data_8W2K # _model_server_result.job_id -PLRqV88OPdrr1zfYGitdQ _model_server_result.datetime_utc '2024-11-15 03:27:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8w2k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":403}' # _entry.id 8W2K # _exptl.entry_id 8W2K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 364.419 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (6M)-6-(6-fluoro-1H-indol-3-yl)-1-[2-(piperazin-1-yl)ethyl]-1H-benzotriazole _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8W2K _cell.length_a 144.081 _cell.length_b 154.84 _cell.length_c 88.757 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8W2K _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N ? 4 M N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 312 A HIS 328 1_555 E FE HEM . A HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc2 B NE2 HIS 312 B HIS 328 1_555 H FE HEM . B HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc3 C NE2 HIS 312 C HIS 328 1_555 K FE HEM . C HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc4 D NE2 HIS 312 D HIS 328 1_555 N FE HEM . D HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? # _chem_comp.formula 'C20 H21 F N6' _chem_comp.formula_weight 364.419 _chem_comp.id A1AE7 _chem_comp.mon_nstd_flag . _chem_comp.name (6M)-6-(6-fluoro-1H-indol-3-yl)-1-[2-(piperazin-1-yl)ethyl]-1H-benzotriazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 C1 A1AE7 sing 1 n n C1 C20 A1AE7 doub 2 n y C1 C2 A1AE7 sing 3 n y C20 C19 A1AE7 sing 4 n y C2 C3 A1AE7 doub 5 n y C19 N6 A1AE7 sing 6 n y C19 C4 A1AE7 doub 7 n y N6 C18 A1AE7 sing 8 n y C3 C4 A1AE7 sing 9 n y C4 C5 A1AE7 sing 10 n y C18 C5 A1AE7 doub 11 n y C5 C6 A1AE7 sing 12 n n C12 C13 A1AE7 sing 13 n n C12 N4 A1AE7 sing 14 n n C13 N5 A1AE7 sing 15 n n C6 C17 A1AE7 doub 16 n y C6 C7 A1AE7 sing 17 n y C17 C16 A1AE7 sing 18 n y C11 N4 A1AE7 sing 19 n n C11 C10 A1AE7 sing 20 n n N4 C15 A1AE7 sing 21 n n C7 C8 A1AE7 doub 22 n y N5 C14 A1AE7 sing 23 n n C10 N3 A1AE7 sing 24 n n C16 N3 A1AE7 sing 25 n y C16 C9 A1AE7 doub 26 n y N3 N2 A1AE7 sing 27 n y C15 C14 A1AE7 sing 28 n n C8 C9 A1AE7 sing 29 n y C9 N1 A1AE7 sing 30 n y N2 N1 A1AE7 doub 31 n y C12 H1 A1AE7 sing 32 n n C12 H2 A1AE7 sing 33 n n C11 H3 A1AE7 sing 34 n n C11 H4 A1AE7 sing 35 n n C10 H5 A1AE7 sing 36 n n C10 H6 A1AE7 sing 37 n n C13 H7 A1AE7 sing 38 n n C13 H8 A1AE7 sing 39 n n C14 H9 A1AE7 sing 40 n n C14 H10 A1AE7 sing 41 n n C7 H11 A1AE7 sing 42 n n C3 H13 A1AE7 sing 43 n n C2 H14 A1AE7 sing 44 n n C8 H15 A1AE7 sing 45 n n N5 H16 A1AE7 sing 46 n n C15 H18 A1AE7 sing 47 n n C15 H19 A1AE7 sing 48 n n C17 H20 A1AE7 sing 49 n n C18 H21 A1AE7 sing 50 n n N6 H22 A1AE7 sing 51 n n C20 H23 A1AE7 sing 52 n n # _atom_sites.entry_id 8W2K _atom_sites.fract_transf_matrix[1][1] 0.006941 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006458 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011267 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HEM A 1 401 401 HEM HEM . F 3 ZIQ A 1 402 402 ZIQ ZIQ . G 4 A1AE7 A 1 403 403 A1AE7 22F . H 2 HEM B 1 401 401 HEM HEM . I 3 ZIQ B 1 402 402 ZIQ ZIQ . J 4 A1AE7 B 1 403 403 A1AE7 22F . K 2 HEM C 1 401 401 HEM HEM . L 3 ZIQ C 1 402 402 ZIQ ZIQ . M 4 A1AE7 C 1 403 403 A1AE7 22F . N 2 HEM D 1 401 401 HEM HEM . O 3 ZIQ D 1 402 402 ZIQ ZIQ . P 4 A1AE7 D 1 403 403 A1AE7 22F . Q 5 HOH A 1 501 1 HOH HOH . Q 5 HOH A 2 502 8 HOH HOH . Q 5 HOH A 3 503 7 HOH HOH . Q 5 HOH A 4 504 11 HOH HOH . R 5 HOH B 1 501 3 HOH HOH . R 5 HOH B 2 502 9 HOH HOH . R 5 HOH B 3 503 12 HOH HOH . R 5 HOH B 4 504 10 HOH HOH . S 5 HOH C 1 501 4 HOH HOH . T 5 HOH D 1 501 5 HOH HOH . T 5 HOH D 2 502 2 HOH HOH . T 5 HOH D 3 503 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 A1AE7 . . . J 4 10.012 -61.522 -61.865 1 184.25 ? C12 A1AE7 403 B 1 HETATM 2 C C11 A1AE7 . . . J 4 11.95 -60.172 -61.376 1 190.26 ? C11 A1AE7 403 B 1 HETATM 3 C C10 A1AE7 . . . J 4 12.849 -59.058 -61.923 1 170.77 ? C10 A1AE7 403 B 1 HETATM 4 C C13 A1AE7 . . . J 4 9.846 -61.942 -60.414 1 174.03 ? C13 A1AE7 403 B 1 HETATM 5 C C14 A1AE7 . . . J 4 8.647 -59.825 -60.499 1 179.82 ? C14 A1AE7 403 B 1 HETATM 6 C C9 A1AE7 . . . J 4 12.474 -56.17 -59.82 1 117.53 ? C9 A1AE7 403 B 1 HETATM 7 C C7 A1AE7 . . . J 4 13.247 -56.146 -57.573 1 114.74 ? C7 A1AE7 403 B 1 HETATM 8 C C1 A1AE7 . . . J 4 17.438 -60.794 -55.82 1 109.32 ? C1 A1AE7 403 B 1 HETATM 9 C C6 A1AE7 . . . J 4 13.709 -57.468 -57.672 1 95.55 ? C6 A1AE7 403 B 1 HETATM 10 C C5 A1AE7 . . . J 4 14.418 -58.051 -56.517 1 91.33 ? C5 A1AE7 403 B 1 HETATM 11 N N4 A1AE7 . . . J 4 10.611 -60.178 -61.965 1 192.98 ? N4 A1AE7 403 B 1 HETATM 12 C C3 A1AE7 . . . J 4 16.109 -59.773 -57.509 1 104.01 ? C3 A1AE7 403 B 1 HETATM 13 C C2 A1AE7 . . . J 4 17.085 -60.674 -57.153 1 112.43 ? C2 A1AE7 403 B 1 HETATM 14 F F1 A1AE7 . . . J 4 18.419 -61.682 -55.512 1 144.1 ? F1 A1AE7 403 B 1 HETATM 15 C C4 A1AE7 . . . J 4 15.477 -59.029 -56.512 1 93.7 ? C4 A1AE7 403 B 1 HETATM 16 C C8 A1AE7 . . . J 4 12.631 -55.49 -58.612 1 124.29 ? C8 A1AE7 403 B 1 HETATM 17 N N1 A1AE7 . . . J 4 11.903 -55.787 -61.008 1 124.57 ? N1 A1AE7 403 B 1 HETATM 18 N N2 A1AE7 . . . J 4 12.012 -56.78 -61.839 1 144.49 ? N2 A1AE7 403 B 1 HETATM 19 N N3 A1AE7 . . . J 4 12.635 -57.809 -61.215 1 145.72 ? N3 A1AE7 403 B 1 HETATM 20 N N5 A1AE7 . . . J 4 9.207 -60.879 -59.628 1 172.27 ? N5 A1AE7 403 B 1 HETATM 21 C C15 A1AE7 . . . J 4 9.699 -59.176 -61.381 1 185.19 ? C15 A1AE7 403 B 1 HETATM 22 C C16 A1AE7 . . . J 4 12.947 -57.469 -59.933 1 115.24 ? C16 A1AE7 403 B 1 HETATM 23 C C17 A1AE7 . . . J 4 13.578 -58.109 -58.868 1 102.21 ? C17 A1AE7 403 B 1 HETATM 24 C C18 A1AE7 . . . J 4 14.264 -57.682 -55.198 1 89.15 ? C18 A1AE7 403 B 1 HETATM 25 N N6 A1AE7 . . . J 4 15.115 -58.376 -54.391 1 85.4 ? N6 A1AE7 403 B 1 HETATM 26 C C19 A1AE7 . . . J 4 15.874 -59.207 -55.168 1 93.08 ? C19 A1AE7 403 B 1 HETATM 27 C C20 A1AE7 . . . J 4 16.861 -60.11 -54.806 1 97.56 ? C20 A1AE7 403 B 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 27 #