data_8VW2 # _model_server_result.job_id ZaRllEvTrqbgDmubyzsjLQ _model_server_result.datetime_utc '2024-12-26 13:51:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vw2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":506}' # _entry.id 8VW2 # _exptl.entry_id 8VW2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8VW2 _cell.length_a 58.456 _cell.length_b 69.944 _cell.length_c 100.534 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VW2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 198 A ALA 198 1_555 A N KCX 199 A KCX 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C KCX 199 A KCX 199 1_555 A N LEU 200 A LEU 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A OG SER 117 A SER 117 1_555 F MG MG . A MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc2 A OE2 GLU 158 A GLU 158 1_555 F MG MG . A MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc3 A OG SER 416 A SER 416 1_555 D CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.149 ? metalc ? metalc4 D CA CA . A CA 503 1_555 L O HOH . A HOH 730 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc5 E O1G ATP . A ATP 504 1_555 F MG MG . A MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc6 E O2B ATP . A ATP 504 1_555 F MG MG . A MG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc7 E O3G ATP . A ATP 504 1_555 H MG MG . A MG 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc8 F MG MG . A MG 505 1_555 L O HOH . A HOH 683 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc9 F MG MG . A MG 505 1_555 L O HOH . A HOH 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc10 G MG MG . A MG 506 1_555 L O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc11 G MG MG . A MG 506 1_555 L O HOH . A HOH 633 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc12 G MG MG . A MG 506 1_555 L O HOH . A HOH 736 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc13 G MG MG . A MG 506 1_555 L O HOH . A HOH 743 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc14 H MG MG . A MG 507 1_555 L O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc15 H MG MG . A MG 507 1_555 L O HOH . A HOH 688 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc16 H MG MG . A MG 507 1_555 L O HOH . A HOH 742 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? metalc ? metalc17 I MG MG . A MG 508 1_555 L O HOH . A HOH 608 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc18 I MG MG . A MG 508 1_555 L O HOH . A HOH 637 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc19 I MG MG . A MG 508 1_555 L O HOH . A HOH 690 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc20 I MG MG . A MG 508 1_555 L O HOH . A HOH 734 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc21 I MG MG . A MG 508 1_555 L O HOH . A HOH 739 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8VW2 _atom_sites.fract_transf_matrix[1][1] 0.017107 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014297 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 501 2 CA CA . C 2 CA A 1 502 3 CA CA . D 2 CA A 1 503 4 CA CA . E 3 ATP A 1 504 501 ATP ATP . F 4 MG A 1 505 2 MG MG . G 4 MG A 1 506 3 MG MG . H 4 MG A 1 507 4 MG MG . I 4 MG A 1 508 5 MG MG . J 5 MPD A 1 509 502 MPD MPD . K 6 DMS A 1 510 501 DMS DMS . L 7 HOH A 1 601 46 HOH HOH . L 7 HOH A 2 602 59 HOH HOH . L 7 HOH A 3 603 61 HOH HOH . L 7 HOH A 4 604 130 HOH HOH . L 7 HOH A 5 605 70 HOH HOH . L 7 HOH A 6 606 142 HOH HOH . L 7 HOH A 7 607 126 HOH HOH . L 7 HOH A 8 608 21 HOH HOH . L 7 HOH A 9 609 11 HOH HOH . L 7 HOH A 10 610 118 HOH HOH . L 7 HOH A 11 611 131 HOH HOH . L 7 HOH A 12 612 18 HOH HOH . L 7 HOH A 13 613 129 HOH HOH . L 7 HOH A 14 614 88 HOH HOH . L 7 HOH A 15 615 77 HOH HOH . L 7 HOH A 16 616 47 HOH HOH . L 7 HOH A 17 617 13 HOH HOH . L 7 HOH A 18 618 73 HOH HOH . L 7 HOH A 19 619 79 HOH HOH . L 7 HOH A 20 620 87 HOH HOH . L 7 HOH A 21 621 85 HOH HOH . L 7 HOH A 22 622 14 HOH HOH . L 7 HOH A 23 623 89 HOH HOH . L 7 HOH A 24 624 80 HOH HOH . L 7 HOH A 25 625 7 HOH HOH . L 7 HOH A 26 626 76 HOH HOH . L 7 HOH A 27 627 96 HOH HOH . L 7 HOH A 28 628 34 HOH HOH . L 7 HOH A 29 629 50 HOH HOH . L 7 HOH A 30 630 101 HOH HOH . L 7 HOH A 31 631 110 HOH HOH . L 7 HOH A 32 632 106 HOH HOH . L 7 HOH A 33 633 128 HOH HOH . L 7 HOH A 34 634 116 HOH HOH . L 7 HOH A 35 635 35 HOH HOH . L 7 HOH A 36 636 33 HOH HOH . L 7 HOH A 37 637 134 HOH HOH . L 7 HOH A 38 638 41 HOH HOH . L 7 HOH A 39 639 16 HOH HOH . L 7 HOH A 40 640 112 HOH HOH . L 7 HOH A 41 641 26 HOH HOH . L 7 HOH A 42 642 72 HOH HOH . L 7 HOH A 43 643 103 HOH HOH . L 7 HOH A 44 644 36 HOH HOH . L 7 HOH A 45 645 121 HOH HOH . L 7 HOH A 46 646 69 HOH HOH . L 7 HOH A 47 647 23 HOH HOH . L 7 HOH A 48 648 5 HOH HOH . L 7 HOH A 49 649 19 HOH HOH . L 7 HOH A 50 650 115 HOH HOH . L 7 HOH A 51 651 91 HOH HOH . L 7 HOH A 52 652 37 HOH HOH . L 7 HOH A 53 653 67 HOH HOH . L 7 HOH A 54 654 31 HOH HOH . L 7 HOH A 55 655 102 HOH HOH . L 7 HOH A 56 656 83 HOH HOH . L 7 HOH A 57 657 28 HOH HOH . L 7 HOH A 58 658 125 HOH HOH . L 7 HOH A 59 659 98 HOH HOH . L 7 HOH A 60 660 92 HOH HOH . L 7 HOH A 61 661 81 HOH HOH . L 7 HOH A 62 662 6 HOH HOH . L 7 HOH A 63 663 65 HOH HOH . L 7 HOH A 64 664 42 HOH HOH . L 7 HOH A 65 665 4 HOH HOH . L 7 HOH A 66 666 108 HOH HOH . L 7 HOH A 67 667 15 HOH HOH . L 7 HOH A 68 668 107 HOH HOH . L 7 HOH A 69 669 64 HOH HOH . L 7 HOH A 70 670 113 HOH HOH . L 7 HOH A 71 671 12 HOH HOH . L 7 HOH A 72 672 40 HOH HOH . L 7 HOH A 73 673 58 HOH HOH . L 7 HOH A 74 674 63 HOH HOH . L 7 HOH A 75 675 111 HOH HOH . L 7 HOH A 76 676 57 HOH HOH . L 7 HOH A 77 677 141 HOH HOH . L 7 HOH A 78 678 51 HOH HOH . L 7 HOH A 79 679 10 HOH HOH . L 7 HOH A 80 680 20 HOH HOH . L 7 HOH A 81 681 22 HOH HOH . L 7 HOH A 82 682 53 HOH HOH . L 7 HOH A 83 683 2 HOH HOH . L 7 HOH A 84 684 120 HOH HOH . L 7 HOH A 85 685 48 HOH HOH . L 7 HOH A 86 686 29 HOH HOH . L 7 HOH A 87 687 78 HOH HOH . L 7 HOH A 88 688 124 HOH HOH . L 7 HOH A 89 689 30 HOH HOH . L 7 HOH A 90 690 138 HOH HOH . L 7 HOH A 91 691 75 HOH HOH . L 7 HOH A 92 692 60 HOH HOH . L 7 HOH A 93 693 52 HOH HOH . L 7 HOH A 94 694 93 HOH HOH . L 7 HOH A 95 695 133 HOH HOH . L 7 HOH A 96 696 44 HOH HOH . L 7 HOH A 97 697 39 HOH HOH . L 7 HOH A 98 698 114 HOH HOH . L 7 HOH A 99 699 24 HOH HOH . L 7 HOH A 100 700 66 HOH HOH . L 7 HOH A 101 701 84 HOH HOH . L 7 HOH A 102 702 122 HOH HOH . L 7 HOH A 103 703 137 HOH HOH . L 7 HOH A 104 704 95 HOH HOH . L 7 HOH A 105 705 56 HOH HOH . L 7 HOH A 106 706 17 HOH HOH . L 7 HOH A 107 707 71 HOH HOH . L 7 HOH A 108 708 49 HOH HOH . L 7 HOH A 109 709 8 HOH HOH . L 7 HOH A 110 710 123 HOH HOH . L 7 HOH A 111 711 38 HOH HOH . L 7 HOH A 112 712 43 HOH HOH . L 7 HOH A 113 713 1 HOH HOH . L 7 HOH A 114 714 86 HOH HOH . L 7 HOH A 115 715 117 HOH HOH . L 7 HOH A 116 716 109 HOH HOH . L 7 HOH A 117 717 3 HOH HOH . L 7 HOH A 118 718 82 HOH HOH . L 7 HOH A 119 719 9 HOH HOH . L 7 HOH A 120 720 105 HOH HOH . L 7 HOH A 121 721 139 HOH HOH . L 7 HOH A 122 722 62 HOH HOH . L 7 HOH A 123 723 32 HOH HOH . L 7 HOH A 124 724 25 HOH HOH . L 7 HOH A 125 725 45 HOH HOH . L 7 HOH A 126 726 54 HOH HOH . L 7 HOH A 127 727 27 HOH HOH . L 7 HOH A 128 728 99 HOH HOH . L 7 HOH A 129 729 143 HOH HOH . L 7 HOH A 130 730 68 HOH HOH . L 7 HOH A 131 731 90 HOH HOH . L 7 HOH A 132 732 97 HOH HOH . L 7 HOH A 133 733 94 HOH HOH . L 7 HOH A 134 734 135 HOH HOH . L 7 HOH A 135 735 55 HOH HOH . L 7 HOH A 136 736 104 HOH HOH . L 7 HOH A 137 737 74 HOH HOH . L 7 HOH A 138 738 140 HOH HOH . L 7 HOH A 139 739 136 HOH HOH . L 7 HOH A 140 740 119 HOH HOH . L 7 HOH A 141 741 100 HOH HOH . L 7 HOH A 142 742 132 HOH HOH . L 7 HOH A 143 743 127 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x 10.914 _atom_site.Cartn_y -38.102 _atom_site.Cartn_z -34.843 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 56.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 506 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #