data_8VWR # _model_server_result.job_id 5ojYPNaSGySJkIHgW5V05w _model_server_result.datetime_utc '2024-11-14 18:46:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vwr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 8VWR # _exptl.entry_id 8VWR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8VWR _cell.length_a 95.28 _cell.length_b 95.28 _cell.length_c 98.59 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VWR _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 253 n n O1 HO1 PG4 sing 254 n n C1 C2 PG4 sing 255 n n C1 H11 PG4 sing 256 n n C1 H12 PG4 sing 257 n n C2 O2 PG4 sing 258 n n C2 H21 PG4 sing 259 n n C2 H22 PG4 sing 260 n n O2 C3 PG4 sing 261 n n C3 C4 PG4 sing 262 n n C3 H31 PG4 sing 263 n n C3 H32 PG4 sing 264 n n C4 O3 PG4 sing 265 n n C4 H41 PG4 sing 266 n n C4 H42 PG4 sing 267 n n O3 C5 PG4 sing 268 n n C5 C6 PG4 sing 269 n n C5 H51 PG4 sing 270 n n C5 H52 PG4 sing 271 n n C6 O4 PG4 sing 272 n n C6 H61 PG4 sing 273 n n C6 H62 PG4 sing 274 n n O4 C7 PG4 sing 275 n n C7 C8 PG4 sing 276 n n C7 H71 PG4 sing 277 n n C7 H72 PG4 sing 278 n n C8 O5 PG4 sing 279 n n C8 H81 PG4 sing 280 n n C8 H82 PG4 sing 281 n n O5 HO5 PG4 sing 282 n n # _atom_sites.entry_id 8VWR _atom_sites.fract_transf_matrix[1][1] 0.010495 _atom_sites.fract_transf_matrix[1][2] 0.00606 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012119 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010143 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGE A 1 401 401 PGE PGE . D 3 PEG A 1 402 5 PEG PEG . E 3 PEG A 1 403 9 PEG PEG . F 4 CL A 1 404 2 CL CL . G 5 PG4 B 1 401 401 PG4 PG4 . H 3 PEG B 1 402 6 PEG PEG . I 3 PEG B 1 403 7 PEG PEG . J 3 PEG B 1 404 8 PEG PEG . K 4 CL B 1 405 3 CL CL . L 6 HOH A 1 501 15 HOH HOH . L 6 HOH A 2 502 5 HOH HOH . L 6 HOH A 3 503 3 HOH HOH . L 6 HOH A 4 504 18 HOH HOH . L 6 HOH A 5 505 101 HOH HOH . L 6 HOH A 6 506 4 HOH HOH . L 6 HOH A 7 507 79 HOH HOH . L 6 HOH A 8 508 17 HOH HOH . L 6 HOH A 9 509 81 HOH HOH . L 6 HOH A 10 510 36 HOH HOH . L 6 HOH A 11 511 11 HOH HOH . L 6 HOH A 12 512 64 HOH HOH . L 6 HOH A 13 513 7 HOH HOH . L 6 HOH A 14 514 69 HOH HOH . L 6 HOH A 15 515 43 HOH HOH . L 6 HOH A 16 516 77 HOH HOH . L 6 HOH A 17 517 8 HOH HOH . L 6 HOH A 18 518 19 HOH HOH . L 6 HOH A 19 519 65 HOH HOH . L 6 HOH A 20 520 52 HOH HOH . L 6 HOH A 21 521 42 HOH HOH . L 6 HOH A 22 522 76 HOH HOH . L 6 HOH A 23 523 57 HOH HOH . L 6 HOH A 24 524 54 HOH HOH . L 6 HOH A 25 525 83 HOH HOH . L 6 HOH A 26 526 9 HOH HOH . L 6 HOH A 27 527 100 HOH HOH . L 6 HOH A 28 528 98 HOH HOH . L 6 HOH A 29 529 73 HOH HOH . L 6 HOH A 30 530 102 HOH HOH . L 6 HOH A 31 531 58 HOH HOH . L 6 HOH A 32 532 28 HOH HOH . L 6 HOH A 33 533 84 HOH HOH . L 6 HOH A 34 534 46 HOH HOH . L 6 HOH A 35 535 78 HOH HOH . L 6 HOH A 36 536 97 HOH HOH . L 6 HOH A 37 537 67 HOH HOH . L 6 HOH A 38 538 95 HOH HOH . L 6 HOH A 39 539 90 HOH HOH . L 6 HOH A 40 540 63 HOH HOH . L 6 HOH A 41 541 96 HOH HOH . L 6 HOH A 42 542 34 HOH HOH . L 6 HOH A 43 543 70 HOH HOH . L 6 HOH A 44 544 56 HOH HOH . L 6 HOH A 45 545 103 HOH HOH . L 6 HOH A 46 546 85 HOH HOH . L 6 HOH A 47 547 47 HOH HOH . M 6 HOH B 1 501 20 HOH HOH . M 6 HOH B 2 502 23 HOH HOH . M 6 HOH B 3 503 59 HOH HOH . M 6 HOH B 4 504 22 HOH HOH . M 6 HOH B 5 505 49 HOH HOH . M 6 HOH B 6 506 48 HOH HOH . M 6 HOH B 7 507 33 HOH HOH . M 6 HOH B 8 508 53 HOH HOH . M 6 HOH B 9 509 41 HOH HOH . M 6 HOH B 10 510 12 HOH HOH . M 6 HOH B 11 511 29 HOH HOH . M 6 HOH B 12 512 66 HOH HOH . M 6 HOH B 13 513 71 HOH HOH . M 6 HOH B 14 514 6 HOH HOH . M 6 HOH B 15 515 35 HOH HOH . M 6 HOH B 16 516 25 HOH HOH . M 6 HOH B 17 517 50 HOH HOH . M 6 HOH B 18 518 16 HOH HOH . M 6 HOH B 19 519 89 HOH HOH . M 6 HOH B 20 520 31 HOH HOH . M 6 HOH B 21 521 51 HOH HOH . M 6 HOH B 22 522 1 HOH HOH . M 6 HOH B 23 523 30 HOH HOH . M 6 HOH B 24 524 45 HOH HOH . M 6 HOH B 25 525 27 HOH HOH . M 6 HOH B 26 526 21 HOH HOH . M 6 HOH B 27 527 75 HOH HOH . M 6 HOH B 28 528 93 HOH HOH . M 6 HOH B 29 529 44 HOH HOH . M 6 HOH B 30 530 86 HOH HOH . M 6 HOH B 31 531 14 HOH HOH . M 6 HOH B 32 532 60 HOH HOH . M 6 HOH B 33 533 26 HOH HOH . M 6 HOH B 34 534 2 HOH HOH . M 6 HOH B 35 535 55 HOH HOH . M 6 HOH B 36 536 38 HOH HOH . M 6 HOH B 37 537 13 HOH HOH . M 6 HOH B 38 538 61 HOH HOH . M 6 HOH B 39 539 32 HOH HOH . M 6 HOH B 40 540 91 HOH HOH . M 6 HOH B 41 541 92 HOH HOH . M 6 HOH B 42 542 74 HOH HOH . M 6 HOH B 43 543 87 HOH HOH . M 6 HOH B 44 544 94 HOH HOH . M 6 HOH B 45 545 104 HOH HOH . M 6 HOH B 46 546 99 HOH HOH . M 6 HOH B 47 547 37 HOH HOH . M 6 HOH B 48 548 80 HOH HOH . M 6 HOH B 49 549 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . G 5 24.162 -17.784 -8.966 1 138.69 ? O1 PG4 401 B 1 HETATM 2 C C1 PG4 . . . G 5 24.431 -18.355 -7.697 1 111.83 ? C1 PG4 401 B 1 HETATM 3 C C2 PG4 . . . G 5 25.109 -17.373 -6.791 1 117.65 ? C2 PG4 401 B 1 HETATM 4 O O2 PG4 . . . G 5 26.315 -17.94 -6.299 1 87.78 ? O2 PG4 401 B 1 HETATM 5 C C3 PG4 . . . G 5 26.779 -17.323 -5.106 1 99.21 ? C3 PG4 401 B 1 HETATM 6 C C4 PG4 . . . G 5 27.025 -15.868 -5.34 1 123.92 ? C4 PG4 401 B 1 HETATM 7 O O3 PG4 . . . G 5 28.07 -15.407 -4.493 1 110.16 ? O3 PG4 401 B 1 HETATM 8 C C5 PG4 . . . G 5 28.658 -14.269 -5.11 1 122.06 ? C5 PG4 401 B 1 HETATM 9 C C6 PG4 . . . G 5 29.168 -13.335 -4.06 1 114.13 ? C6 PG4 401 B 1 HETATM 10 O O4 PG4 . . . G 5 30.588 -13.265 -4.109 1 108.45 ? O4 PG4 401 B 1 HETATM 11 C C7 PG4 . . . G 5 30.98 -12.191 -3.266 1 120.51 ? C7 PG4 401 B 1 HETATM 12 C C8 PG4 . . . G 5 32.423 -12.341 -2.888 1 103.67 ? C8 PG4 401 B 1 HETATM 13 O O5 PG4 . . . G 5 32.826 -11.244 -2.083 1 91.4 ? O5 PG4 401 B 1 HETATM 14 H HO1 PG4 . . . G 5 24.892 -17.448 -9.244 1 166.52 ? HO1 PG4 401 B 1 HETATM 15 H H11 PG4 . . . G 5 23.595 -18.633 -7.291 1 134.29 ? H11 PG4 401 B 1 HETATM 16 H H12 PG4 . . . G 5 25.007 -19.127 -7.812 1 134.29 ? H12 PG4 401 B 1 HETATM 17 H H21 PG4 . . . G 5 25.31 -16.563 -7.285 1 141.28 ? H21 PG4 401 B 1 HETATM 18 H H22 PG4 . . . G 5 24.524 -17.161 -6.048 1 141.28 ? H22 PG4 401 B 1 HETATM 19 H H31 PG4 . . . G 5 26.112 -17.428 -4.41 1 119.15 ? H31 PG4 401 B 1 HETATM 20 H H32 PG4 . . . G 5 27.606 -17.747 -4.827 1 119.15 ? H32 PG4 401 B 1 HETATM 21 H H41 PG4 . . . G 5 27.279 -15.731 -6.266 1 148.8 ? H41 PG4 401 B 1 HETATM 22 H H42 PG4 . . . G 5 26.214 -15.372 -5.148 1 148.8 ? H42 PG4 401 B 1 HETATM 23 H H51 PG4 . . . G 5 29.394 -14.552 -5.675 1 146.57 ? H51 PG4 401 B 1 HETATM 24 H H52 PG4 . . . G 5 27.993 -13.815 -5.65 1 146.57 ? H52 PG4 401 B 1 HETATM 25 H H61 PG4 . . . G 5 28.8 -12.451 -4.212 1 137.05 ? H61 PG4 401 B 1 HETATM 26 H H62 PG4 . . . G 5 28.894 -13.655 -3.186 1 137.05 ? H62 PG4 401 B 1 HETATM 27 H H71 PG4 . . . G 5 30.855 -11.351 -3.735 1 144.71 ? H71 PG4 401 B 1 HETATM 28 H H72 PG4 . . . G 5 30.435 -12.196 -2.463 1 144.71 ? H72 PG4 401 B 1 HETATM 29 H H81 PG4 . . . G 5 32.543 -13.165 -2.391 1 124.5 ? H81 PG4 401 B 1 HETATM 30 H H82 PG4 . . . G 5 32.966 -12.366 -3.692 1 124.5 ? H82 PG4 401 B 1 HETATM 31 H HO5 PG4 . . . G 5 32.119 -10.837 -1.848 1 109.78 ? HO5 PG4 401 B 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 357 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #