data_8VW2
#
_model_server_result.job_id            geaUJX8zGuCflICQ7M4J-g 
_model_server_result.datetime_utc      '2024-12-26 14:29:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8vw2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    8VW2 
#
_exptl.entry_id    8VW2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8VW2 
_cell.length_a            58.456 
_cell.length_b            69.944 
_cell.length_c            100.534 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8VW2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 198 A ALA 198 1_555 A N KCX 199 A KCX 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale2 A C KCX 199 A KCX 199 1_555 A N LEU 200 A LEU 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
metalc ? metalc1 A OG SER 117 A SER 117 1_555 F MG MG . A MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc2 A OE2 GLU 158 A GLU 158 1_555 F MG MG . A MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc3 A OG SER 416 A SER 416 1_555 D CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.149 ? 
metalc ? metalc4 D CA CA . A CA 503 1_555 L O HOH . A HOH 730 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? 
metalc ? metalc5 E O1G ATP . A ATP 504 1_555 F MG MG . A MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? 
metalc ? metalc6 E O2B ATP . A ATP 504 1_555 F MG MG . A MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
metalc ? metalc7 E O3G ATP . A ATP 504 1_555 H MG MG . A MG 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? 
metalc ? metalc8 F MG MG . A MG 505 1_555 L O HOH . A HOH 683 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? 
metalc ? metalc9 F MG MG . A MG 505 1_555 L O HOH . A HOH 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? 
metalc ? metalc10 G MG MG . A MG 506 1_555 L O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? 
metalc ? metalc11 G MG MG . A MG 506 1_555 L O HOH . A HOH 633 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? 
metalc ? metalc12 G MG MG . A MG 506 1_555 L O HOH . A HOH 736 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? 
metalc ? metalc13 G MG MG . A MG 506 1_555 L O HOH . A HOH 743 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? 
metalc ? metalc14 H MG MG . A MG 507 1_555 L O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc15 H MG MG . A MG 507 1_555 L O HOH . A HOH 688 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
metalc ? metalc16 H MG MG . A MG 507 1_555 L O HOH . A HOH 742 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? 
metalc ? metalc17 I MG MG . A MG 508 1_555 L O HOH . A HOH 608 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
metalc ? metalc18 I MG MG . A MG 508 1_555 L O HOH . A HOH 637 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? 
metalc ? metalc19 I MG MG . A MG 508 1_555 L O HOH . A HOH 690 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc20 I MG MG . A MG 508 1_555 L O HOH . A HOH 734 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc21 I MG MG . A MG 508 1_555 L O HOH . A HOH 739 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8VW2 
_atom_sites.fract_transf_matrix[1][1]    0.017107 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014297 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009947 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 501 2 CA CA . 
C 2 CA A 1 502 3 CA CA . 
D 2 CA A 1 503 4 CA CA . 
E 3 ATP A 1 504 501 ATP ATP . 
F 4 MG A 1 505 2 MG MG . 
G 4 MG A 1 506 3 MG MG . 
H 4 MG A 1 507 4 MG MG . 
I 4 MG A 1 508 5 MG MG . 
J 5 MPD A 1 509 502 MPD MPD . 
K 6 DMS A 1 510 501 DMS DMS . 
L 7 HOH A 1 601 46 HOH HOH . 
L 7 HOH A 2 602 59 HOH HOH . 
L 7 HOH A 3 603 61 HOH HOH . 
L 7 HOH A 4 604 130 HOH HOH . 
L 7 HOH A 5 605 70 HOH HOH . 
L 7 HOH A 6 606 142 HOH HOH . 
L 7 HOH A 7 607 126 HOH HOH . 
L 7 HOH A 8 608 21 HOH HOH . 
L 7 HOH A 9 609 11 HOH HOH . 
L 7 HOH A 10 610 118 HOH HOH . 
L 7 HOH A 11 611 131 HOH HOH . 
L 7 HOH A 12 612 18 HOH HOH . 
L 7 HOH A 13 613 129 HOH HOH . 
L 7 HOH A 14 614 88 HOH HOH . 
L 7 HOH A 15 615 77 HOH HOH . 
L 7 HOH A 16 616 47 HOH HOH . 
L 7 HOH A 17 617 13 HOH HOH . 
L 7 HOH A 18 618 73 HOH HOH . 
L 7 HOH A 19 619 79 HOH HOH . 
L 7 HOH A 20 620 87 HOH HOH . 
L 7 HOH A 21 621 85 HOH HOH . 
L 7 HOH A 22 622 14 HOH HOH . 
L 7 HOH A 23 623 89 HOH HOH . 
L 7 HOH A 24 624 80 HOH HOH . 
L 7 HOH A 25 625 7 HOH HOH . 
L 7 HOH A 26 626 76 HOH HOH . 
L 7 HOH A 27 627 96 HOH HOH . 
L 7 HOH A 28 628 34 HOH HOH . 
L 7 HOH A 29 629 50 HOH HOH . 
L 7 HOH A 30 630 101 HOH HOH . 
L 7 HOH A 31 631 110 HOH HOH . 
L 7 HOH A 32 632 106 HOH HOH . 
L 7 HOH A 33 633 128 HOH HOH . 
L 7 HOH A 34 634 116 HOH HOH . 
L 7 HOH A 35 635 35 HOH HOH . 
L 7 HOH A 36 636 33 HOH HOH . 
L 7 HOH A 37 637 134 HOH HOH . 
L 7 HOH A 38 638 41 HOH HOH . 
L 7 HOH A 39 639 16 HOH HOH . 
L 7 HOH A 40 640 112 HOH HOH . 
L 7 HOH A 41 641 26 HOH HOH . 
L 7 HOH A 42 642 72 HOH HOH . 
L 7 HOH A 43 643 103 HOH HOH . 
L 7 HOH A 44 644 36 HOH HOH . 
L 7 HOH A 45 645 121 HOH HOH . 
L 7 HOH A 46 646 69 HOH HOH . 
L 7 HOH A 47 647 23 HOH HOH . 
L 7 HOH A 48 648 5 HOH HOH . 
L 7 HOH A 49 649 19 HOH HOH . 
L 7 HOH A 50 650 115 HOH HOH . 
L 7 HOH A 51 651 91 HOH HOH . 
L 7 HOH A 52 652 37 HOH HOH . 
L 7 HOH A 53 653 67 HOH HOH . 
L 7 HOH A 54 654 31 HOH HOH . 
L 7 HOH A 55 655 102 HOH HOH . 
L 7 HOH A 56 656 83 HOH HOH . 
L 7 HOH A 57 657 28 HOH HOH . 
L 7 HOH A 58 658 125 HOH HOH . 
L 7 HOH A 59 659 98 HOH HOH . 
L 7 HOH A 60 660 92 HOH HOH . 
L 7 HOH A 61 661 81 HOH HOH . 
L 7 HOH A 62 662 6 HOH HOH . 
L 7 HOH A 63 663 65 HOH HOH . 
L 7 HOH A 64 664 42 HOH HOH . 
L 7 HOH A 65 665 4 HOH HOH . 
L 7 HOH A 66 666 108 HOH HOH . 
L 7 HOH A 67 667 15 HOH HOH . 
L 7 HOH A 68 668 107 HOH HOH . 
L 7 HOH A 69 669 64 HOH HOH . 
L 7 HOH A 70 670 113 HOH HOH . 
L 7 HOH A 71 671 12 HOH HOH . 
L 7 HOH A 72 672 40 HOH HOH . 
L 7 HOH A 73 673 58 HOH HOH . 
L 7 HOH A 74 674 63 HOH HOH . 
L 7 HOH A 75 675 111 HOH HOH . 
L 7 HOH A 76 676 57 HOH HOH . 
L 7 HOH A 77 677 141 HOH HOH . 
L 7 HOH A 78 678 51 HOH HOH . 
L 7 HOH A 79 679 10 HOH HOH . 
L 7 HOH A 80 680 20 HOH HOH . 
L 7 HOH A 81 681 22 HOH HOH . 
L 7 HOH A 82 682 53 HOH HOH . 
L 7 HOH A 83 683 2 HOH HOH . 
L 7 HOH A 84 684 120 HOH HOH . 
L 7 HOH A 85 685 48 HOH HOH . 
L 7 HOH A 86 686 29 HOH HOH . 
L 7 HOH A 87 687 78 HOH HOH . 
L 7 HOH A 88 688 124 HOH HOH . 
L 7 HOH A 89 689 30 HOH HOH . 
L 7 HOH A 90 690 138 HOH HOH . 
L 7 HOH A 91 691 75 HOH HOH . 
L 7 HOH A 92 692 60 HOH HOH . 
L 7 HOH A 93 693 52 HOH HOH . 
L 7 HOH A 94 694 93 HOH HOH . 
L 7 HOH A 95 695 133 HOH HOH . 
L 7 HOH A 96 696 44 HOH HOH . 
L 7 HOH A 97 697 39 HOH HOH . 
L 7 HOH A 98 698 114 HOH HOH . 
L 7 HOH A 99 699 24 HOH HOH . 
L 7 HOH A 100 700 66 HOH HOH . 
L 7 HOH A 101 701 84 HOH HOH . 
L 7 HOH A 102 702 122 HOH HOH . 
L 7 HOH A 103 703 137 HOH HOH . 
L 7 HOH A 104 704 95 HOH HOH . 
L 7 HOH A 105 705 56 HOH HOH . 
L 7 HOH A 106 706 17 HOH HOH . 
L 7 HOH A 107 707 71 HOH HOH . 
L 7 HOH A 108 708 49 HOH HOH . 
L 7 HOH A 109 709 8 HOH HOH . 
L 7 HOH A 110 710 123 HOH HOH . 
L 7 HOH A 111 711 38 HOH HOH . 
L 7 HOH A 112 712 43 HOH HOH . 
L 7 HOH A 113 713 1 HOH HOH . 
L 7 HOH A 114 714 86 HOH HOH . 
L 7 HOH A 115 715 117 HOH HOH . 
L 7 HOH A 116 716 109 HOH HOH . 
L 7 HOH A 117 717 3 HOH HOH . 
L 7 HOH A 118 718 82 HOH HOH . 
L 7 HOH A 119 719 9 HOH HOH . 
L 7 HOH A 120 720 105 HOH HOH . 
L 7 HOH A 121 721 139 HOH HOH . 
L 7 HOH A 122 722 62 HOH HOH . 
L 7 HOH A 123 723 32 HOH HOH . 
L 7 HOH A 124 724 25 HOH HOH . 
L 7 HOH A 125 725 45 HOH HOH . 
L 7 HOH A 126 726 54 HOH HOH . 
L 7 HOH A 127 727 27 HOH HOH . 
L 7 HOH A 128 728 99 HOH HOH . 
L 7 HOH A 129 729 143 HOH HOH . 
L 7 HOH A 130 730 68 HOH HOH . 
L 7 HOH A 131 731 90 HOH HOH . 
L 7 HOH A 132 732 97 HOH HOH . 
L 7 HOH A 133 733 94 HOH HOH . 
L 7 HOH A 134 734 135 HOH HOH . 
L 7 HOH A 135 735 55 HOH HOH . 
L 7 HOH A 136 736 104 HOH HOH . 
L 7 HOH A 137 737 74 HOH HOH . 
L 7 HOH A 138 738 140 HOH HOH . 
L 7 HOH A 139 739 136 HOH HOH . 
L 7 HOH A 140 740 119 HOH HOH . 
L 7 HOH A 141 741 100 HOH HOH . 
L 7 HOH A 142 742 132 HOH HOH . 
L 7 HOH A 143 743 127 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               18.565 
_atom_site.Cartn_y               -15.748 
_atom_site.Cartn_z               -18.141 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        47.4 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           503 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#