data_8W2H
#
_model_server_result.job_id            PnydOGuz2XORMOX-dAZEqA 
_model_server_result.datetime_utc      '2024-10-12 07:24:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8w2h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":804}' 
#
_entry.id    8W2H 
#
_exptl.entry_id    8W2H 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8W2H 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8W2H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 119 A ASP 119 1_555 I MG MG . A MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc2 G O2G ATP . A ATP 803 1_555 I MG MG . A MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
metalc ? metalc3 G O2B ATP . A ATP 803 1_555 I MG MG . A MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? 
metalc ? metalc4 B OD1 ASP 119 B ASP 119 1_555 N MG MG . B MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
metalc ? metalc5 L O2G ATP . B ATP 803 1_555 N MG MG . B MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc6 L O2B ATP . B ATP 803 1_555 N MG MG . B MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? 
metalc ? metalc7 C OD1 ASP 119 C ASP 119 1_555 S MG MG . C MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
metalc ? metalc8 Q O2G ATP . C ATP 803 1_555 S MG MG . C MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc9 Q O2B ATP . C ATP 803 1_555 S MG MG . C MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? 
metalc ? metalc10 D OD1 ASP 119 D ASP 119 1_555 X MG MG . D MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
metalc ? metalc11 V O2G ATP . D ATP 803 1_555 X MG MG . D MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc12 V O2B ATP . D ATP 803 1_555 X MG MG . D MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     8W2H 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FBP A 1 801 802 FBP FBP . 
F 3 ATP A 1 802 602 ATP ATP . 
G 3 ATP A 1 803 763 ATP ATP . 
H 3 ATP A 1 804 765 ATP ATP . 
I 4 MG A 1 805 1 MG MG . 
J 2 FBP B 1 801 802 FBP FBP . 
K 3 ATP B 1 802 602 ATP ATP . 
L 3 ATP B 1 803 763 ATP ATP . 
M 3 ATP B 1 804 765 ATP ATP . 
N 4 MG B 1 805 1 MG MG . 
O 2 FBP C 1 801 802 FBP FBP . 
P 3 ATP C 1 802 602 ATP ATP . 
Q 3 ATP C 1 803 763 ATP ATP . 
R 3 ATP C 1 804 765 ATP ATP . 
S 4 MG C 1 805 1 MG MG . 
T 2 FBP D 1 801 802 FBP FBP . 
U 3 ATP D 1 802 602 ATP ATP . 
V 3 ATP D 1 803 763 ATP ATP . 
W 3 ATP D 1 804 765 ATP ATP . 
X 4 MG D 1 805 1 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . R 3 265.464 240.494 209.052 1 36.8 ? PG ATP 804 C 1 
HETATM 2 O O1G ATP . . . R 3 264.661 241.595 209.58 1 36.8 ? O1G ATP 804 C 1 
HETATM 3 O O2G ATP . . . R 3 264.521 239.385 208.939 1 36.8 ? O2G ATP 804 C 1 
HETATM 4 O O3G ATP . . . R 3 265.738 240.877 207.67 1 36.8 ? O3G ATP 804 C 1 
HETATM 5 P PB ATP . . . R 3 267.44 241.115 211.107 1 36.8 ? PB ATP 804 C 1 
HETATM 6 O O1B ATP . . . R 3 268.626 241.821 210.632 1 36.8 ? O1B ATP 804 C 1 
HETATM 7 O O2B ATP . . . R 3 266.552 242.231 211.416 1 36.8 ? O2B ATP 804 C 1 
HETATM 8 O O3B ATP . . . R 3 266.812 240.142 209.933 1 36.8 ? O3B ATP 804 C 1 
HETATM 9 P PA ATP . . . R 3 266.832 238.969 212.956 1 36.8 ? PA ATP 804 C 1 
HETATM 10 O O1A ATP . . . R 3 266.533 239.064 214.382 1 36.8 ? O1A ATP 804 C 1 
HETATM 11 O O2A ATP . . . R 3 265.499 239.051 212.37 1 36.8 ? O2A ATP 804 C 1 
HETATM 12 O O3A ATP . . . R 3 267.767 240.232 212.459 1 36.8 ? O3A ATP 804 C 1 
HETATM 13 O O5' ATP . . . R 3 267.502 237.511 212.574 1 36.8 ? O5' ATP 804 C 1 
HETATM 14 C C5' ATP . . . R 3 268.798 237.431 212.051 1 36.8 ? C5' ATP 804 C 1 
HETATM 15 C C4' ATP . . . R 3 268.866 236.252 211.145 1 36.8 ? C4' ATP 804 C 1 
HETATM 16 O O4' ATP . . . R 3 268.161 235.096 211.778 1 36.8 ? O4' ATP 804 C 1 
HETATM 17 C C3' ATP . . . R 3 268.189 236.55 209.853 1 36.8 ? C3' ATP 804 C 1 
HETATM 18 O O3' ATP . . . R 3 269.049 236.154 208.755 1 36.8 ? O3' ATP 804 C 1 
HETATM 19 C C2' ATP . . . R 3 266.958 235.77 209.816 1 36.8 ? C2' ATP 804 C 1 
HETATM 20 O O2' ATP . . . R 3 266.723 235.269 208.476 1 36.8 ? O2' ATP 804 C 1 
HETATM 21 C C1' ATP . . . R 3 267.17 234.638 210.751 1 36.8 ? C1' ATP 804 C 1 
HETATM 22 N N9 ATP . . . R 3 265.969 234.244 211.386 1 36.8 ? N9 ATP 804 C 1 
HETATM 23 C C8 ATP . . . R 3 265.311 235.024 212.316 1 36.8 ? C8 ATP 804 C 1 
HETATM 24 N N7 ATP . . . R 3 264.272 234.238 212.613 1 36.8 ? N7 ATP 804 C 1 
HETATM 25 C C5 ATP . . . R 3 264.191 233.003 211.977 1 36.8 ? C5 ATP 804 C 1 
HETATM 26 C C6 ATP . . . R 3 263.432 231.84 211.867 1 36.8 ? C6 ATP 804 C 1 
HETATM 27 N N6 ATP . . . R 3 262.219 231.643 212.64 1 36.8 ? N6 ATP 804 C 1 
HETATM 28 N N1 ATP . . . R 3 263.864 230.933 211.039 1 36.8 ? N1 ATP 804 C 1 
HETATM 29 C C2 ATP . . . R 3 264.934 231.025 210.314 1 36.8 ? C2 ATP 804 C 1 
HETATM 30 N N3 ATP . . . R 3 265.751 232.046 210.302 1 36.8 ? N3 ATP 804 C 1 
HETATM 31 C C4 ATP . . . R 3 265.364 233.016 211.133 1 36.8 ? C4 ATP 804 C 1 
HETATM 32 H "H5'1" ATP . . . R 3 269.508 237.321 212.862 1 36.8 ? "H5'1" ATP 804 C 1 
HETATM 33 H "H5'2" ATP . . . R 3 269.038 238.326 211.49 1 36.8 ? "H5'2" ATP 804 C 1 
HETATM 34 H H4' ATP . . . R 3 269.901 235.987 210.963 1 36.8 ? H4' ATP 804 C 1 
HETATM 35 H H3' ATP . . . R 3 267.95 237.603 209.778 1 36.8 ? H3' ATP 804 C 1 
HETATM 36 H HO3' ATP . . . R 3 268.519 235.897 208.018 1 36.8 ? HO3' ATP 804 C 1 
HETATM 37 H H2' ATP . . . R 3 266.126 236.383 210.139 1 36.8 ? H2' ATP 804 C 1 
HETATM 38 H HO2' ATP . . . R 3 266.265 234.445 208.526 1 36.8 ? HO2' ATP 804 C 1 
HETATM 39 H H1' ATP . . . R 3 267.586 233.8 210.206 1 36.8 ? H1' ATP 804 C 1 
HETATM 40 H H8 ATP . . . R 3 265.56 236.009 212.692 1 36.8 ? H8 ATP 804 C 1 
HETATM 41 H HN61 ATP . . . R 3 261.862 230.716 212.781 1 36.8 ? HN61 ATP 804 C 1 
HETATM 42 H HN62 ATP . . . R 3 261.742 232.43 213.037 1 36.8 ? HN62 ATP 804 C 1 
HETATM 43 H H2 ATP . . . R 3 265.171 230.198 209.669 1 36.8 ? H2 ATP 804 C 1 
#
_model_server_stats.io_time_ms              90 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    68 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           43 
#