data_8VW8 # _model_server_result.job_id 2mlFlx752ay1BFP3DAyiDQ _model_server_result.datetime_utc '2025-01-11 06:16:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vw8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 8VW8 # _exptl.entry_id 8VW8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8VW8 _cell.length_a 59.634 _cell.length_b 59.634 _cell.length_c 9.003 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VW8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C02 I6W 1 A I6W 1 1_555 A N ALA 2 A ALA 2 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.431 ? covale ? covale2 A C02 I6W 1 A I6W 1 1_555 A N ALA 2 A ALA 2 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.428 ? covale ? covale3 A C ALA 2 A ALA 2 1_555 A N AIB 3 A AIB 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C AIB 3 A AIB 3 1_555 A N ALA 4 A ALA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 A C ALA 4 A ALA 4 1_555 A N AIB 5 A AIB 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C AIB 5 A AIB 5 1_555 A N LEU 6 A LEU 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale7 A C LEU 6 A LEU 6 1_555 A N AIB 7 A AIB 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale8 A C AIB 7 A AIB 7 1_555 A N ALA 8 A ALA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale9 A C ALA 8 A ALA 8 1_555 A N AIB 9 A AIB 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale10 A C AIB 9 A AIB 9 1_555 A N LEU 10 A LEU 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale11 A C LEU 10 A LEU 10 1_555 A N AIB 11 A AIB 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale12 A C AIB 11 A AIB 11 1_555 A N GLN 12 A GLN 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale13 A C GLN 12 A GLN 12 1_555 A N AIB 13 A AIB 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale14 A C AIB 13 A AIB 13 1_555 A N LEU 14 A LEU 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale15 A C LEU 14 A LEU 14 1_555 A N15 I77 15 A I77 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? metalc ? metalc1 A N10 I6W 1 A I6W 1 1_555 B AG AG . A AG 101 4_544 ? A ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc2 A N10 I6W 1 A I6W 1 1_555 B AG AG . A AG 101 4_544 ? B ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc3 A N07 I6W 1 A I6W 1 1_555 B AG AG . A AG 101 4_544 ? A ? ? ? ? ? ? ? ? ? ? 2.697 ? metalc ? metalc4 A N07 I6W 1 A I6W 1 1_555 B AG AG . A AG 101 4_544 ? B ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc5 A N07 I77 15 A I77 15 1_555 B AG AG . A AG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc6 A N10 I77 15 A I77 15 1_555 B AG AG . A AG 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc7 B AG AG . A AG 101 1_555 C O3 NO3 . A NO3 102 3_445 ? ? ? ? A ? ? ? ? ? ? ? 2.036 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 133 n n N O2 NO3 sing 134 n n N O3 NO3 sing 135 n n # _atom_sites.entry_id 8VW8 _atom_sites.fract_transf_matrix[1][1] 0.016769 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016769 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.111074 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AG A 1 101 1 AG AG . C 3 NO3 A 1 102 2 NO3 NO3 . D 4 HOH A 1 201 1 HOH HOH . D 4 HOH A 2 202 3 HOH HOH . D 4 HOH A 3 203 2 HOH HOH . D 4 HOH A 4 204 6 HOH HOH . D 4 HOH A 5 205 8 HOH HOH . D 4 HOH A 6 206 5 HOH HOH . D 4 HOH A 7 207 4 HOH HOH . D 4 HOH A 8 208 7 HOH HOH . D 4 HOH A 9 209 10 HOH HOH . D 4 HOH A 10 210 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . A . C 3 8.39 -8.334 -2.272 0.44 38.36 ? N NO3 102 A 1 HETATM 2 N N NO3 . B . C 3 -13.552 -15.569 4.587 0.56 42.34 ? N NO3 102 A 1 HETATM 3 O O1 NO3 . A . C 3 7.354 -8.703 -1.478 0.44 43.06 ? O1 NO3 102 A 1 HETATM 4 O O1 NO3 . B . C 3 -14.006 -14.976 5.608 0.56 51.44 ? O1 NO3 102 A 1 HETATM 5 O O2 NO3 . A . C 3 8.614 -7.142 -2.997 0.44 43.76 ? O2 NO3 102 A 1 HETATM 6 O O2 NO3 . B . C 3 -14.013 -15.308 3.437 0.56 47.08 ? O2 NO3 102 A 1 HETATM 7 O O3 NO3 . A . C 3 9.405 -9.46 -2.612 0.44 37.26 ? O3 NO3 102 A 1 HETATM 8 O O3 NO3 . B . C 3 -12.637 -16.431 4.71 0.56 39.3 ? O3 NO3 102 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #