data_8VWK # _model_server_result.job_id 1fQUZ3QKwVjwwx6jokjTHw _model_server_result.datetime_utc '2025-07-07 20:43:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vwk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8VWK # _exptl.entry_id 8VWK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8VWK _cell.length_a 88.722 _cell.length_b 88.722 _cell.length_c 117.975 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VWK _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 397 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 376 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 502 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.351 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 332 n n C1 O2 MYR sing 333 n n C1 C2 MYR sing 334 n n O2 HO2 MYR sing 335 n n C2 C3 MYR sing 336 n n C2 H21 MYR sing 337 n n C2 H22 MYR sing 338 n n C3 C4 MYR sing 339 n n C3 H31 MYR sing 340 n n C3 H32 MYR sing 341 n n C4 C5 MYR sing 342 n n C4 H41 MYR sing 343 n n C4 H42 MYR sing 344 n n C5 C6 MYR sing 345 n n C5 H51 MYR sing 346 n n C5 H52 MYR sing 347 n n C6 C7 MYR sing 348 n n C6 H61 MYR sing 349 n n C6 H62 MYR sing 350 n n C7 C8 MYR sing 351 n n C7 H71 MYR sing 352 n n C7 H72 MYR sing 353 n n C8 C9 MYR sing 354 n n C8 H81 MYR sing 355 n n C8 H82 MYR sing 356 n n C9 C10 MYR sing 357 n n C9 H91 MYR sing 358 n n C9 H92 MYR sing 359 n n C10 C11 MYR sing 360 n n C10 H101 MYR sing 361 n n C10 H102 MYR sing 362 n n C11 C12 MYR sing 363 n n C11 H111 MYR sing 364 n n C11 H112 MYR sing 365 n n C12 C13 MYR sing 366 n n C12 H121 MYR sing 367 n n C12 H122 MYR sing 368 n n C13 C14 MYR sing 369 n n C13 H131 MYR sing 370 n n C13 H132 MYR sing 371 n n C14 H141 MYR sing 372 n n C14 H142 MYR sing 373 n n C14 H143 MYR sing 374 n n # _atom_sites.entry_id 8VWK _atom_sites.fract_transf_matrix[1][1] 0.011271 _atom_sites.fract_transf_matrix[1][2] 0.006507 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013015 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MYR A 1 501 1 MYR MYR . C 3 HEM A 1 502 1 HEM HEM . D 4 GOL A 1 503 1 GOL GOL . E 4 GOL A 1 504 2 GOL GOL . F 4 GOL A 1 505 3 GOL GOL . G 4 GOL A 1 506 4 GOL GOL . H 4 GOL A 1 507 5 GOL GOL . I 5 PEG A 1 508 1 PEG PEG . J 6 HOH A 1 601 1 HOH HOH . J 6 HOH A 2 602 46 HOH HOH . J 6 HOH A 3 603 123 HOH HOH . J 6 HOH A 4 604 81 HOH HOH . J 6 HOH A 5 605 49 HOH HOH . J 6 HOH A 6 606 29 HOH HOH . J 6 HOH A 7 607 52 HOH HOH . J 6 HOH A 8 608 93 HOH HOH . J 6 HOH A 9 609 127 HOH HOH . J 6 HOH A 10 610 45 HOH HOH . J 6 HOH A 11 611 18 HOH HOH . J 6 HOH A 12 612 138 HOH HOH . J 6 HOH A 13 613 69 HOH HOH . J 6 HOH A 14 614 34 HOH HOH . J 6 HOH A 15 615 53 HOH HOH . J 6 HOH A 16 616 133 HOH HOH . J 6 HOH A 17 617 74 HOH HOH . J 6 HOH A 18 618 15 HOH HOH . J 6 HOH A 19 619 7 HOH HOH . J 6 HOH A 20 620 11 HOH HOH . J 6 HOH A 21 621 20 HOH HOH . J 6 HOH A 22 622 5 HOH HOH . J 6 HOH A 23 623 77 HOH HOH . J 6 HOH A 24 624 19 HOH HOH . J 6 HOH A 25 625 70 HOH HOH . J 6 HOH A 26 626 33 HOH HOH . J 6 HOH A 27 627 73 HOH HOH . J 6 HOH A 28 628 57 HOH HOH . J 6 HOH A 29 629 30 HOH HOH . J 6 HOH A 30 630 94 HOH HOH . J 6 HOH A 31 631 4 HOH HOH . J 6 HOH A 32 632 92 HOH HOH . J 6 HOH A 33 633 23 HOH HOH . J 6 HOH A 34 634 63 HOH HOH . J 6 HOH A 35 635 6 HOH HOH . J 6 HOH A 36 636 124 HOH HOH . J 6 HOH A 37 637 8 HOH HOH . J 6 HOH A 38 638 43 HOH HOH . J 6 HOH A 39 639 98 HOH HOH . J 6 HOH A 40 640 24 HOH HOH . J 6 HOH A 41 641 66 HOH HOH . J 6 HOH A 42 642 38 HOH HOH . J 6 HOH A 43 643 36 HOH HOH . J 6 HOH A 44 644 67 HOH HOH . J 6 HOH A 45 645 47 HOH HOH . J 6 HOH A 46 646 40 HOH HOH . J 6 HOH A 47 647 72 HOH HOH . J 6 HOH A 48 648 14 HOH HOH . J 6 HOH A 49 649 75 HOH HOH . J 6 HOH A 50 650 54 HOH HOH . J 6 HOH A 51 651 141 HOH HOH . J 6 HOH A 52 652 35 HOH HOH . J 6 HOH A 53 653 10 HOH HOH . J 6 HOH A 54 654 68 HOH HOH . J 6 HOH A 55 655 102 HOH HOH . J 6 HOH A 56 656 39 HOH HOH . J 6 HOH A 57 657 132 HOH HOH . J 6 HOH A 58 658 21 HOH HOH . J 6 HOH A 59 659 51 HOH HOH . J 6 HOH A 60 660 61 HOH HOH . J 6 HOH A 61 661 60 HOH HOH . J 6 HOH A 62 662 103 HOH HOH . J 6 HOH A 63 663 79 HOH HOH . J 6 HOH A 64 664 13 HOH HOH . J 6 HOH A 65 665 27 HOH HOH . J 6 HOH A 66 666 41 HOH HOH . J 6 HOH A 67 667 71 HOH HOH . J 6 HOH A 68 668 137 HOH HOH . J 6 HOH A 69 669 16 HOH HOH . J 6 HOH A 70 670 55 HOH HOH . J 6 HOH A 71 671 91 HOH HOH . J 6 HOH A 72 672 76 HOH HOH . J 6 HOH A 73 673 42 HOH HOH . J 6 HOH A 74 674 58 HOH HOH . J 6 HOH A 75 675 26 HOH HOH . J 6 HOH A 76 676 22 HOH HOH . J 6 HOH A 77 677 48 HOH HOH . J 6 HOH A 78 678 50 HOH HOH . J 6 HOH A 79 679 31 HOH HOH . J 6 HOH A 80 680 86 HOH HOH . J 6 HOH A 81 681 116 HOH HOH . J 6 HOH A 82 682 105 HOH HOH . J 6 HOH A 83 683 109 HOH HOH . J 6 HOH A 84 684 125 HOH HOH . J 6 HOH A 85 685 90 HOH HOH . J 6 HOH A 86 686 2 HOH HOH . J 6 HOH A 87 687 130 HOH HOH . J 6 HOH A 88 688 89 HOH HOH . J 6 HOH A 89 689 87 HOH HOH . J 6 HOH A 90 690 118 HOH HOH . J 6 HOH A 91 691 120 HOH HOH . J 6 HOH A 92 692 25 HOH HOH . J 6 HOH A 93 693 88 HOH HOH . J 6 HOH A 94 694 56 HOH HOH . J 6 HOH A 95 695 44 HOH HOH . J 6 HOH A 96 696 32 HOH HOH . J 6 HOH A 97 697 9 HOH HOH . J 6 HOH A 98 698 106 HOH HOH . J 6 HOH A 99 699 97 HOH HOH . J 6 HOH A 100 700 101 HOH HOH . J 6 HOH A 101 701 122 HOH HOH . J 6 HOH A 102 702 108 HOH HOH . J 6 HOH A 103 703 128 HOH HOH . J 6 HOH A 104 704 111 HOH HOH . J 6 HOH A 105 705 3 HOH HOH . J 6 HOH A 106 706 107 HOH HOH . J 6 HOH A 107 707 114 HOH HOH . J 6 HOH A 108 708 115 HOH HOH . J 6 HOH A 109 709 17 HOH HOH . J 6 HOH A 110 710 104 HOH HOH . J 6 HOH A 111 711 117 HOH HOH . J 6 HOH A 112 712 37 HOH HOH . J 6 HOH A 113 713 80 HOH HOH . J 6 HOH A 114 714 126 HOH HOH . J 6 HOH A 115 715 12 HOH HOH . J 6 HOH A 116 716 113 HOH HOH . J 6 HOH A 117 717 95 HOH HOH . J 6 HOH A 118 718 129 HOH HOH . J 6 HOH A 119 719 140 HOH HOH . J 6 HOH A 120 720 134 HOH HOH . J 6 HOH A 121 721 112 HOH HOH . J 6 HOH A 122 722 131 HOH HOH . J 6 HOH A 123 723 62 HOH HOH . J 6 HOH A 124 724 121 HOH HOH . J 6 HOH A 125 725 100 HOH HOH . J 6 HOH A 126 726 59 HOH HOH . J 6 HOH A 127 727 136 HOH HOH . J 6 HOH A 128 728 78 HOH HOH . J 6 HOH A 129 729 65 HOH HOH . J 6 HOH A 130 730 83 HOH HOH . J 6 HOH A 131 731 99 HOH HOH . J 6 HOH A 132 732 119 HOH HOH . J 6 HOH A 133 733 110 HOH HOH . J 6 HOH A 134 734 64 HOH HOH . J 6 HOH A 135 735 96 HOH HOH . J 6 HOH A 136 736 139 HOH HOH . J 6 HOH A 137 737 84 HOH HOH . J 6 HOH A 138 738 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . B 2 -0.194 29.598 -10.349 1 54.85 ? C1 MYR 501 A 1 HETATM 2 O O1 MYR . . . B 2 -0.291 28.379 -10.081 1 53.8 ? O1 MYR 501 A 1 HETATM 3 O O2 MYR . . . B 2 -0.327 30.43 -9.422 1 50.02 ? O2 MYR 501 A 1 HETATM 4 C C2 MYR . . . B 2 0.07 30.061 -11.767 1 50.77 ? C2 MYR 501 A 1 HETATM 5 C C3 MYR . . . B 2 1.565 30.144 -12.074 1 52.52 ? C3 MYR 501 A 1 HETATM 6 C C4 MYR . . . B 2 2.212 28.768 -12.183 1 52.79 ? C4 MYR 501 A 1 HETATM 7 C C5 MYR . . . B 2 3.719 28.87 -12.412 1 55.34 ? C5 MYR 501 A 1 HETATM 8 C C6 MYR . . . B 2 4.377 27.494 -12.339 1 59.85 ? C6 MYR 501 A 1 HETATM 9 C C7 MYR . . . B 2 5.879 27.568 -12.602 1 58.1 ? C7 MYR 501 A 1 HETATM 10 C C8 MYR . . . B 2 6.523 26.19 -12.491 1 60.81 ? C8 MYR 501 A 1 HETATM 11 C C9 MYR . . . B 2 7.934 26.194 -13.066 1 59.92 ? C9 MYR 501 A 1 HETATM 12 C C10 MYR . . . B 2 8.7 24.916 -12.73 1 58.61 ? C10 MYR 501 A 1 HETATM 13 C C11 MYR . . . B 2 10.004 24.869 -13.521 1 60.15 ? C11 MYR 501 A 1 HETATM 14 C C12 MYR . . . B 2 11.024 23.92 -12.907 1 61.69 ? C12 MYR 501 A 1 HETATM 15 C C13 MYR . . . B 2 10.696 22.466 -13.204 1 57.8 ? C13 MYR 501 A 1 HETATM 16 C C14 MYR . . . B 2 11.842 21.556 -12.767 1 58.61 ? C14 MYR 501 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 16 #