data_8W3I
#
_model_server_result.job_id            CgAJTwkwpqflWC0B7Ty9jQ 
_model_server_result.datetime_utc      '2025-08-21 03:01:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8w3i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":602}' 
#
_entry.id    8W3I 
#
_exptl.entry_id    8W3I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8W3I 
_cell.length_a            168.999 
_cell.length_b            168.999 
_cell.length_c            168.999 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8W3I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        213 
_symmetry.space_group_name_Hall    'P 4bd 2ab 3' 
_symmetry.space_group_name_H-M     'P 41 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 
3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 41 F CYS 37 1_555 A SG CYS 404 F CYS 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf2 A SG CYS 73 F CYS 69 1_555 A SG CYS 177 F CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf3 A SG CYS 120 F CYS 155 1_555 A SG CYS 255 F CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
disulf ? disulf4 A SG CYS 278 F CYS 313 1_555 A SG CYS 308 F CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf5 A SG CYS 287 F CYS 322 1_555 A SG CYS 298 F CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf6 A SG CYS 323 F CYS 358 1_555 A SG CYS 332 F CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
disulf ? disulf7 A SG CYS 347 F CYS 382 1_555 A SG CYS 358 F CYS 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
disulf ? disulf8 A SG CYS 381 F CYS 416 1_555 A SG CYS 387 F CYS 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
covale ? covale1 A ND2 ASN 465 F ASN 500 1_555 B C1 NAG . F NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 267 n n 
C1 C2 PEG sing 268 n n 
C1 H11 PEG sing 269 n n 
C1 H12 PEG sing 270 n n 
O1 HO1 PEG sing 271 n n 
C2 O2 PEG sing 272 n n 
C2 H21 PEG sing 273 n n 
C2 H22 PEG sing 274 n n 
O2 C3 PEG sing 275 n n 
C3 C4 PEG sing 276 n n 
C3 H31 PEG sing 277 n n 
C3 H32 PEG sing 278 n n 
C4 O4 PEG sing 279 n n 
C4 H41 PEG sing 280 n n 
C4 H42 PEG sing 281 n n 
O4 HO4 PEG sing 282 n n 
#
_atom_sites.entry_id                     8W3I 
_atom_sites.fract_transf_matrix[1][1]    0.005917 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005917 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005917 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG F 1 601 510 NAG NAG . 
C 3 PEG F 1 602 511 PEG PEG . 
D 4 HOH F 1 701 65 HOH HOH . 
D 4 HOH F 2 702 48 HOH HOH . 
D 4 HOH F 3 703 67 HOH HOH . 
D 4 HOH F 4 704 34 HOH HOH . 
D 4 HOH F 5 705 69 HOH HOH . 
D 4 HOH F 6 706 80 HOH HOH . 
D 4 HOH F 7 707 42 HOH HOH . 
D 4 HOH F 8 708 6 HOH HOH . 
D 4 HOH F 9 709 20 HOH HOH . 
D 4 HOH F 10 710 16 HOH HOH . 
D 4 HOH F 11 711 28 HOH HOH . 
D 4 HOH F 12 712 49 HOH HOH . 
D 4 HOH F 13 713 11 HOH HOH . 
D 4 HOH F 14 714 83 HOH HOH . 
D 4 HOH F 15 715 51 HOH HOH . 
D 4 HOH F 16 716 63 HOH HOH . 
D 4 HOH F 17 717 64 HOH HOH . 
D 4 HOH F 18 718 44 HOH HOH . 
D 4 HOH F 19 719 21 HOH HOH . 
D 4 HOH F 20 720 18 HOH HOH . 
D 4 HOH F 21 721 61 HOH HOH . 
D 4 HOH F 22 722 82 HOH HOH . 
D 4 HOH F 23 723 25 HOH HOH . 
D 4 HOH F 24 724 31 HOH HOH . 
D 4 HOH F 25 725 33 HOH HOH . 
D 4 HOH F 26 726 74 HOH HOH . 
D 4 HOH F 27 727 29 HOH HOH . 
D 4 HOH F 28 728 1 HOH HOH . 
D 4 HOH F 29 729 68 HOH HOH . 
D 4 HOH F 30 730 73 HOH HOH . 
D 4 HOH F 31 731 41 HOH HOH . 
D 4 HOH F 32 732 39 HOH HOH . 
D 4 HOH F 33 733 46 HOH HOH . 
D 4 HOH F 34 734 72 HOH HOH . 
D 4 HOH F 35 735 2 HOH HOH . 
D 4 HOH F 36 736 54 HOH HOH . 
D 4 HOH F 37 737 79 HOH HOH . 
D 4 HOH F 38 738 37 HOH HOH . 
D 4 HOH F 39 739 55 HOH HOH . 
D 4 HOH F 40 740 30 HOH HOH . 
D 4 HOH F 41 741 3 HOH HOH . 
D 4 HOH F 42 742 17 HOH HOH . 
D 4 HOH F 43 743 59 HOH HOH . 
D 4 HOH F 44 744 27 HOH HOH . 
D 4 HOH F 45 745 50 HOH HOH . 
D 4 HOH F 46 746 23 HOH HOH . 
D 4 HOH F 47 747 7 HOH HOH . 
D 4 HOH F 48 748 57 HOH HOH . 
D 4 HOH F 49 749 53 HOH HOH . 
D 4 HOH F 50 750 26 HOH HOH . 
D 4 HOH F 51 751 32 HOH HOH . 
D 4 HOH F 52 752 56 HOH HOH . 
D 4 HOH F 53 753 12 HOH HOH . 
D 4 HOH F 54 754 40 HOH HOH . 
D 4 HOH F 55 755 66 HOH HOH . 
D 4 HOH F 56 756 24 HOH HOH . 
D 4 HOH F 57 757 71 HOH HOH . 
D 4 HOH F 58 758 22 HOH HOH . 
D 4 HOH F 59 759 4 HOH HOH . 
D 4 HOH F 60 760 43 HOH HOH . 
D 4 HOH F 61 761 5 HOH HOH . 
D 4 HOH F 62 762 10 HOH HOH . 
D 4 HOH F 63 763 76 HOH HOH . 
D 4 HOH F 64 764 38 HOH HOH . 
D 4 HOH F 65 765 45 HOH HOH . 
D 4 HOH F 66 766 19 HOH HOH . 
D 4 HOH F 67 767 13 HOH HOH . 
D 4 HOH F 68 768 9 HOH HOH . 
D 4 HOH F 69 769 15 HOH HOH . 
D 4 HOH F 70 770 8 HOH HOH . 
D 4 HOH F 71 771 60 HOH HOH . 
D 4 HOH F 72 772 14 HOH HOH . 
D 4 HOH F 73 773 70 HOH HOH . 
D 4 HOH F 74 774 77 HOH HOH . 
D 4 HOH F 75 775 62 HOH HOH . 
D 4 HOH F 76 776 52 HOH HOH . 
D 4 HOH F 77 777 36 HOH HOH . 
D 4 HOH F 78 778 58 HOH HOH . 
D 4 HOH F 79 779 81 HOH HOH . 
D 4 HOH F 80 780 47 HOH HOH . 
D 4 HOH F 81 781 75 HOH HOH . 
D 4 HOH F 82 782 35 HOH HOH . 
D 4 HOH F 83 783 78 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . C 3 7.587 16.588 43.18 1 67.73 ? C1 PEG 602 F 1 
HETATM 2 O O1 PEG . . . C 3 6.162 16.465 43.045 1 67.58 ? O1 PEG 602 F 1 
HETATM 3 C C2 PEG . . . C 3 8.306 16.711 41.845 1 62.2 ? C2 PEG 602 F 1 
HETATM 4 O O2 PEG . . . C 3 8.821 15.454 41.381 1 52.04 ? O2 PEG 602 F 1 
HETATM 5 C C3 PEG . . . C 3 7.804 14.489 41.113 1 49.97 ? C3 PEG 602 F 1 
HETATM 6 C C4 PEG . . . C 3 7.048 14.847 39.862 1 51.13 ? C4 PEG 602 F 1 
HETATM 7 O O4 PEG . . . C 3 7.861 14.87 38.682 1 40.16 ? O4 PEG 602 F 1 
HETATM 8 H H11 PEG . . . C 3 7.78 17.378 43.709 1 81.44 ? H11 PEG 602 F 1 
HETATM 9 H H12 PEG . . . C 3 7.922 15.802 43.64 1 81.44 ? H12 PEG 602 F 1 
HETATM 10 H HO1 PEG . . . C 3 5.724 16.844 43.669 1 81.25 ? HO1 PEG 602 F 1 
HETATM 11 H H21 PEG . . . C 3 9.044 17.332 41.944 1 74.8 ? H21 PEG 602 F 1 
HETATM 12 H H22 PEG . . . C 3 7.682 17.053 41.185 1 74.8 ? H22 PEG 602 F 1 
HETATM 13 H H31 PEG . . . C 3 7.187 14.46 41.861 1 60.12 ? H31 PEG 602 F 1 
HETATM 14 H H32 PEG . . . C 3 8.215 13.617 40.998 1 60.12 ? H32 PEG 602 F 1 
HETATM 15 H H41 PEG . . . C 3 6.658 15.727 39.982 1 61.51 ? H41 PEG 602 F 1 
HETATM 16 H H42 PEG . . . C 3 6.341 14.195 39.735 1 61.51 ? H42 PEG 602 F 1 
HETATM 17 H HO4 PEG . . . C 3 7.567 14.383 38.047 1 48.36 ? HO4 PEG 602 F 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           17 
#