH HOH . 
Q 5 HOH A 31 531 14 HOH HOH . 
Q 5 HOH A 32 532 47 HOH HOH . 
Q 5 HOH A 33 533 106 HOH HOH . 
Q 5 HOH A 34 534 71 HOH HOH . 
Q 5 HOH A 35 535 69 HOH HOH . 
Q 5 HOH A 36 536 63 HOH HOH . 
Q 5 HOH A 37 537 56 HOH HOH . 
Q 5 HOH A 38 538 68 HOH HOH . 
Q 5 HOH A 39 539 19 HOH HOH . 
Q 5 HOH A 40 540 88 HOH HOH . 
Q 5 HOH A 41 541 90 HOH HOH . 
Q 5 HOH A 42 542 57 HOH HOH . 
Q 5 HOH A 43 543 31 HOH HOH . 
Q 5 HOH A 44 544 51 HOH HOH . 
Q 5 HOH A 45 545 95 HOH HOH . 
Q 5 HOH A 46 546 45 HOH HOH . 
Q 5 HOH A 47 547 115 HOH HOH . 
Q 5 HOH A 48 548 2 HOH HOH . 
Q 5 HOH A 49 549 117 HOH HOH . 
R 5 HOH B 1 501 142 HOH HOH . 
R 5 HOH B 2 502 32 HOH HOH . 
R 5 HOH B 3 503 35 HOH HOH . 
R 5 HOH B 4 504 86 HOH HOH . 
R 5 HOH B 5 505 143 HOH HOH . 
R 5 HOH B 6 506 73 HOH HOH . 
R 5 HOH B 7 507 18 HOH HOH . 
R 5 HOH B 8 508 49 HOH HOH . 
R 5 HOH B 9 509 100 HOH HOH . 
R 5 HOH B 10 510 127 HOH HOH . 
R 5 HOH B 11 511 26 HOH HOH . 
R 5 HOH B 12 512 50 HOH HOH . 
R 5 HOH B 13 513 112 HOH HOH . 
R 5 HOH B 14 514 22 HOH HOH . 
R 5 HOH B 15 515 4 HOH HOH . 
R 5 HOH B 16 516 43 HOH HOH . 
R 5 HOH B 17 517 110 HOH HOH . 
R 5 HOH B 18 518 12 HOH HOH . 
R 5 HOH B 19 519 67 HOH HOH . 
R 5 HOH B 20 520 28 HOH HOH . 
R 5 HOH B 21 521 77 HOH HOH . 
R 5 HOH B 22 522 81 HOH HOH . 
R 5 HOH B 23 523 102 HOH HOH . 
R 5 HOH B 24 524 37 HOH HOH . 
R 5 HOH B 25 525 126 HOH HOH . 
R 5 HOH B 26 526 133 HOH HOH . 
R 5 HOH B 27 527 6 HOH HOH . 
R 5 HOH B 28 528 109 HOH HOH . 
R 5 HOH B 29 529 70 HOH HOH . 
R 5 HOH B 30 530 30 HOH HOH . 
R 5 HOH B 31 531 78 HOH HOH . 
R 5 HOH B 32 532 114 HOH HOH . 
R 5 HOH B 33 533 119 HOH HOH . 
R 5 HOH B 34 534 46 HOH HOH . 
R 5 HOH B 35 535 80 HOH HOH . 
R 5 HOH B 36 536 5 HOH HOH . 
S 5 HOH C 1 501 53 HOH HOH . 
S 5 HOH C 2 502 136 HOH HOH . 
S 5 HOH C 3 503 140 HOH HOH . 
S 5 HOH C 4 504 41 HOH HOH . 
S 5 HOH C 5 505 13 HOH HOH . 
S 5 HOH C 6 506 144 HOH HOH . 
S 5 HOH C 7 507 92 HOH HOH . 
S 5 HOH C 8 508 54 HOH HOH . 
S 5 HOH C 9 509 20 HOH HOH . 
S 5 HOH C 10 510 128 HOH HOH . 
S 5 HOH C 11 511 135 HOH HOH . 
S 5 HOH C 12 512 10 HOH HOH . 
S 5 HOH C 13 513 39 HOH HOH . 
S 5 HOH C 14 514 64 HOH HOH . 
S 5 HOH C 15 515 33 HOH HOH . 
S 5 HOH C 16 516 60 HOH HOH . 
S 5 HOH C 17 517 79 HOH HOH . 
S 5 HOH C 18 518 61 HOH HOH . 
S 5 HOH C 19 519 85 HOH HOH . 
S 5 HOH C 20 520 146 HOH HOH . 
T 5 HOH D 1 501 87 HOH HOH . 
T 5 HOH D 2 502 62 HOH HOH . 
T 5 HOH D 3 503 72 HOH HOH . 
T 5 HOH D 4 504 74 HOH HOH . 
T 5 HOH D 5 505 11 HOH HOH . 
T 5 HOH D 6 506 134 HOH HOH . 
T 5 HOH D 7 507 97 HOH HOH . 
T 5 HOH D 8 508 82 HOH HOH . 
T 5 HOH D 9 509 94 HOH HOH . 
T 5 HOH D 10 510 24 HOH HOH . 
T 5 HOH D 11 511 107 HOH HOH . 
T 5 HOH D 12 512 44 HOH HOH . 
T 5 HOH D 13 513 15 HOH HOH . 
T 5 HOH D 14 514 17 HOH HOH . 
T 5 HOH D 15 515 120 HOH HOH . 
T 5 HOH D 16 516 66 HOH HOH . 
T 5 HOH D 17 517 121 HOH HOH . 
T 5 HOH D 18 518 103 HOH HOH . 
T 5 HOH D 19 519 129 HOH HOH . 
T 5 HOH D 20 520 25 HOH HOH . 
T 5 HOH D 21 521 89 HOH HOH . 
T 5 HOH D 22 522 29 HOH HOH . 
T 5 HOH D 23 523 116 HOH HOH . 
T 5 HOH D 24 524 7 HOH HOH . 
T 5 HOH D 25 525 9 HOH HOH . 
T 5 HOH D 26 526 104 HOH HOH . 
T 5 HOH D 27 527 139 HOH HOH . 
T 5 HOH D 28 528 130 HOH HOH . 
T 5 HOH D 29 529 132 HOH HOH . 
T 5 HOH D 30 530 91 HOH HOH . 
T 5 HOH D 31 531 137 HOH HOH . 
T 5 HOH D 32 532 55 HOH HOH . 
T 5 HOH D 33 533 99 HOH HOH . 
T 5 HOH D 34 534 65 HOH HOH . 
T 5 HOH D 35 535 23 HOH HOH . 
T 5 HOH D 36 536 27 HOH HOH . 
T 5 HOH D 37 537 122 HOH HOH . 
T 5 HOH D 38 538 118 HOH HOH . 
T 5 HOH D 39 539 98 HOH HOH . 
T 5 HOH D 40 540 34 HOH HOH . 
T 5 HOH D 41 541 123 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 A1ADX . . . G 4 38.116 -64.267 -35.297 1 64.65 ? C1 A1ADX 403 A 1 
HETATM 2 C C2 A1ADX . . . G 4 38.748 -65.025 -34.328 1 68.73 ? C2 A1ADX 403 A 1 
HETATM 3 C C3 A1ADX . . . G 4 39.098 -64.495 -33.1 1 70.83 ? C3 A1ADX 403 A 1 
HETATM 4 C C4 A1ADX . . . G 4 38.864 -63.145 -32.861 1 67.9 ? C4 A1ADX 403 A 1 
HETATM 5 C C5 A1ADX . . . G 4 39.098 -62.255 -31.752 1 70.07 ? C5 A1ADX 403 A 1 
HETATM 6 C C6 A1ADX . . . G 4 39.662 -62.58 -30.439 1 79.26 ? C6 A1ADX 403 A 1 
HETATM 7 C C7 A1ADX . . . G 4 39.101 -62.003 -29.282 1 91.86 ? C7 A1ADX 403 A 1 
HETATM 8 C C8 A1ADX . . . G 4 39.556 -62.288 -28.015 1 87.84 ? C8 A1ADX 403 A 1 
HETATM 9 C C9 A1ADX . . . G 4 40.603 -63.19 -27.897 1 90.8 ? C9 A1ADX 403 A 1 
HETATM 10 N N1 A1ADX . . . G 4 41.264 -63.668 -26.799 1 96 ? N1 A1ADX 403 A 1 
HETATM 11 N N2 A1ADX . . . G 4 42.184 -64.486 -27.227 1 116.61 ? N2 A1ADX 403 A 1 
HETATM 12 N N3 A1ADX . . . G 4 42.131 -64.582 -28.575 1 118.28 ? N3 A1ADX 403 A 1 
HETATM 13 C C10 A1ADX . . . G 4 43.082 -65.404 -29.313 1 130.58 ? C10 A1ADX 403 A 1 
HETATM 14 C C11 A1ADX . . . G 4 44.489 -64.79 -29.327 1 141.87 ? C11 A1ADX 403 A 1 
HETATM 15 C C12 A1ADX . . . G 4 45.325 -65.357 -30.466 1 129.27 ? C12 A1ADX 403 A 1 
HETATM 16 C C13 A1ADX . . . G 4 46.171 -64.3 -31.12 1 137.17 ? C13 A1ADX 403 A 1 
HETATM 17 N N4 A1ADX . . . G 4 46.8 -63.442 -30.103 1 140.85 ? N4 A1ADX 403 A 1 
HETATM 18 C C14 A1ADX . . . G 4 45.822 -62.646 -29.347 1 135.94 ? C14 A1ADX 403 A 1 
HETATM 19 C C15 A1ADX . . . G 4 44.447 -63.261 -29.427 1 143.89 ? C15 A1ADX 403 A 1 
HETATM 20 C C16 A1ADX . . . G 4 41.149 -63.758 -29.039 1 102.43 ? C16 A1ADX 403 A 1 
HETATM 21 C C17 A1ADX . . . G 4 40.676 -63.449 -30.31 1 89.36 ? C17 A1ADX 403 A 1 
HETATM 22 C C18 A1ADX . . . G 4 38.598 -61.022 -32.128 1 74 ? C18 A1ADX 403 A 1 
HETATM 23 N N5 A1ADX . . . G 4 38.109 -61.095 -33.397 1 70.59 ? N5 A1ADX 403 A 1 
HETATM 24 C C19 A1ADX . . . G 4 38.236 -62.389 -33.87 1 65.44 ? C19 A1ADX 403 A 1 
HETATM 25 C C20 A1ADX . . . G 4 37.867 -62.935 -35.097 1 64.57 ? C20 A1ADX 403 A 1 
#
_model_server_stats.io_time_ms              38 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           25 
#