data_8VUG # _model_server_result.job_id IzjCO9nQOvSMJycRl1gFKA _model_server_result.datetime_utc '2024-11-15 03:11:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vug # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":402}' # _entry.id 8VUG # _exptl.entry_id 8VUG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 218.252 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description alpha-methyl-L-tryptophan _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8VUG _cell.length_a 143.805 _cell.length_b 154.925 _cell.length_c 88.32 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VUG _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N ? 3 L N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 312 A HIS 328 1_555 E FE HEM . A HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc2 B NE2 HIS 312 B HIS 328 1_555 H FE HEM . B HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc3 C NE2 HIS 312 C HIS 328 1_555 K FE HEM . C HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc4 D NE2 HIS 312 D HIS 328 1_555 N FE HEM . D HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? # _chem_comp.formula 'C12 H14 N2 O2' _chem_comp.formula_weight 218.252 _chem_comp.id ZIQ _chem_comp.mon_nstd_flag n _chem_comp.name alpha-methyl-L-tryptophan _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 CA ZIQ sing 508 n n O C ZIQ doub 509 n n CA C ZIQ sing 510 n n CA N ZIQ sing 511 n n CA CB ZIQ sing 512 n n C OXT ZIQ sing 513 n n CB CG ZIQ sing 514 n n CG CD1 ZIQ doub 515 n y CG CD2 ZIQ sing 516 n y CD1 NE1 ZIQ sing 517 n y CE3 CD2 ZIQ doub 518 n y CE3 CZ3 ZIQ sing 519 n y CD2 CE2 ZIQ sing 520 n y NE1 CE2 ZIQ sing 521 n y CZ3 CH2 ZIQ doub 522 n y CE2 CZ2 ZIQ doub 523 n y CH2 CZ2 ZIQ sing 524 n y N H ZIQ sing 525 n n N H2 ZIQ sing 526 n n CB H4 ZIQ sing 527 n n CB H5 ZIQ sing 528 n n CE3 H6 ZIQ sing 529 n n CZ3 H7 ZIQ sing 530 n n CH2 H8 ZIQ sing 531 n n CZ2 H9 ZIQ sing 532 n n NE1 H10 ZIQ sing 533 n n CD1 H11 ZIQ sing 534 n n C1 H12 ZIQ sing 535 n n C1 H13 ZIQ sing 536 n n C1 H14 ZIQ sing 537 n n OXT HXT ZIQ sing 538 n n # _atom_sites.entry_id 8VUG _atom_sites.fract_transf_matrix[1][1] 0.006954 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006455 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011322 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HEM A 1 401 401 HEM HEM . F 3 ZIQ A 1 402 402 ZIQ ZIQ . G 4 A1AD1 A 1 403 403 A1AD1 19d . H 2 HEM B 1 401 401 HEM HEM . I 3 ZIQ B 1 402 402 ZIQ ZIQ . J 4 A1AD1 B 1 403 403 A1AD1 19d . K 2 HEM C 1 401 401 HEM HEM . L 3 ZIQ C 1 402 402 ZIQ ZIQ . M 4 A1AD1 C 1 403 403 A1AD1 19d . N 2 HEM D 1 401 401 HEM HEM . O 3 ZIQ D 1 402 402 ZIQ ZIQ . P 4 A1AD1 D 1 403 403 A1AD1 19d . Q 5 HOH A 1 501 109 HOH HOH . Q 5 HOH A 2 502 87 HOH HOH . Q 5 HOH A 3 503 104 HOH HOH . Q 5 HOH A 4 504 117 HOH HOH . Q 5 HOH A 5 505 26 HOH HOH . Q 5 HOH A 6 506 68 HOH HOH . Q 5 HOH A 7 507 73 HOH HOH . Q 5 HOH A 8 508 83 HOH HOH . Q 5 HOH A 9 509 107 HOH HOH . Q 5 HOH A 10 510 45 HOH HOH . Q 5 HOH A 11 511 54 HOH HOH . Q 5 HOH A 12 512 102 HOH HOH . Q 5 HOH A 13 513 123 HOH HOH . Q 5 HOH A 14 514 112 HOH HOH . Q 5 HOH A 15 515 57 HOH HOH . Q 5 HOH A 16 516 51 HOH HOH . Q 5 HOH A 17 517 23 HOH HOH . Q 5 HOH A 18 518 32 HOH HOH . Q 5 HOH A 19 519 48 HOH HOH . Q 5 HOH A 20 520 110 HOH HOH . Q 5 HOH A 21 521 1 HOH HOH . Q 5 HOH A 22 522 120 HOH HOH . Q 5 HOH A 23 523 11 HOH HOH . Q 5 HOH A 24 524 84 HOH HOH . Q 5 HOH A 25 525 3 HOH HOH . Q 5 HOH A 26 526 94 HOH HOH . Q 5 HOH A 27 527 46 HOH HOH . Q 5 HOH A 28 528 10 HOH HOH . Q 5 HOH A 29 529 24 HOH HOH . Q 5 HOH A 30 530 19 HOH HOH . Q 5 HOH A 31 531 27 HOH HOH . Q 5 HOH A 32 532 22 HOH HOH . Q 5 HOH A 33 533 41 HOH HOH . Q 5 HOH A 34 534 49 HOH HOH . Q 5 HOH A 35 535 89 HOH HOH . Q 5 HOH A 36 536 65 HOH HOH . Q 5 HOH A 37 537 108 HOH HOH . Q 5 HOH A 38 538 74 HOH HOH . Q 5 HOH A 39 539 85 HOH HOH . Q 5 HOH A 40 540 55 HOH HOH . Q 5 HOH A 41 541 34 HOH HOH . Q 5 HOH A 42 542 90 HOH HOH . Q 5 HOH A 43 543 2 HOH HOH . Q 5 HOH A 44 544 119 HOH HOH . R 5 HOH B 1 501 18 HOH HOH . R 5 HOH B 2 502 21 HOH HOH . R 5 HOH B 3 503 75 HOH HOH . R 5 HOH B 4 504 31 HOH HOH . R 5 HOH B 5 505 114 HOH HOH . R 5 HOH B 6 506 69 HOH HOH . R 5 HOH B 7 507 8 HOH HOH . R 5 HOH B 8 508 122 HOH HOH . R 5 HOH B 9 509 9 HOH HOH . R 5 HOH B 10 510 76 HOH HOH . R 5 HOH B 11 511 96 HOH HOH . R 5 HOH B 12 512 81 HOH HOH . R 5 HOH B 13 513 82 HOH HOH . R 5 HOH B 14 514 30 HOH HOH . R 5 HOH B 15 515 64 HOH HOH . R 5 HOH B 16 516 116 HOH HOH . R 5 HOH B 17 517 86 HOH HOH . R 5 HOH B 18 518 70 HOH HOH . R 5 HOH B 19 519 100 HOH HOH . R 5 HOH B 20 520 101 HOH HOH . R 5 HOH B 21 521 56 HOH HOH . R 5 HOH B 22 522 77 HOH HOH . R 5 HOH B 23 523 93 HOH HOH . R 5 HOH B 24 524 95 HOH HOH . R 5 HOH B 25 525 52 HOH HOH . R 5 HOH B 26 526 16 HOH HOH . R 5 HOH B 27 527 13 HOH HOH . R 5 HOH B 28 528 58 HOH HOH . R 5 HOH B 29 529 50 HOH HOH . R 5 HOH B 30 530 79 HOH HOH . R 5 HOH B 31 531 15 HOH HOH . R 5 HOH B 32 532 72 HOH HOH . R 5 HOH B 33 533 91 HOH HOH . S 5 HOH C 1 501 111 HOH HOH . S 5 HOH C 2 502 7 HOH HOH . S 5 HOH C 3 503 12 HOH HOH . S 5 HOH C 4 504 25 HOH HOH . S 5 HOH C 5 505 40 HOH HOH . S 5 HOH C 6 506 17 HOH HOH . S 5 HOH C 7 507 37 HOH HOH . S 5 HOH C 8 508 103 HOH HOH . S 5 HOH C 9 509 59 HOH HOH . S 5 HOH C 10 510 80 HOH HOH . S 5 HOH C 11 511 35 HOH HOH . S 5 HOH C 12 512 78 HOH HOH . S 5 HOH C 13 513 71 HOH HOH . S 5 HOH C 14 514 99 HOH HOH . S 5 HOH C 15 515 67 HOH HOH . S 5 HOH C 16 516 42 HOH HOH . S 5 HOH C 17 517 62 HOH HOH . S 5 HOH C 18 518 66 HOH HOH . S 5 HOH C 19 519 4 HOH HOH . S 5 HOH C 20 520 125 HOH HOH . T 5 HOH D 1 501 115 HOH HOH . T 5 HOH D 2 502 118 HOH HOH . T 5 HOH D 3 503 5 HOH HOH . T 5 HOH D 4 504 43 HOH HOH . T 5 HOH D 5 505 113 HOH HOH . T 5 HOH D 6 506 106 HOH HOH . T 5 HOH D 7 507 14 HOH HOH . T 5 HOH D 8 508 33 HOH HOH . T 5 HOH D 9 509 28 HOH HOH . T 5 HOH D 10 510 47 HOH HOH . T 5 HOH D 11 511 105 HOH HOH . T 5 HOH D 12 512 20 HOH HOH . T 5 HOH D 13 513 36 HOH HOH . T 5 HOH D 14 514 97 HOH HOH . T 5 HOH D 15 515 98 HOH HOH . T 5 HOH D 16 516 60 HOH HOH . T 5 HOH D 17 517 44 HOH HOH . T 5 HOH D 18 518 121 HOH HOH . T 5 HOH D 19 519 63 HOH HOH . T 5 HOH D 20 520 53 HOH HOH . T 5 HOH D 21 521 61 HOH HOH . T 5 HOH D 22 522 29 HOH HOH . T 5 HOH D 23 523 39 HOH HOH . T 5 HOH D 24 524 38 HOH HOH . T 5 HOH D 25 525 6 HOH HOH . T 5 HOH D 26 526 88 HOH HOH . T 5 HOH D 27 527 92 HOH HOH . T 5 HOH D 28 528 124 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ZIQ . . . O 3 -18.501 56.603 17.879 1 64.73 ? N ZIQ 402 D 1 HETATM 2 C CA ZIQ . . . O 3 -17.575 56.929 19.005 1 64.06 ? CA ZIQ 402 D 1 HETATM 3 C CB ZIQ . . . O 3 -17.378 55.719 19.957 1 64.78 ? CB ZIQ 402 D 1 HETATM 4 C CG ZIQ . . . O 3 -16.698 54.52 19.361 1 62.06 ? CG ZIQ 402 D 1 HETATM 5 C CD2 ZIQ . . . O 3 -17.316 53.244 19.079 1 60.49 ? CD2 ZIQ 402 D 1 HETATM 6 C CE3 ZIQ . . . O 3 -18.614 52.74 19.216 1 53.56 ? CE3 ZIQ 402 D 1 HETATM 7 C CZ3 ZIQ . . . O 3 -18.855 51.434 18.874 1 59.24 ? CZ3 ZIQ 402 D 1 HETATM 8 C CH2 ZIQ . . . O 3 -17.842 50.621 18.347 1 62.21 ? CH2 ZIQ 402 D 1 HETATM 9 C CZ2 ZIQ . . . O 3 -16.552 51.084 18.197 1 59.86 ? CZ2 ZIQ 402 D 1 HETATM 10 C CE2 ZIQ . . . O 3 -16.301 52.399 18.567 1 57 ? CE2 ZIQ 402 D 1 HETATM 11 N NE1 ZIQ . . . O 3 -15.143 53.125 18.517 1 60.39 ? NE1 ZIQ 402 D 1 HETATM 12 C CD1 ZIQ . . . O 3 -15.389 54.385 19.002 1 64.17 ? CD1 ZIQ 402 D 1 HETATM 13 C C1 ZIQ . . . O 3 -18.18 58.075 19.788 1 63.06 ? C1 ZIQ 402 D 1 HETATM 14 C C ZIQ . . . O 3 -16.217 57.374 18.411 1 68.26 ? C ZIQ 402 D 1 HETATM 15 O O ZIQ . . . O 3 -16.029 57.206 17.179 1 69.09 ? O ZIQ 402 D 1 HETATM 16 O OXT ZIQ . . . O 3 -15.384 57.823 19.224 1 74.56 ? OXT ZIQ 402 D 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #