data_8VWZ # _model_server_result.job_id O_MRS1hDdhtQNKUnl2D1yQ _model_server_result.datetime_utc '2024-12-29 14:54:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vwz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8VWZ # _exptl.entry_id 8VWZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 710.817 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-(4-hydroxyphenyl)-3-[6-[[(3~{S})-3-(morpholin-4-ylmethyl)-3,4-dihydro-1~{H}-isoquinolin-2-yl]carbonyl]-1,3-benzodioxol-5-yl]-~{N}-phenyl-5,6,7,8-tetrahydroindolizine-1-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8VWZ _cell.length_a 45.26 _cell.length_b 96.55 _cell.length_c 125.19 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VWZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C43 H42 N4 O6' _chem_comp.formula_weight 710.817 _chem_comp.id F3Q _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-(4-hydroxyphenyl)-3-[6-[[(3~{S})-3-(morpholin-4-ylmethyl)-3,4-dihydro-1~{H}-isoquinolin-2-yl]carbonyl]-1,3-benzodioxol-5-yl]-~{N}-phenyl-5,6,7,8-tetrahydroindolizine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 O20 F3Q sing 83 n n C19 O18 F3Q sing 84 n n O20 C16 F3Q sing 85 n n O18 C17 F3Q sing 86 n n C16 C17 F3Q doub 87 n y C16 C34 F3Q sing 88 n y C17 C14 F3Q sing 89 n y C34 C15 F3Q doub 90 n y C14 C13 F3Q doub 91 n y O53 C45 F3Q sing 92 n n C15 C13 F3Q sing 93 n y C15 C21 F3Q sing 94 n n C13 C7 F3Q sing 95 n n C45 C44 F3Q doub 96 n y C45 C46 F3Q sing 97 n y C3 N6 F3Q sing 98 n n C3 C4 F3Q sing 99 n n C44 C43 F3Q sing 100 n y C21 O23 F3Q doub 101 n n C21 N22 F3Q sing 102 n n C7 N6 F3Q sing 103 n y C7 C8 F3Q doub 104 n y C26 N22 F3Q sing 105 n n C26 C27 F3Q sing 106 n n N6 C5 F3Q sing 107 n y N22 C24 F3Q sing 108 n n C46 C47 F3Q doub 109 n y C32 C27 F3Q doub 110 n y C32 C31 F3Q sing 111 n y C8 C9 F3Q sing 112 n y C4 C2 F3Q sing 113 n n C43 C41 F3Q doub 114 n y C27 C28 F3Q sing 115 n y C31 C30 F3Q doub 116 n y C36 C37 F3Q sing 117 n n C36 N35 F3Q sing 118 n n C5 C9 F3Q doub 119 n y C5 C1 F3Q sing 120 n n C47 C41 F3Q sing 121 n y C33 C24 F3Q sing 122 n n C33 N35 F3Q sing 123 n n C2 C1 F3Q sing 124 n n O38 C37 F3Q sing 125 n n O38 C39 F3Q sing 126 n n C24 C25 F3Q sing 127 n n C9 C10 F3Q sing 128 n n C41 N12 F3Q sing 129 n n C40 N35 F3Q sing 130 n n C40 C39 F3Q sing 131 n n C28 C25 F3Q sing 132 n n C28 C29 F3Q doub 133 n y C30 C29 F3Q sing 134 n y C10 N12 F3Q sing 135 n n C10 O11 F3Q doub 136 n n N12 C42 F3Q sing 137 n n C42 C48 F3Q doub 138 n y C42 C52 F3Q sing 139 n y C48 C49 F3Q sing 140 n y C52 C51 F3Q doub 141 n y C49 C50 F3Q doub 142 n y C51 C50 F3Q sing 143 n y C1 H1 F3Q sing 144 n n C1 H2 F3Q sing 145 n n C2 H3 F3Q sing 146 n n C2 H4 F3Q sing 147 n n C3 H5 F3Q sing 148 n n C3 H6 F3Q sing 149 n n C4 H7 F3Q sing 150 n n C4 H8 F3Q sing 151 n n C8 H9 F3Q sing 152 n n C14 H10 F3Q sing 153 n n C19 H11 F3Q sing 154 n n C24 H12 F3Q sing 155 n n C25 H13 F3Q sing 156 n n C25 H14 F3Q sing 157 n n C26 H15 F3Q sing 158 n n C26 H16 F3Q sing 159 n n C29 H17 F3Q sing 160 n n C30 H18 F3Q sing 161 n n C31 H19 F3Q sing 162 n n C32 H20 F3Q sing 163 n n C33 H21 F3Q sing 164 n n C33 H22 F3Q sing 165 n n C34 H23 F3Q sing 166 n n C36 H25 F3Q sing 167 n n C36 H26 F3Q sing 168 n n C37 H27 F3Q sing 169 n n C37 H28 F3Q sing 170 n n C39 H29 F3Q sing 171 n n C39 H30 F3Q sing 172 n n C40 H31 F3Q sing 173 n n C40 H32 F3Q sing 174 n n C43 H33 F3Q sing 175 n n C44 H34 F3Q sing 176 n n C46 H35 F3Q sing 177 n n C47 H36 F3Q sing 178 n n C48 H37 F3Q sing 179 n n C49 H38 F3Q sing 180 n n C50 H39 F3Q sing 181 n n C51 H40 F3Q sing 182 n n C52 H41 F3Q sing 183 n n O53 H42 F3Q sing 184 n n C19 H24 F3Q sing 185 n n # _atom_sites.entry_id 8VWZ _atom_sites.fract_transf_matrix[1][1] 0.022095 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010357 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007988 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 F3Q A 1 301 1 F3Q F3Q . C 3 PEG A 1 302 1 PEG PEG . D 4 HOH A 1 401 16 HOH HOH . D 4 HOH A 2 402 1 HOH HOH . D 4 HOH A 3 403 4 HOH HOH . D 4 HOH A 4 404 11 HOH HOH . D 4 HOH A 5 405 15 HOH HOH . D 4 HOH A 6 406 29 HOH HOH . D 4 HOH A 7 407 3 HOH HOH . D 4 HOH A 8 408 22 HOH HOH . D 4 HOH A 9 409 30 HOH HOH . D 4 HOH A 10 410 13 HOH HOH . D 4 HOH A 11 411 31 HOH HOH . D 4 HOH A 12 412 20 HOH HOH . D 4 HOH A 13 413 2 HOH HOH . D 4 HOH A 14 414 23 HOH HOH . D 4 HOH A 15 415 5 HOH HOH . D 4 HOH A 16 416 25 HOH HOH . D 4 HOH A 17 417 28 HOH HOH . D 4 HOH A 18 418 6 HOH HOH . D 4 HOH A 19 419 9 HOH HOH . D 4 HOH A 20 420 26 HOH HOH . D 4 HOH A 21 421 21 HOH HOH . D 4 HOH A 22 422 18 HOH HOH . D 4 HOH A 23 423 12 HOH HOH . D 4 HOH A 24 424 17 HOH HOH . D 4 HOH A 25 425 10 HOH HOH . D 4 HOH A 26 426 14 HOH HOH . D 4 HOH A 27 427 19 HOH HOH . D 4 HOH A 28 428 27 HOH HOH . D 4 HOH A 29 429 7 HOH HOH . D 4 HOH A 30 430 24 HOH HOH . D 4 HOH A 31 431 32 HOH HOH . D 4 HOH A 32 432 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 F3Q . . . B 2 11.759 39.945 -7.056 1 50.34 ? C1 F3Q 301 A 1 HETATM 2 C C2 F3Q . . . B 2 11.149 39.787 -5.674 1 47.96 ? C2 F3Q 301 A 1 HETATM 3 C C3 F3Q . . . B 2 8.89 40.544 -6.399 1 44.43 ? C3 F3Q 301 A 1 HETATM 4 C C4 F3Q . . . B 2 10.039 40.792 -5.452 1 48.23 ? C4 F3Q 301 A 1 HETATM 5 C C5 F3Q . . . B 2 10.724 40.168 -8.115 1 48.07 ? C5 F3Q 301 A 1 HETATM 6 N N6 F3Q . . . B 2 9.388 40.421 -7.783 1 47.23 ? N6 F3Q 301 A 1 HETATM 7 C C7 F3Q . . . B 2 8.646 40.576 -8.961 1 44.95 ? C7 F3Q 301 A 1 HETATM 8 C C8 F3Q . . . B 2 9.509 40.424 -10.016 1 46.59 ? C8 F3Q 301 A 1 HETATM 9 C C9 F3Q . . . B 2 10.812 40.168 -9.499 1 46.15 ? C9 F3Q 301 A 1 HETATM 10 C C10 F3Q . . . B 2 12.074 39.959 -10.28 1 47.99 ? C10 F3Q 301 A 1 HETATM 11 O O11 F3Q . . . B 2 13.157 40.26 -9.791 1 50.63 ? O11 F3Q 301 A 1 HETATM 12 N N12 F3Q . . . B 2 12.024 39.423 -11.591 1 47.82 ? N12 F3Q 301 A 1 HETATM 13 C C13 F3Q . . . B 2 7.197 40.871 -8.97 1 42.28 ? C13 F3Q 301 A 1 HETATM 14 C C14 F3Q . . . B 2 6.288 39.85 -8.676 1 42.88 ? C14 F3Q 301 A 1 HETATM 15 C C15 F3Q . . . B 2 6.736 42.17 -9.257 1 43.24 ? C15 F3Q 301 A 1 HETATM 16 C C16 F3Q . . . B 2 4.497 41.424 -8.957 1 41.52 ? C16 F3Q 301 A 1 HETATM 17 C C17 F3Q . . . B 2 4.94 40.158 -8.674 1 43.85 ? C17 F3Q 301 A 1 HETATM 18 O O18 F3Q . . . B 2 3.879 39.341 -8.364 1 43.53 ? O18 F3Q 301 A 1 HETATM 19 C C19 F3Q . . . B 2 2.744 40.209 -8.303 1 42.26 ? C19 F3Q 301 A 1 HETATM 20 O O20 F3Q . . . B 2 3.119 41.465 -8.868 1 43.58 ? O20 F3Q 301 A 1 HETATM 21 C C21 F3Q . . . B 2 7.722 43.277 -9.499 1 45.22 ? C21 F3Q 301 A 1 HETATM 22 N N22 F3Q . . . B 2 8.014 43.619 -10.772 1 41.62 ? N22 F3Q 301 A 1 HETATM 23 O O23 F3Q . . . B 2 8.254 43.825 -8.552 1 49.5 ? O23 F3Q 301 A 1 HETATM 24 C C24 F3Q . . . B 2 9.116 44.553 -11.053 1 43.75 ? C24 F3Q 301 A 1 HETATM 25 C C25 F3Q . . . B 2 10.192 43.832 -11.855 1 43.03 ? C25 F3Q 301 A 1 HETATM 26 C C26 F3Q . . . B 2 7.321 43.078 -11.944 1 45.85 ? C26 F3Q 301 A 1 HETATM 27 C C27 F3Q . . . B 2 8.262 42.731 -13.074 1 43.22 ? C27 F3Q 301 A 1 HETATM 28 C C28 F3Q . . . B 2 9.617 43.102 -13.044 1 44.8 ? C28 F3Q 301 A 1 HETATM 29 C C29 F3Q . . . B 2 10.435 42.771 -14.122 1 45.63 ? C29 F3Q 301 A 1 HETATM 30 C C30 F3Q . . . B 2 9.93 42.083 -15.211 1 45.07 ? C30 F3Q 301 A 1 HETATM 31 C C31 F3Q . . . B 2 8.603 41.718 -15.24 1 45.85 ? C31 F3Q 301 A 1 HETATM 32 C C32 F3Q . . . B 2 7.773 42.039 -14.18 1 45.57 ? C32 F3Q 301 A 1 HETATM 33 C C33 F3Q . . . B 2 8.637 45.794 -11.766 1 45.53 ? C33 F3Q 301 A 1 HETATM 34 C C34 F3Q . . . B 2 5.364 42.451 -9.252 1 41.28 ? C34 F3Q 301 A 1 HETATM 35 N N35 F3Q . . . B 2 7.48 46.524 -11.154 1 45.43 ? N35 F3Q 301 A 1 HETATM 36 C C36 F3Q . . . B 2 7.661 46.74 -9.689 1 47.63 ? C36 F3Q 301 A 1 HETATM 37 C C37 F3Q . . . B 2 6.477 47.494 -9.134 1 44.25 ? C37 F3Q 301 A 1 HETATM 38 O O38 F3Q . . . B 2 6.307 48.749 -9.788 1 49.11 ? O38 F3Q 301 A 1 HETATM 39 C C39 F3Q . . . B 2 6.09 48.55 -11.182 1 49.18 ? C39 F3Q 301 A 1 HETATM 40 C C40 F3Q . . . B 2 7.256 47.839 -11.826 1 47.37 ? C40 F3Q 301 A 1 HETATM 41 C C41 F3Q . . . B 2 10.863 38.757 -12.119 1 47.64 ? C41 F3Q 301 A 1 HETATM 42 C C42 F3Q . . . B 2 13.168 39.541 -12.455 1 48.68 ? C42 F3Q 301 A 1 HETATM 43 C C43 F3Q . . . B 2 10.192 39.29 -13.208 1 48.99 ? C43 F3Q 301 A 1 HETATM 44 C C44 F3Q . . . B 2 9.072 38.656 -13.719 1 47.92 ? C44 F3Q 301 A 1 HETATM 45 C C45 F3Q . . . B 2 8.618 37.48 -13.138 1 48.11 ? C45 F3Q 301 A 1 HETATM 46 C C46 F3Q . . . B 2 9.287 36.942 -12.047 1 47.21 ? C46 F3Q 301 A 1 HETATM 47 C C47 F3Q . . . B 2 10.407 37.581 -11.54 1 48.14 ? C47 F3Q 301 A 1 HETATM 48 C C48 F3Q . . . B 2 13.681 40.797 -12.761 1 49.61 ? C48 F3Q 301 A 1 HETATM 49 C C49 F3Q . . . B 2 14.807 40.902 -13.56 1 51.78 ? C49 F3Q 301 A 1 HETATM 50 C C50 F3Q . . . B 2 15.421 39.768 -14.055 1 53.87 ? C50 F3Q 301 A 1 HETATM 51 C C51 F3Q . . . B 2 14.909 38.521 -13.751 1 52.85 ? C51 F3Q 301 A 1 HETATM 52 C C52 F3Q . . . B 2 13.784 38.4 -12.953 1 49.76 ? C52 F3Q 301 A 1 HETATM 53 O O53 F3Q . . . B 2 7.509 36.864 -13.643 1 47.63 ? O53 F3Q 301 A 1 # _model_server_stats.io_time_ms 112 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #