data_8W1V # _model_server_result.job_id kR7GdTTxCViFhqsFDljVdA _model_server_result.datetime_utc '2024-11-08 12:32:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8w1v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1201}' # _entry.id 8W1V # _exptl.entry_id 8W1V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 581.789 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-1-[(3-{1-[4-(4-{(2S)-2-hydroxy-3-[(propan-2-yl)amino]propoxy}phenyl)butyl]-1H-1,2,3-triazol-4-yl}propyl)amino]-3-(2-propylphenoxy)propan-2-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.06 _cell.angle_gamma 90 _cell.entry_id 8W1V _cell.length_a 73.68 _cell.length_b 146.77 _cell.length_c 91.83 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8W1V _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 130 A CYS 106 1_555 A SG CYS 215 A CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 208 A CYS 184 1_555 A SG CYS 214 A CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 B SG CYS 130 B CYS 106 1_555 B SG CYS 215 B CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf4 B SG CYS 208 B CYS 184 1_555 B SG CYS 214 B CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 C SG CYS 22 D CYS 22 1_555 C SG CYS 95 D CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 D SG CYS 22 F CYS 22 1_555 D SG CYS 95 F CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C33 H51 N5 O4' _chem_comp.formula_weight 581.789 _chem_comp.id A1AE2 _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-1-[(3-{1-[4-(4-{(2S)-2-hydroxy-3-[(propan-2-yl)amino]propoxy}phenyl)butyl]-1H-1,2,3-triazol-4-yl}propyl)amino]-3-(2-propylphenoxy)propan-2-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 A1AE2 doub 1 n y C1 C6 A1AE2 sing 2 n y C1 O1 A1AE2 sing 3 n n C2 C3 A1AE2 sing 4 n y C3 C4 A1AE2 doub 5 n y C4 C5 A1AE2 sing 6 n y C5 C6 A1AE2 doub 7 n y C6 C7 A1AE2 sing 8 n n C7 C8 A1AE2 sing 9 n n C8 C9 A1AE2 sing 10 n n O1 C10 A1AE2 sing 11 n n C10 C11 A1AE2 sing 12 n n C11 C12 A1AE2 sing 13 n n C11 O2 A1AE2 sing 14 n n C12 N1 A1AE2 sing 15 n n N1 C13 A1AE2 sing 16 n n C13 C14 A1AE2 sing 17 n n C14 C15 A1AE2 sing 18 n n C15 C16 A1AE2 sing 19 n n C16 N2 A1AE2 sing 20 n y C16 C17 A1AE2 doub 21 n y N2 N3 A1AE2 doub 22 n y N3 N4 A1AE2 sing 23 n y N4 C17 A1AE2 sing 24 n y N4 C18 A1AE2 sing 25 n n C18 C19 A1AE2 sing 26 n n C19 C20 A1AE2 sing 27 n n C20 C21 A1AE2 sing 28 n n C21 C22 A1AE2 sing 29 n n C22 C23 A1AE2 doub 30 n y C22 C27 A1AE2 sing 31 n y C23 C24 A1AE2 sing 32 n y C24 C25 A1AE2 doub 33 n y C25 C26 A1AE2 sing 34 n y C25 O3 A1AE2 sing 35 n n C26 C27 A1AE2 doub 36 n y O3 C28 A1AE2 sing 37 n n C28 C29 A1AE2 sing 38 n n C29 C30 A1AE2 sing 39 n n C29 O4 A1AE2 sing 40 n n C30 N5 A1AE2 sing 41 n n N5 C31 A1AE2 sing 42 n n C31 C32 A1AE2 sing 43 n n C31 C33 A1AE2 sing 44 n n C4 H3 A1AE2 sing 45 n n C14 H19 A1AE2 sing 46 n n C14 H20 A1AE2 sing 47 n n C5 H4 A1AE2 sing 48 n n C11 H12 A1AE2 sing 49 n n C7 H6 A1AE2 sing 50 n n C7 H5 A1AE2 sing 51 n n C8 H7 A1AE2 sing 52 n n C8 H50 A1AE2 sing 53 n n C9 H9 A1AE2 sing 54 n n C9 H8 A1AE2 sing 55 n n C9 H51 A1AE2 sing 56 n n C10 H11 A1AE2 sing 57 n n C10 H10 A1AE2 sing 58 n n C12 H14 A1AE2 sing 59 n n C12 H13 A1AE2 sing 60 n n C13 H17 A1AE2 sing 61 n n C13 H18 A1AE2 sing 62 n n N1 H16 A1AE2 sing 63 n n C3 H2 A1AE2 sing 64 n n C15 H21 A1AE2 sing 65 n n C15 H22 A1AE2 sing 66 n n C17 H23 A1AE2 sing 67 n n C18 H24 A1AE2 sing 68 n n C18 H25 A1AE2 sing 69 n n C19 H27 A1AE2 sing 70 n n C19 H26 A1AE2 sing 71 n n C2 H1 A1AE2 sing 72 n n C20 H28 A1AE2 sing 73 n n C20 H29 A1AE2 sing 74 n n C21 H31 A1AE2 sing 75 n n C21 H30 A1AE2 sing 76 n n C23 H32 A1AE2 sing 77 n n C24 H33 A1AE2 sing 78 n n C26 H34 A1AE2 sing 79 n n C27 H35 A1AE2 sing 80 n n C28 H36 A1AE2 sing 81 n n C28 H37 A1AE2 sing 82 n n C29 H38 A1AE2 sing 83 n n C30 H39 A1AE2 sing 84 n n C30 H40 A1AE2 sing 85 n n C31 H43 A1AE2 sing 86 n n C32 H44 A1AE2 sing 87 n n C32 H45 A1AE2 sing 88 n n C32 H46 A1AE2 sing 89 n n C33 H47 A1AE2 sing 90 n n C33 H49 A1AE2 sing 91 n n C33 H48 A1AE2 sing 92 n n N5 H53 A1AE2 sing 93 n n O2 H15 A1AE2 sing 94 n n O4 H41 A1AE2 sing 95 n n # _atom_sites.entry_id 8W1V _atom_sites.fract_transf_matrix[1][1] 0.013572 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004165 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006813 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011391 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 A1AE2 A 1 1201 1 A1AE2 DRG . F 3 A1AE2 B 1 1201 2 A1AE2 DRG . G 4 AV0 B 1 1202 1 AV0 LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 A1AE2 . . . F 3 -23.001 39.538 -6.999 1 45.71 ? C4 A1AE2 1201 B 1 HETATM 2 C C14 A1AE2 . . . F 3 -16.454 40.75 -13.535 1 58.43 ? C14 A1AE2 1201 B 1 HETATM 3 C C5 A1AE2 . . . F 3 -23.1 40.053 -8.203 1 48.9 ? C5 A1AE2 1201 B 1 HETATM 4 C C6 A1AE2 . . . F 3 -21.881 40.701 -8.854 1 52.18 ? C6 A1AE2 1201 B 1 HETATM 5 C C11 A1AE2 . . . F 3 -17.347 41.808 -9.129 1 61.51 ? C11 A1AE2 1201 B 1 HETATM 6 C C7 A1AE2 . . . F 3 -21.991 41.3 -10.25 1 42.44 ? C7 A1AE2 1201 B 1 HETATM 7 C C8 A1AE2 . . . F 3 -23.463 41.534 -10.557 1 47.22 ? C8 A1AE2 1201 B 1 HETATM 8 C C9 A1AE2 . . . F 3 -23.652 42.328 -11.84 1 52.94 ? C9 A1AE2 1201 B 1 HETATM 9 C C10 A1AE2 . . . F 3 -18.378 41.007 -8.339 1 53.52 ? C10 A1AE2 1201 B 1 HETATM 10 C C12 A1AE2 . . . F 3 -17.334 41.247 -10.55 1 56.07 ? C12 A1AE2 1201 B 1 HETATM 11 C C13 A1AE2 . . . F 3 -16.561 41.989 -12.651 1 61.08 ? C13 A1AE2 1201 B 1 HETATM 12 N N1 A1AE2 . . . F 3 -16.165 41.684 -11.285 1 51.99 ? N1 A1AE2 1201 B 1 HETATM 13 N N2 A1AE2 . . . F 3 -14.378 40.665 -16.343 1 75.95 ? N2 A1AE2 1201 B 1 HETATM 14 C C3 A1AE2 . . . F 3 -21.667 39.596 -6.26 1 55.54 ? C3 A1AE2 1201 B 1 HETATM 15 N N3 A1AE2 . . . F 3 -13.932 41.667 -17.211 1 80.61 ? N3 A1AE2 1201 B 1 HETATM 16 C C1 A1AE2 . . . F 3 -20.731 40.749 -8.218 1 54.85 ? C1 A1AE2 1201 B 1 HETATM 17 C C15 A1AE2 . . . F 3 -14.986 40.461 -13.836 1 57.03 ? C15 A1AE2 1201 B 1 HETATM 18 C C16 A1AE2 . . . F 3 -14.524 41.216 -15.083 1 67.12 ? C16 A1AE2 1201 B 1 HETATM 19 C C17 A1AE2 . . . F 3 -14.168 42.558 -15.162 1 66.11 ? C17 A1AE2 1201 B 1 HETATM 20 C C18 A1AE2 . . . F 3 -13.364 44.1 -17.011 1 72.51 ? C18 A1AE2 1201 B 1 HETATM 21 C C19 A1AE2 . . . F 3 -13.945 44.313 -18.408 1 72.62 ? C19 A1AE2 1201 B 1 HETATM 22 C C2 A1AE2 . . . F 3 -20.615 40.155 -6.819 1 59.18 ? C2 A1AE2 1201 B 1 HETATM 23 C C20 A1AE2 . . . F 3 -15.259 45.08 -18.281 1 78.89 ? C20 A1AE2 1201 B 1 HETATM 24 C C21 A1AE2 . . . F 3 -15.766 45.522 -19.651 1 77.88 ? C21 A1AE2 1201 B 1 HETATM 25 C C22 A1AE2 . . . F 3 -17.25 45.175 -19.761 1 86.27 ? C22 A1AE2 1201 B 1 HETATM 26 C C23 A1AE2 . . . F 3 -18.196 46.175 -19.924 1 84.69 ? C23 A1AE2 1201 B 1 HETATM 27 C C24 A1AE2 . . . F 3 -19.547 45.851 -20.025 1 89.1 ? C24 A1AE2 1201 B 1 HETATM 28 C C25 A1AE2 . . . F 3 -19.947 44.519 -19.956 1 82.29 ? C25 A1AE2 1201 B 1 HETATM 29 C C26 A1AE2 . . . F 3 -18.996 43.525 -19.786 1 80.51 ? C26 A1AE2 1201 B 1 HETATM 30 C C27 A1AE2 . . . F 3 -17.66 43.859 -19.689 1 88.13 ? C27 A1AE2 1201 B 1 HETATM 31 C C28 A1AE2 . . . F 3 -22.102 44.88 -19.139 1 73.36 ? C28 A1AE2 1201 B 1 HETATM 32 C C29 A1AE2 . . . F 3 -23.224 43.957 -18.686 1 74.32 ? C29 A1AE2 1201 B 1 HETATM 33 C C30 A1AE2 . . . F 3 -22.955 43.545 -17.24 1 77.13 ? C30 A1AE2 1201 B 1 HETATM 34 C C31 A1AE2 . . . F 3 -23.314 44.708 -15.198 1 78.91 ? C31 A1AE2 1201 B 1 HETATM 35 C C32 A1AE2 . . . F 3 -24.361 44.635 -14.096 1 69.3 ? C32 A1AE2 1201 B 1 HETATM 36 C C33 A1AE2 . . . F 3 -22.942 46.171 -15.429 1 85.64 ? C33 A1AE2 1201 B 1 HETATM 37 N N4 A1AE2 . . . F 3 -13.804 42.822 -16.483 1 77.1 ? N4 A1AE2 1201 B 1 HETATM 38 N N5 A1AE2 . . . F 3 -23.94 44.196 -16.399 1 79.51 ? N5 A1AE2 1201 B 1 HETATM 39 O O1 A1AE2 . . . F 3 -19.635 41.355 -8.839 1 53.07 ? O1 A1AE2 1201 B 1 HETATM 40 O O2 A1AE2 . . . F 3 -16.087 41.708 -8.526 1 53.77 ? O2 A1AE2 1201 B 1 HETATM 41 O O3 A1AE2 . . . F 3 -21.303 44.188 -20.052 1 71.7 ? O3 A1AE2 1201 B 1 HETATM 42 O O4 A1AE2 . . . F 3 -23.259 42.829 -19.518 1 60.66 ? O4 A1AE2 1201 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 42 #