data_8VUC
#
_model_server_result.job_id            y7a_KqimMANYo0OSm2Wayg 
_model_server_result.datetime_utc      '2024-12-14 23:37:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8vuc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":302}' 
#
_entry.id    8VUC 
#
_exptl.entry_id    8VUC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8VUC 
_cell.length_a            67.389 
_cell.length_b            67.389 
_cell.length_c            168.232 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8VUC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        145 
_symmetry.space_group_name_Hall    'P 32' 
_symmetry.space_group_name_H-M     'P 32' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,K,L,N,O 1 1 
C,D,M,P,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 23 1_555 A SG CYS 96 A CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf2 A SG CYS 143 A CYS 154 1_555 A SG CYS 199 A CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf3 A SG CYS 219 A CYS 230 1_555 B SG CYS 212 G CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf4 B SG CYS 23 G CYS 23 1_555 B SG CYS 88 G CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf5 B SG CYS 134 G CYS 154 1_555 B SG CYS 194 G CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
disulf ? disulf6 C SG CYS 22 B CYS 23 1_555 C SG CYS 96 B CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf7 C SG CYS 143 B CYS 154 1_555 C SG CYS 199 B CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf8 C SG CYS 219 B CYS 230 1_555 D SG CYS 212 C CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf9 D SG CYS 23 C CYS 23 1_555 D SG CYS 88 C CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
disulf ? disulf10 D SG CYS 134 C CYS 154 1_555 D SG CYS 194 C CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8VUC 
_atom_sites.fract_transf_matrix[1][1]    0.014839 
_atom_sites.fract_transf_matrix[1][2]    0.008567 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017135 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005944 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 EDO A 1 301 301 EDO EDO . 
F 3 EDO A 1 302 302 EDO EDO . 
G 4 SO4 A 1 303 2 SO4 SO4 . 
H 4 SO4 A 1 304 3 SO4 SO4 . 
I 5 CL A 1 305 4 CL CL . 
J 4 SO4 G 1 301 1 SO4 SO4 . 
K 5 CL G 1 302 1 CL CL . 
L 5 CL G 1 303 2 CL CL . 
M 5 CL B 1 301 3 CL CL . 
N 6 HOH A 1 401 38 HOH HOH . 
N 6 HOH A 2 402 30 HOH HOH . 
N 6 HOH A 3 403 23 HOH HOH . 
N 6 HOH A 4 404 10 HOH HOH . 
N 6 HOH A 5 405 54 HOH HOH . 
N 6 HOH A 6 406 22 HOH HOH . 
N 6 HOH A 7 407 29 HOH HOH . 
N 6 HOH A 8 408 9 HOH HOH . 
N 6 HOH A 9 409 37 HOH HOH . 
O 6 HOH G 1 401 13 HOH HOH . 
O 6 HOH G 2 402 18 HOH HOH . 
O 6 HOH G 3 403 16 HOH HOH . 
O 6 HOH G 4 404 8 HOH HOH . 
O 6 HOH G 5 405 33 HOH HOH . 
O 6 HOH G 6 406 46 HOH HOH . 
O 6 HOH G 7 407 2 HOH HOH . 
O 6 HOH G 8 408 31 HOH HOH . 
O 6 HOH G 9 409 45 HOH HOH . 
O 6 HOH G 10 410 34 HOH HOH . 
P 6 HOH B 1 401 24 HOH HOH . 
P 6 HOH B 2 402 17 HOH HOH . 
P 6 HOH B 3 403 28 HOH HOH . 
P 6 HOH B 4 404 44 HOH HOH . 
P 6 HOH B 5 405 7 HOH HOH . 
P 6 HOH B 6 406 41 HOH HOH . 
P 6 HOH B 7 407 27 HOH HOH . 
P 6 HOH B 8 408 21 HOH HOH . 
P 6 HOH B 9 409 19 HOH HOH . 
P 6 HOH B 10 410 25 HOH HOH . 
P 6 HOH B 11 411 55 HOH HOH . 
Q 6 HOH C 1 301 52 HOH HOH . 
Q 6 HOH C 2 302 20 HOH HOH . 
Q 6 HOH C 3 303 5 HOH HOH . 
Q 6 HOH C 4 304 15 HOH HOH . 
Q 6 HOH C 5 305 4 HOH HOH . 
Q 6 HOH C 6 306 32 HOH HOH . 
Q 6 HOH C 7 307 47 HOH HOH . 
Q 6 HOH C 8 308 3 HOH HOH . 
Q 6 HOH C 9 309 39 HOH HOH . 
Q 6 HOH C 10 310 11 HOH HOH . 
Q 6 HOH C 11 311 6 HOH HOH . 
Q 6 HOH C 12 312 50 HOH HOH . 
Q 6 HOH C 13 313 53 HOH HOH . 
Q 6 HOH C 14 314 49 HOH HOH . 
Q 6 HOH C 15 315 48 HOH HOH . 
Q 6 HOH C 16 316 14 HOH HOH . 
Q 6 HOH C 17 317 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 3 -46.61 16.537 -0.206 1 51.85 ? C1 EDO 302 A 1 
HETATM 2 O O1 EDO . . . F 3 -47.033 17.567 0.682 1 51.49 ? O1 EDO 302 A 1 
HETATM 3 C C2 EDO . . . F 3 -47.716 16.223 -1.208 1 55.56 ? C2 EDO 302 A 1 
HETATM 4 O O2 EDO . . . F 3 -47.097 15.516 -2.28 1 52.46 ? O2 EDO 302 A 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           4 
#