data_8VWR # _model_server_result.job_id XGxCOGmztDObn9ruRk7PKg _model_server_result.datetime_utc '2024-11-14 19:13:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vwr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":404}' # _entry.id 8VWR # _exptl.entry_id 8VWR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8VWR _cell.length_a 95.28 _cell.length_b 95.28 _cell.length_c 98.59 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VWR _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 H N N ? 3 I N N ? 3 J N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 237 n n C1 C2 PEG sing 238 n n C1 H11 PEG sing 239 n n C1 H12 PEG sing 240 n n O1 HO1 PEG sing 241 n n C2 O2 PEG sing 242 n n C2 H21 PEG sing 243 n n C2 H22 PEG sing 244 n n O2 C3 PEG sing 245 n n C3 C4 PEG sing 246 n n C3 H31 PEG sing 247 n n C3 H32 PEG sing 248 n n C4 O4 PEG sing 249 n n C4 H41 PEG sing 250 n n C4 H42 PEG sing 251 n n O4 HO4 PEG sing 252 n n # _atom_sites.entry_id 8VWR _atom_sites.fract_transf_matrix[1][1] 0.010495 _atom_sites.fract_transf_matrix[1][2] 0.00606 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012119 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010143 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGE A 1 401 401 PGE PGE . D 3 PEG A 1 402 5 PEG PEG . E 3 PEG A 1 403 9 PEG PEG . F 4 CL A 1 404 2 CL CL . G 5 PG4 B 1 401 401 PG4 PG4 . H 3 PEG B 1 402 6 PEG PEG . I 3 PEG B 1 403 7 PEG PEG . J 3 PEG B 1 404 8 PEG PEG . K 4 CL B 1 405 3 CL CL . L 6 HOH A 1 501 15 HOH HOH . L 6 HOH A 2 502 5 HOH HOH . L 6 HOH A 3 503 3 HOH HOH . L 6 HOH A 4 504 18 HOH HOH . L 6 HOH A 5 505 101 HOH HOH . L 6 HOH A 6 506 4 HOH HOH . L 6 HOH A 7 507 79 HOH HOH . L 6 HOH A 8 508 17 HOH HOH . L 6 HOH A 9 509 81 HOH HOH . L 6 HOH A 10 510 36 HOH HOH . L 6 HOH A 11 511 11 HOH HOH . L 6 HOH A 12 512 64 HOH HOH . L 6 HOH A 13 513 7 HOH HOH . L 6 HOH A 14 514 69 HOH HOH . L 6 HOH A 15 515 43 HOH HOH . L 6 HOH A 16 516 77 HOH HOH . L 6 HOH A 17 517 8 HOH HOH . L 6 HOH A 18 518 19 HOH HOH . L 6 HOH A 19 519 65 HOH HOH . L 6 HOH A 20 520 52 HOH HOH . L 6 HOH A 21 521 42 HOH HOH . L 6 HOH A 22 522 76 HOH HOH . L 6 HOH A 23 523 57 HOH HOH . L 6 HOH A 24 524 54 HOH HOH . L 6 HOH A 25 525 83 HOH HOH . L 6 HOH A 26 526 9 HOH HOH . L 6 HOH A 27 527 100 HOH HOH . L 6 HOH A 28 528 98 HOH HOH . L 6 HOH A 29 529 73 HOH HOH . L 6 HOH A 30 530 102 HOH HOH . L 6 HOH A 31 531 58 HOH HOH . L 6 HOH A 32 532 28 HOH HOH . L 6 HOH A 33 533 84 HOH HOH . L 6 HOH A 34 534 46 HOH HOH . L 6 HOH A 35 535 78 HOH HOH . L 6 HOH A 36 536 97 HOH HOH . L 6 HOH A 37 537 67 HOH HOH . L 6 HOH A 38 538 95 HOH HOH . L 6 HOH A 39 539 90 HOH HOH . L 6 HOH A 40 540 63 HOH HOH . L 6 HOH A 41 541 96 HOH HOH . L 6 HOH A 42 542 34 HOH HOH . L 6 HOH A 43 543 70 HOH HOH . L 6 HOH A 44 544 56 HOH HOH . L 6 HOH A 45 545 103 HOH HOH . L 6 HOH A 46 546 85 HOH HOH . L 6 HOH A 47 547 47 HOH HOH . M 6 HOH B 1 501 20 HOH HOH . M 6 HOH B 2 502 23 HOH HOH . M 6 HOH B 3 503 59 HOH HOH . M 6 HOH B 4 504 22 HOH HOH . M 6 HOH B 5 505 49 HOH HOH . M 6 HOH B 6 506 48 HOH HOH . M 6 HOH B 7 507 33 HOH HOH . M 6 HOH B 8 508 53 HOH HOH . M 6 HOH B 9 509 41 HOH HOH . M 6 HOH B 10 510 12 HOH HOH . M 6 HOH B 11 511 29 HOH HOH . M 6 HOH B 12 512 66 HOH HOH . M 6 HOH B 13 513 71 HOH HOH . M 6 HOH B 14 514 6 HOH HOH . M 6 HOH B 15 515 35 HOH HOH . M 6 HOH B 16 516 25 HOH HOH . M 6 HOH B 17 517 50 HOH HOH . M 6 HOH B 18 518 16 HOH HOH . M 6 HOH B 19 519 89 HOH HOH . M 6 HOH B 20 520 31 HOH HOH . M 6 HOH B 21 521 51 HOH HOH . M 6 HOH B 22 522 1 HOH HOH . M 6 HOH B 23 523 30 HOH HOH . M 6 HOH B 24 524 45 HOH HOH . M 6 HOH B 25 525 27 HOH HOH . M 6 HOH B 26 526 21 HOH HOH . M 6 HOH B 27 527 75 HOH HOH . M 6 HOH B 28 528 93 HOH HOH . M 6 HOH B 29 529 44 HOH HOH . M 6 HOH B 30 530 86 HOH HOH . M 6 HOH B 31 531 14 HOH HOH . M 6 HOH B 32 532 60 HOH HOH . M 6 HOH B 33 533 26 HOH HOH . M 6 HOH B 34 534 2 HOH HOH . M 6 HOH B 35 535 55 HOH HOH . M 6 HOH B 36 536 38 HOH HOH . M 6 HOH B 37 537 13 HOH HOH . M 6 HOH B 38 538 61 HOH HOH . M 6 HOH B 39 539 32 HOH HOH . M 6 HOH B 40 540 91 HOH HOH . M 6 HOH B 41 541 92 HOH HOH . M 6 HOH B 42 542 74 HOH HOH . M 6 HOH B 43 543 87 HOH HOH . M 6 HOH B 44 544 94 HOH HOH . M 6 HOH B 45 545 104 HOH HOH . M 6 HOH B 46 546 99 HOH HOH . M 6 HOH B 47 547 37 HOH HOH . M 6 HOH B 48 548 80 HOH HOH . M 6 HOH B 49 549 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . J 3 49.592 -29.241 -4.211 1 92.48 ? C1 PEG 404 B 1 HETATM 2 O O1 PEG . . . J 3 48.784 -28.67 -3.197 1 94.29 ? O1 PEG 404 B 1 HETATM 3 C C2 PEG . . . J 3 49.002 -30.52 -4.719 1 90.91 ? C2 PEG 404 B 1 HETATM 4 O O2 PEG . . . J 3 50.03 -31.487 -4.878 1 96.93 ? O2 PEG 404 B 1 HETATM 5 C C3 PEG . . . J 3 50.3 -32.212 -3.687 1 96.38 ? C3 PEG 404 B 1 HETATM 6 C C4 PEG . . . J 3 51.773 -32.46 -3.58 1 94.69 ? C4 PEG 404 B 1 HETATM 7 O O4 PEG . . . J 3 52.499 -31.243 -3.526 1 91.15 ? O4 PEG 404 B 1 HETATM 8 H H11 PEG . . . J 3 49.667 -28.614 -4.946 1 111.07 ? H11 PEG 404 B 1 HETATM 9 H H12 PEG . . . J 3 50.473 -29.422 -3.848 1 111.07 ? H12 PEG 404 B 1 HETATM 10 H HO1 PEG . . . J 3 48.541 -29.224 -2.6 1 113.24 ? HO1 PEG 404 B 1 HETATM 11 H H21 PEG . . . J 3 48.345 -30.848 -4.085 1 109.19 ? H21 PEG 404 B 1 HETATM 12 H H22 PEG . . . J 3 48.573 -30.361 -5.574 1 109.19 ? H22 PEG 404 B 1 HETATM 13 H H31 PEG . . . J 3 50.001 -31.698 -2.921 1 115.74 ? H31 PEG 404 B 1 HETATM 14 H H32 PEG . . . J 3 49.83 -33.06 -3.711 1 115.74 ? H32 PEG 404 B 1 HETATM 15 H H41 PEG . . . J 3 51.95 -32.969 -2.773 1 113.72 ? H41 PEG 404 B 1 HETATM 16 H H42 PEG . . . J 3 52.065 -32.968 -4.352 1 113.72 ? H42 PEG 404 B 1 HETATM 17 H HO4 PEG . . . J 3 53.34 -31.344 -3.464 1 109.48 ? HO4 PEG 404 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #