data_8VWH # _model_server_result.job_id Oju8qbS0YO4cpQUNucbsTw _model_server_result.datetime_utc '2024-11-07 04:36:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vwh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":401}' # _entry.id 8VWH # _exptl.entry_id 8VWH _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8VWH _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VWH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? octameric 8 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 1 1 A,B,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 132 A CYS 132 1_555 D SG CYS 169 G CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 169 A CYS 169 1_555 D SG CYS 132 G CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 229 A CYS 229 1_555 B SG CYS 229 C CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 C SG CYS 229 E CYS 229 1_555 D SG CYS 229 G CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 D SG CYS 29 G CYS 29 1_555 G SG CYS 29 M CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 E SG CYS 229 I CYS 229 1_555 F SG CYS 229 K CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 F SG CYS 132 K CYS 132 1_555 G SG CYS 169 M CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 F SG CYS 169 K CYS 169 1_555 G SG CYS 132 M CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf9 G SG CYS 229 M CYS 229 1_555 H SG CYS 229 O CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 A SG CYS 18 A CYS 18 1_555 I ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc2 A SG CYS 36 A CYS 36 1_555 I ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc3 A SG CYS 49 A CYS 49 1_555 I ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc4 A ND1 HIS 52 A HIS 52 1_555 I ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc5 B SG CYS 18 C CYS 18 1_555 J ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc6 B SG CYS 36 C CYS 36 1_555 J ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc7 B SG CYS 49 C CYS 49 1_555 J ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc8 B ND1 HIS 52 C HIS 52 1_555 J ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc9 C SG CYS 18 E CYS 18 1_555 K ZN ZN . E ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc10 C SG CYS 36 E CYS 36 1_555 K ZN ZN . E ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc11 C SG CYS 49 E CYS 49 1_555 K ZN ZN . E ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc12 C ND1 HIS 52 E HIS 52 1_555 K ZN ZN . E ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc13 D SG CYS 18 G CYS 18 1_555 L ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc14 D SG CYS 36 G CYS 36 1_555 L ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc15 D SG CYS 49 G CYS 49 1_555 L ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc16 D ND1 HIS 52 G HIS 52 1_555 L ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc17 E SG CYS 18 I CYS 18 1_555 M ZN ZN . I ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc18 E SG CYS 36 I CYS 36 1_555 M ZN ZN . I ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc19 E SG CYS 49 I CYS 49 1_555 M ZN ZN . I ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc20 E ND1 HIS 52 I HIS 52 1_555 M ZN ZN . I ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc21 F SG CYS 18 K CYS 18 1_555 N ZN ZN . K ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc22 F SG CYS 36 K CYS 36 1_555 N ZN ZN . K ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc23 F SG CYS 49 K CYS 49 1_555 N ZN ZN . K ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc24 F ND1 HIS 52 K HIS 52 1_555 N ZN ZN . K ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc25 G SG CYS 18 M CYS 18 1_555 O ZN ZN . M ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc26 G SG CYS 36 M CYS 36 1_555 O ZN ZN . M ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc27 G SG CYS 49 M CYS 49 1_555 O ZN ZN . M ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc28 G ND1 HIS 52 M HIS 52 1_555 O ZN ZN . M ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8VWH _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 ZN A 1 401 401 ZN ZN . J 2 ZN C 1 401 401 ZN ZN . K 2 ZN E 1 401 401 ZN ZN . L 2 ZN G 1 401 401 ZN ZN . M 2 ZN I 1 401 401 ZN ZN . N 2 ZN K 1 401 401 ZN ZN . O 2 ZN M 1 401 401 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 2 _atom_site.Cartn_x 167.286 _atom_site.Cartn_y 215.901 _atom_site.Cartn_z 123.156 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 99.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #