data_8VZV # _model_server_result.job_id 1YANj7XdESFa6eJloj5iaw _model_server_result.datetime_utc '2024-11-29 21:37:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vzv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":403}' # _entry.id 8VZV # _exptl.entry_id 8VZV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.213 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-fluoro-3-[(E)-2-(1H-tetrazol-5-yl)ethenyl]-1H-indole _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8VZV _cell.length_a 143.428 _cell.length_b 152.919 _cell.length_c 87.588 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VZV _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 312 AAA HIS 328 1_555 E FE HEM . AAA HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc2 E FE HEM . AAA HEM 401 1_555 P O HOH . AAA HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc3 B NE2 HIS 312 BBB HIS 328 1_555 H FE HEM . BBB HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc4 H FE HEM . BBB HEM 401 1_555 Q O HOH . BBB HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc5 C NE2 HIS 312 CCC HIS 328 1_555 K FE HEM . CCC HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc6 K FE HEM . CCC HEM 401 1_555 R O HOH . CCC HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc7 D NE2 HIS 312 DDD HIS 328 1_555 M FE HEM . DDD HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc8 M FE HEM . DDD HEM 401 1_555 S O HOH . DDD HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? # _chem_comp.formula 'C11 H8 F N5' _chem_comp.formula_weight 229.213 _chem_comp.id A1AER _chem_comp.mon_nstd_flag . _chem_comp.name 6-fluoro-3-[(E)-2-(1H-tetrazol-5-yl)ethenyl]-1H-indole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 A1AER sing 1 n y C1 C6 A1AER doub 2 n y C1 C7 A1AER sing 3 n y C2 C3 A1AER doub 4 n y C3 C4 A1AER sing 5 n y C4 C5 A1AER doub 6 n y C4 F1 A1AER sing 7 n n C5 C6 A1AER sing 8 n y C6 N10 A1AER sing 9 n y C7 C11 A1AER doub 10 n y C7 C12 A1AER sing 11 n n N10 C11 A1AER sing 12 n y C12 C13 A1AER doub 13 e n C13 C15 A1AER sing 14 n n C15 N16 A1AER sing 15 n y C15 N19 A1AER doub 16 n y N16 N17 A1AER sing 17 n y N17 N18 A1AER doub 18 n y N18 N19 A1AER sing 19 n y C2 H2 A1AER sing 20 n n C3 H3 A1AER sing 21 n n C5 H5 A1AER sing 22 n n C11 H11 A1AER sing 23 n n C12 H12 A1AER sing 24 n n N10 HN10 A1AER sing 25 n n C13 H13 A1AER sing 26 n n N16 HN16 A1AER sing 27 n n # _atom_sites.entry_id 8VZV _atom_sites.fract_transf_matrix[1][1] 0.006972 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006539 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011417 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HEM AAA 1 401 401 HEM HEM . F 3 ZIQ AAA 1 402 403 ZIQ ZIQ . G 4 A1AER AAA 1 403 404 A1AER LM1 . H 2 HEM BBB 1 401 401 HEM HEM . I 3 ZIQ BBB 1 402 403 ZIQ ZIQ . J 4 A1AER BBB 1 403 404 A1AER LM1 . K 2 HEM CCC 1 401 401 HEM HEM . L 3 ZIQ CCC 1 402 403 ZIQ ZIQ . M 2 HEM DDD 1 401 401 HEM HEM . N 3 ZIQ DDD 1 402 403 ZIQ ZIQ . O 4 A1AER DDD 1 403 404 A1AER LM1 . P 5 HOH AAA 1 501 8 HOH HOH . P 5 HOH AAA 2 502 37 HOH HOH . P 5 HOH AAA 3 503 182 HOH HOH . P 5 HOH AAA 4 504 175 HOH HOH . P 5 HOH AAA 5 505 31 HOH HOH . P 5 HOH AAA 6 506 30 HOH HOH . P 5 HOH AAA 7 507 144 HOH HOH . P 5 HOH AAA 8 508 38 HOH HOH . P 5 HOH AAA 9 509 52 HOH HOH . P 5 HOH AAA 10 510 45 HOH HOH . P 5 HOH AAA 11 511 51 HOH HOH . P 5 HOH AAA 12 512 132 HOH HOH . P 5 HOH AAA 13 513 87 HOH HOH . P 5 HOH AAA 14 514 114 HOH HOH . P 5 HOH AAA 15 515 100 HOH HOH . P 5 HOH AAA 16 516 40 HOH HOH . P 5 HOH AAA 17 517 22 HOH HOH . P 5 HOH AAA 18 518 32 HOH HOH . P 5 HOH AAA 19 519 107 HOH HOH . P 5 HOH AAA 20 520 185 HOH HOH . P 5 HOH AAA 21 521 102 HOH HOH . P 5 HOH AAA 22 522 4 HOH HOH . P 5 HOH AAA 23 523 134 HOH HOH . P 5 HOH AAA 24 524 153 HOH HOH . P 5 HOH AAA 25 525 17 HOH HOH . P 5 HOH AAA 26 526 179 HOH HOH . P 5 HOH AAA 27 527 82 HOH HOH . P 5 HOH AAA 28 528 84 HOH HOH . P 5 HOH AAA 29 529 173 HOH HOH . P 5 HOH AAA 30 530 119 HOH HOH . P 5 HOH AAA 31 531 113 HOH HOH . P 5 HOH AAA 32 532 77 HOH HOH . P 5 HOH AAA 33 533 39 HOH HOH . P 5 HOH AAA 34 534 46 HOH HOH . P 5 HOH AAA 35 535 26 HOH HOH . P 5 HOH AAA 36 536 12 HOH HOH . P 5 HOH AAA 37 537 110 HOH HOH . P 5 HOH AAA 38 538 133 HOH HOH . P 5 HOH AAA 39 539 34 HOH HOH . P 5 HOH AAA 40 540 35 HOH HOH . P 5 HOH AAA 41 541 69 HOH HOH . P 5 HOH AAA 42 542 53 HOH HOH . P 5 HOH AAA 43 543 65 HOH HOH . Q 5 HOH BBB 1 501 1 HOH HOH . Q 5 HOH BBB 2 502 186 HOH HOH . Q 5 HOH BBB 3 503 177 HOH HOH . Q 5 HOH BBB 4 504 85 HOH HOH . Q 5 HOH BBB 5 505 150 HOH HOH . Q 5 HOH BBB 6 506 33 HOH HOH . Q 5 HOH BBB 7 507 62 HOH HOH . Q 5 HOH BBB 8 508 21 HOH HOH . Q 5 HOH BBB 9 509 161 HOH HOH . Q 5 HOH BBB 10 510 140 HOH HOH . Q 5 HOH BBB 11 511 174 HOH HOH . Q 5 HOH BBB 12 512 91 HOH HOH . Q 5 HOH BBB 13 513 101 HOH HOH . Q 5 HOH BBB 14 514 14 HOH HOH . Q 5 HOH BBB 15 515 149 HOH HOH . Q 5 HOH BBB 16 516 126 HOH HOH . Q 5 HOH BBB 17 517 98 HOH HOH . Q 5 HOH BBB 18 518 70 HOH HOH . Q 5 HOH BBB 19 519 15 HOH HOH . Q 5 HOH BBB 20 520 96 HOH HOH . Q 5 HOH BBB 21 521 137 HOH HOH . Q 5 HOH BBB 22 522 25 HOH HOH . Q 5 HOH BBB 23 523 61 HOH HOH . Q 5 HOH BBB 24 524 190 HOH HOH . Q 5 HOH BBB 25 525 108 HOH HOH . Q 5 HOH BBB 26 526 189 HOH HOH . Q 5 HOH BBB 27 527 118 HOH HOH . Q 5 HOH BBB 28 528 171 HOH HOH . Q 5 HOH BBB 29 529 23 HOH HOH . Q 5 HOH BBB 30 530 36 HOH HOH . Q 5 HOH BBB 31 531 90 HOH HOH . Q 5 HOH BBB 32 532 127 HOH HOH . Q 5 HOH BBB 33 533 97 HOH HOH . Q 5 HOH BBB 34 534 141 HOH HOH . Q 5 HOH BBB 35 535 130 HOH HOH . Q 5 HOH BBB 36 536 123 HOH HOH . Q 5 HOH BBB 37 537 83 HOH HOH . Q 5 HOH BBB 38 538 73 HOH HOH . Q 5 HOH BBB 39 539 79 HOH HOH . Q 5 HOH BBB 40 540 170 HOH HOH . Q 5 HOH BBB 41 541 111 HOH HOH . Q 5 HOH BBB 42 542 13 HOH HOH . Q 5 HOH BBB 43 543 81 HOH HOH . Q 5 HOH BBB 44 544 2 HOH HOH . Q 5 HOH BBB 45 545 103 HOH HOH . Q 5 HOH BBB 46 546 105 HOH HOH . Q 5 HOH BBB 47 547 121 HOH HOH . Q 5 HOH BBB 48 548 169 HOH HOH . Q 5 HOH BBB 49 549 166 HOH HOH . Q 5 HOH BBB 50 550 27 HOH HOH . Q 5 HOH BBB 51 551 167 HOH HOH . Q 5 HOH BBB 52 552 172 HOH HOH . Q 5 HOH BBB 53 553 187 HOH HOH . Q 5 HOH BBB 54 554 68 HOH HOH . Q 5 HOH BBB 55 555 64 HOH HOH . Q 5 HOH BBB 56 556 157 HOH HOH . Q 5 HOH BBB 57 557 63 HOH HOH . Q 5 HOH BBB 58 558 60 HOH HOH . Q 5 HOH BBB 59 559 176 HOH HOH . Q 5 HOH BBB 60 560 188 HOH HOH . R 5 HOH CCC 1 501 125 HOH HOH . R 5 HOH CCC 2 502 184 HOH HOH . R 5 HOH CCC 3 503 142 HOH HOH . R 5 HOH CCC 4 504 160 HOH HOH . R 5 HOH CCC 5 505 158 HOH HOH . R 5 HOH CCC 6 506 115 HOH HOH . R 5 HOH CCC 7 507 20 HOH HOH . R 5 HOH CCC 8 508 139 HOH HOH . R 5 HOH CCC 9 509 152 HOH HOH . R 5 HOH CCC 10 510 117 HOH HOH . R 5 HOH CCC 11 511 57 HOH HOH . R 5 HOH CCC 12 512 131 HOH HOH . R 5 HOH CCC 13 513 78 HOH HOH . R 5 HOH CCC 14 514 7 HOH HOH . R 5 HOH CCC 15 515 6 HOH HOH . R 5 HOH CCC 16 516 94 HOH HOH . R 5 HOH CCC 17 517 3 HOH HOH . R 5 HOH CCC 18 518 19 HOH HOH . R 5 HOH CCC 19 519 162 HOH HOH . R 5 HOH CCC 20 520 89 HOH HOH . R 5 HOH CCC 21 521 71 HOH HOH . R 5 HOH CCC 22 522 135 HOH HOH . R 5 HOH CCC 23 523 164 HOH HOH . R 5 HOH CCC 24 524 86 HOH HOH . R 5 HOH CCC 25 525 99 HOH HOH . R 5 HOH CCC 26 526 92 HOH HOH . R 5 HOH CCC 27 527 43 HOH HOH . R 5 HOH CCC 28 528 75 HOH HOH . R 5 HOH CCC 29 529 138 HOH HOH . R 5 HOH CCC 30 530 165 HOH HOH . R 5 HOH CCC 31 531 50 HOH HOH . R 5 HOH CCC 32 532 168 HOH HOH . R 5 HOH CCC 33 533 180 HOH HOH . R 5 HOH CCC 34 534 67 HOH HOH . R 5 HOH CCC 35 535 58 HOH HOH . R 5 HOH CCC 36 536 59 HOH HOH . R 5 HOH CCC 37 537 159 HOH HOH . R 5 HOH CCC 38 538 49 HOH HOH . R 5 HOH CCC 39 539 178 HOH HOH . S 5 HOH DDD 1 501 10 HOH HOH . S 5 HOH DDD 2 502 29 HOH HOH . S 5 HOH DDD 3 503 155 HOH HOH . S 5 HOH DDD 4 504 88 HOH HOH . S 5 HOH DDD 5 505 66 HOH HOH . S 5 HOH DDD 6 506 154 HOH HOH . S 5 HOH DDD 7 507 76 HOH HOH . S 5 HOH DDD 8 508 42 HOH HOH . S 5 HOH DDD 9 509 120 HOH HOH . S 5 HOH DDD 10 510 156 HOH HOH . S 5 HOH DDD 11 511 116 HOH HOH . S 5 HOH DDD 12 512 122 HOH HOH . S 5 HOH DDD 13 513 148 HOH HOH . S 5 HOH DDD 14 514 55 HOH HOH . S 5 HOH DDD 15 515 28 HOH HOH . S 5 HOH DDD 16 516 143 HOH HOH . S 5 HOH DDD 17 517 163 HOH HOH . S 5 HOH DDD 18 518 44 HOH HOH . S 5 HOH DDD 19 519 106 HOH HOH . S 5 HOH DDD 20 520 72 HOH HOH . S 5 HOH DDD 21 521 124 HOH HOH . S 5 HOH DDD 22 522 104 HOH HOH . S 5 HOH DDD 23 523 56 HOH HOH . S 5 HOH DDD 24 524 109 HOH HOH . S 5 HOH DDD 25 525 147 HOH HOH . S 5 HOH DDD 26 526 183 HOH HOH . S 5 HOH DDD 27 527 5 HOH HOH . S 5 HOH DDD 28 528 145 HOH HOH . S 5 HOH DDD 29 529 80 HOH HOH . S 5 HOH DDD 30 530 93 HOH HOH . S 5 HOH DDD 31 531 128 HOH HOH . S 5 HOH DDD 32 532 181 HOH HOH . S 5 HOH DDD 33 533 136 HOH HOH . S 5 HOH DDD 34 534 112 HOH HOH . S 5 HOH DDD 35 535 18 HOH HOH . S 5 HOH DDD 36 536 16 HOH HOH . S 5 HOH DDD 37 537 74 HOH HOH . S 5 HOH DDD 38 538 41 HOH HOH . S 5 HOH DDD 39 539 146 HOH HOH . S 5 HOH DDD 40 540 24 HOH HOH . S 5 HOH DDD 41 541 95 HOH HOH . S 5 HOH DDD 42 542 11 HOH HOH . S 5 HOH DDD 43 543 129 HOH HOH . S 5 HOH DDD 44 544 151 HOH HOH . S 5 HOH DDD 45 545 47 HOH HOH . S 5 HOH DDD 46 546 54 HOH HOH . S 5 HOH DDD 47 547 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 A1AER . . . J 4 15.163 17.855 -12.212 1 93.93 0 C1 A1AER 403 BBB 1 HETATM 2 C C2 A1AER . . . J 4 15.739 16.972 -13.119 1 82.06 0 C2 A1AER 403 BBB 1 HETATM 3 C C3 A1AER . . . J 4 16.661 16.069 -12.621 1 80.5 0 C3 A1AER 403 BBB 1 HETATM 4 C C4 A1AER . . . J 4 16.947 16.084 -11.261 1 79.45 0 C4 A1AER 403 BBB 1 HETATM 5 C C5 A1AER . . . J 4 16.4 16.959 -10.327 1 86.92 0 C5 A1AER 403 BBB 1 HETATM 6 C C6 A1AER . . . J 4 15.466 17.893 -10.753 1 98.01 0 C6 A1AER 403 BBB 1 HETATM 7 C C7 A1AER . . . J 4 14.2 18.945 -12.321 1 94.35 0 C7 A1AER 403 BBB 1 HETATM 8 C C11 A1AER . . . J 4 13.934 19.511 -11.081 1 93.14 0 C11 A1AER 403 BBB 1 HETATM 9 C C12 A1AER . . . J 4 13.555 19.25 -13.59 1 80.79 0 C12 A1AER 403 BBB 1 HETATM 10 F F1 A1AER . . . J 4 17.815 15.211 -10.817 1 89.1 0 F1 A1AER 403 BBB 1 HETATM 11 N N10 A1AER . . . J 4 14.72 18.881 -10.153 1 90.54 0 N10 A1AER 403 BBB 1 HETATM 12 C C13 A1AER . . . J 4 12.521 20.038 -13.548 1 86.09 0 C13 A1AER 403 BBB 1 HETATM 13 C C15 A1AER . . . J 4 11.961 20.291 -14.832 1 104.37 0 C15 A1AER 403 BBB 1 HETATM 14 N N16 A1AER . . . J 4 11.28 21.367 -15.096 1 114.3 0 N16 A1AER 403 BBB 1 HETATM 15 N N17 A1AER . . . J 4 10.958 21.333 -16.452 1 123.72 0 N17 A1AER 403 BBB 1 HETATM 16 N N18 A1AER . . . J 4 11.562 20.149 -16.932 1 124.06 0 N18 A1AER 403 BBB 1 HETATM 17 N N19 A1AER . . . J 4 12.216 19.495 -15.867 1 118.55 0 N19 A1AER 403 BBB 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #