data_8W3Y # _model_server_result.job_id 7IEDrMGOae2-tpUCMtmZDw _model_server_result.datetime_utc '2025-07-14 21:28:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8w3y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8W3Y # _exptl.entry_id 8W3Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8W3Y _cell.length_a 61.293 _cell.length_b 61.293 _cell.length_c 119.431 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8W3Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MET 109 A MET 109 1_555 A N HQA 110 A HQA 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C HQA 110 A HQA 110 1_555 A N ASP 111 A ASP 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 320 n n S O2 SO4 doub 321 n n S O3 SO4 sing 322 n n S O4 SO4 sing 323 n n # _atom_sites.entry_id 8W3Y _atom_sites.fract_transf_matrix[1][1] 0.016315 _atom_sites.fract_transf_matrix[1][2] 0.00942 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018839 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008373 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 301 3 SO4 SO4 . C 2 SO4 A 1 302 4 SO4 SO4 . D 2 SO4 A 1 303 5 SO4 SO4 . E 3 GOL A 1 304 2 GOL GOL . F 4 HOH A 1 401 302 HOH HOH . F 4 HOH A 2 402 367 HOH HOH . F 4 HOH A 3 403 158 HOH HOH . F 4 HOH A 4 404 351 HOH HOH . F 4 HOH A 5 405 81 HOH HOH . F 4 HOH A 6 406 276 HOH HOH . F 4 HOH A 7 407 277 HOH HOH . F 4 HOH A 8 408 172 HOH HOH . F 4 HOH A 9 409 365 HOH HOH . F 4 HOH A 10 410 205 HOH HOH . F 4 HOH A 11 411 177 HOH HOH . F 4 HOH A 12 412 140 HOH HOH . F 4 HOH A 13 413 121 HOH HOH . F 4 HOH A 14 414 22 HOH HOH . F 4 HOH A 15 415 210 HOH HOH . F 4 HOH A 16 416 254 HOH HOH . F 4 HOH A 17 417 223 HOH HOH . F 4 HOH A 18 418 327 HOH HOH . F 4 HOH A 19 419 89 HOH HOH . F 4 HOH A 20 420 212 HOH HOH . F 4 HOH A 21 421 112 HOH HOH . F 4 HOH A 22 422 328 HOH HOH . F 4 HOH A 23 423 52 HOH HOH . F 4 HOH A 24 424 149 HOH HOH . F 4 HOH A 25 425 135 HOH HOH . F 4 HOH A 26 426 366 HOH HOH . F 4 HOH A 27 427 51 HOH HOH . F 4 HOH A 28 428 196 HOH HOH . F 4 HOH A 29 429 227 HOH HOH . F 4 HOH A 30 430 222 HOH HOH . F 4 HOH A 31 431 373 HOH HOH . F 4 HOH A 32 432 83 HOH HOH . F 4 HOH A 33 433 43 HOH HOH . F 4 HOH A 34 434 133 HOH HOH . F 4 HOH A 35 435 321 HOH HOH . F 4 HOH A 36 436 209 HOH HOH . F 4 HOH A 37 437 73 HOH HOH . F 4 HOH A 38 438 2 HOH HOH . F 4 HOH A 39 439 110 HOH HOH . F 4 HOH A 40 440 30 HOH HOH . F 4 HOH A 41 441 346 HOH HOH . F 4 HOH A 42 442 315 HOH HOH . F 4 HOH A 43 443 64 HOH HOH . F 4 HOH A 44 444 23 HOH HOH . F 4 HOH A 45 445 111 HOH HOH . F 4 HOH A 46 446 107 HOH HOH . F 4 HOH A 47 447 75 HOH HOH . F 4 HOH A 48 448 154 HOH HOH . F 4 HOH A 49 449 5 HOH HOH . F 4 HOH A 50 450 180 HOH HOH . F 4 HOH A 51 451 71 HOH HOH . F 4 HOH A 52 452 126 HOH HOH . F 4 HOH A 53 453 70 HOH HOH . F 4 HOH A 54 454 82 HOH HOH . F 4 HOH A 55 455 194 HOH HOH . F 4 HOH A 56 456 231 HOH HOH . F 4 HOH A 57 457 34 HOH HOH . F 4 HOH A 58 458 207 HOH HOH . F 4 HOH A 59 459 7 HOH HOH . F 4 HOH A 60 460 94 HOH HOH . F 4 HOH A 61 461 98 HOH HOH . F 4 HOH A 62 462 131 HOH HOH . F 4 HOH A 63 463 279 HOH HOH . F 4 HOH A 64 464 49 HOH HOH . F 4 HOH A 65 465 19 HOH HOH . F 4 HOH A 66 466 39 HOH HOH . F 4 HOH A 67 467 138 HOH HOH . F 4 HOH A 68 468 208 HOH HOH . F 4 HOH A 69 469 331 HOH HOH . F 4 HOH A 70 470 31 HOH HOH . F 4 HOH A 71 471 24 HOH HOH . F 4 HOH A 72 472 85 HOH HOH . F 4 HOH A 73 473 134 HOH HOH . F 4 HOH A 74 474 113 HOH HOH . F 4 HOH A 75 475 48 HOH HOH . F 4 HOH A 76 476 33 HOH HOH . F 4 HOH A 77 477 10 HOH HOH . F 4 HOH A 78 478 35 HOH HOH . F 4 HOH A 79 479 78 HOH HOH . F 4 HOH A 80 480 90 HOH HOH . F 4 HOH A 81 481 42 HOH HOH . F 4 HOH A 82 482 132 HOH HOH . F 4 HOH A 83 483 216 HOH HOH . F 4 HOH A 84 484 69 HOH HOH . F 4 HOH A 85 485 8 HOH HOH . F 4 HOH A 86 486 15 HOH HOH . F 4 HOH A 87 487 146 HOH HOH . F 4 HOH A 88 488 50 HOH HOH . F 4 HOH A 89 489 74 HOH HOH . F 4 HOH A 90 490 3 HOH HOH . F 4 HOH A 91 491 155 HOH HOH . F 4 HOH A 92 492 57 HOH HOH . F 4 HOH A 93 493 37 HOH HOH . F 4 HOH A 94 494 192 HOH HOH . F 4 HOH A 95 495 199 HOH HOH . F 4 HOH A 96 496 38 HOH HOH . F 4 HOH A 97 497 29 HOH HOH . F 4 HOH A 98 498 371 HOH HOH . F 4 HOH A 99 499 86 HOH HOH . F 4 HOH A 100 500 25 HOH HOH . F 4 HOH A 101 501 6 HOH HOH . F 4 HOH A 102 502 53 HOH HOH . F 4 HOH A 103 503 36 HOH HOH . F 4 HOH A 104 504 66 HOH HOH . F 4 HOH A 105 505 257 HOH HOH . F 4 HOH A 106 506 91 HOH HOH . F 4 HOH A 107 507 139 HOH HOH . F 4 HOH A 108 508 359 HOH HOH . F 4 HOH A 109 509 295 HOH HOH . F 4 HOH A 110 510 228 HOH HOH . F 4 HOH A 111 511 136 HOH HOH . F 4 HOH A 112 512 63 HOH HOH . F 4 HOH A 113 513 4 HOH HOH . F 4 HOH A 114 514 9 HOH HOH . F 4 HOH A 115 515 153 HOH HOH . F 4 HOH A 116 516 175 HOH HOH . F 4 HOH A 117 517 349 HOH HOH . F 4 HOH A 118 518 46 HOH HOH . F 4 HOH A 119 519 41 HOH HOH . F 4 HOH A 120 520 32 HOH HOH . F 4 HOH A 121 521 108 HOH HOH . F 4 HOH A 122 522 80 HOH HOH . F 4 HOH A 123 523 18 HOH HOH . F 4 HOH A 124 524 234 HOH HOH . F 4 HOH A 125 525 200 HOH HOH . F 4 HOH A 126 526 303 HOH HOH . F 4 HOH A 127 527 60 HOH HOH . F 4 HOH A 128 528 47 HOH HOH . F 4 HOH A 129 529 238 HOH HOH . F 4 HOH A 130 530 130 HOH HOH . F 4 HOH A 131 531 65 HOH HOH . F 4 HOH A 132 532 363 HOH HOH . F 4 HOH A 133 533 1 HOH HOH . F 4 HOH A 134 534 27 HOH HOH . F 4 HOH A 135 535 88 HOH HOH . F 4 HOH A 136 536 58 HOH HOH . F 4 HOH A 137 537 20 HOH HOH . F 4 HOH A 138 538 55 HOH HOH . F 4 HOH A 139 539 248 HOH HOH . F 4 HOH A 140 540 198 HOH HOH . F 4 HOH A 141 541 67 HOH HOH . F 4 HOH A 142 542 281 HOH HOH . F 4 HOH A 143 543 187 HOH HOH . F 4 HOH A 144 544 104 HOH HOH . F 4 HOH A 145 545 345 HOH HOH . F 4 HOH A 146 546 119 HOH HOH . F 4 HOH A 147 547 255 HOH HOH . F 4 HOH A 148 548 28 HOH HOH . F 4 HOH A 149 549 54 HOH HOH . F 4 HOH A 150 550 304 HOH HOH . F 4 HOH A 151 551 292 HOH HOH . F 4 HOH A 152 552 221 HOH HOH . F 4 HOH A 153 553 202 HOH HOH . F 4 HOH A 154 554 188 HOH HOH . F 4 HOH A 155 555 330 HOH HOH . F 4 HOH A 156 556 147 HOH HOH . F 4 HOH A 157 557 105 HOH HOH . F 4 HOH A 158 558 143 HOH HOH . F 4 HOH A 159 559 21 HOH HOH . F 4 HOH A 160 560 103 HOH HOH . F 4 HOH A 161 561 307 HOH HOH . F 4 HOH A 162 562 163 HOH HOH . F 4 HOH A 163 563 312 HOH HOH . F 4 HOH A 164 564 322 HOH HOH . F 4 HOH A 165 565 298 HOH HOH . F 4 HOH A 166 566 204 HOH HOH . F 4 HOH A 167 567 17 HOH HOH . F 4 HOH A 168 568 122 HOH HOH . F 4 HOH A 169 569 290 HOH HOH . F 4 HOH A 170 570 109 HOH HOH . F 4 HOH A 171 571 271 HOH HOH . F 4 HOH A 172 572 117 HOH HOH . F 4 HOH A 173 573 176 HOH HOH . F 4 HOH A 174 574 26 HOH HOH . F 4 HOH A 175 575 252 HOH HOH . F 4 HOH A 176 576 324 HOH HOH . F 4 HOH A 177 577 92 HOH HOH . F 4 HOH A 178 578 141 HOH HOH . F 4 HOH A 179 579 350 HOH HOH . F 4 HOH A 180 580 44 HOH HOH . F 4 HOH A 181 581 294 HOH HOH . F 4 HOH A 182 582 161 HOH HOH . F 4 HOH A 183 583 142 HOH HOH . F 4 HOH A 184 584 291 HOH HOH . F 4 HOH A 185 585 120 HOH HOH . F 4 HOH A 186 586 317 HOH HOH . F 4 HOH A 187 587 191 HOH HOH . F 4 HOH A 188 588 314 HOH HOH . F 4 HOH A 189 589 368 HOH HOH . F 4 HOH A 190 590 206 HOH HOH . F 4 HOH A 191 591 261 HOH HOH . F 4 HOH A 192 592 236 HOH HOH . F 4 HOH A 193 593 40 HOH HOH . F 4 HOH A 194 594 166 HOH HOH . F 4 HOH A 195 595 129 HOH HOH . F 4 HOH A 196 596 241 HOH HOH . F 4 HOH A 197 597 313 HOH HOH . F 4 HOH A 198 598 297 HOH HOH . F 4 HOH A 199 599 329 HOH HOH . F 4 HOH A 200 600 137 HOH HOH . F 4 HOH A 201 601 235 HOH HOH . F 4 HOH A 202 602 283 HOH HOH . F 4 HOH A 203 603 189 HOH HOH . F 4 HOH A 204 604 251 HOH HOH . F 4 HOH A 205 605 115 HOH HOH . F 4 HOH A 206 606 320 HOH HOH . F 4 HOH A 207 607 195 HOH HOH . F 4 HOH A 208 608 333 HOH HOH . F 4 HOH A 209 609 219 HOH HOH . F 4 HOH A 210 610 310 HOH HOH . F 4 HOH A 211 611 323 HOH HOH . F 4 HOH A 212 612 352 HOH HOH . F 4 HOH A 213 613 77 HOH HOH . F 4 HOH A 214 614 343 HOH HOH . F 4 HOH A 215 615 240 HOH HOH . F 4 HOH A 216 616 338 HOH HOH . F 4 HOH A 217 617 197 HOH HOH . F 4 HOH A 218 618 45 HOH HOH . F 4 HOH A 219 619 369 HOH HOH . F 4 HOH A 220 620 249 HOH HOH . F 4 HOH A 221 621 201 HOH HOH . F 4 HOH A 222 622 97 HOH HOH . F 4 HOH A 223 623 144 HOH HOH . F 4 HOH A 224 624 168 HOH HOH . F 4 HOH A 225 625 353 HOH HOH . F 4 HOH A 226 626 265 HOH HOH . F 4 HOH A 227 627 360 HOH HOH . F 4 HOH A 228 628 225 HOH HOH . F 4 HOH A 229 629 211 HOH HOH . F 4 HOH A 230 630 151 HOH HOH . F 4 HOH A 231 631 272 HOH HOH . F 4 HOH A 232 632 100 HOH HOH . F 4 HOH A 233 633 260 HOH HOH . F 4 HOH A 234 634 123 HOH HOH . F 4 HOH A 235 635 239 HOH HOH . F 4 HOH A 236 636 256 HOH HOH . F 4 HOH A 237 637 286 HOH HOH . F 4 HOH A 238 638 364 HOH HOH . F 4 HOH A 239 639 356 HOH HOH . F 4 HOH A 240 640 106 HOH HOH . F 4 HOH A 241 641 273 HOH HOH . F 4 HOH A 242 642 59 HOH HOH . F 4 HOH A 243 643 275 HOH HOH . F 4 HOH A 244 644 93 HOH HOH . F 4 HOH A 245 645 174 HOH HOH . F 4 HOH A 246 646 336 HOH HOH . F 4 HOH A 247 647 355 HOH HOH . F 4 HOH A 248 648 253 HOH HOH . F 4 HOH A 249 649 370 HOH HOH . F 4 HOH A 250 650 157 HOH HOH . F 4 HOH A 251 651 309 HOH HOH . F 4 HOH A 252 652 101 HOH HOH . F 4 HOH A 253 653 301 HOH HOH . F 4 HOH A 254 654 296 HOH HOH . F 4 HOH A 255 655 160 HOH HOH . F 4 HOH A 256 656 125 HOH HOH . F 4 HOH A 257 657 325 HOH HOH . F 4 HOH A 258 658 340 HOH HOH . F 4 HOH A 259 659 319 HOH HOH . F 4 HOH A 260 660 361 HOH HOH . F 4 HOH A 261 661 372 HOH HOH . F 4 HOH A 262 662 190 HOH HOH . F 4 HOH A 263 663 299 HOH HOH . F 4 HOH A 264 664 61 HOH HOH . F 4 HOH A 265 665 237 HOH HOH . F 4 HOH A 266 666 344 HOH HOH . F 4 HOH A 267 667 124 HOH HOH . F 4 HOH A 268 668 305 HOH HOH . F 4 HOH A 269 669 159 HOH HOH . F 4 HOH A 270 670 203 HOH HOH . F 4 HOH A 271 671 56 HOH HOH . F 4 HOH A 272 672 118 HOH HOH . F 4 HOH A 273 673 341 HOH HOH . F 4 HOH A 274 674 165 HOH HOH . F 4 HOH A 275 675 326 HOH HOH . F 4 HOH A 276 676 164 HOH HOH . F 4 HOH A 277 677 337 HOH HOH . F 4 HOH A 278 678 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 -12.003 7.742 24.208 1 72.73 ? S SO4 301 A 1 HETATM 2 O O1 SO4 . . . B 2 -12.519 6.425 23.848 1 74.33 ? O1 SO4 301 A 1 HETATM 3 O O2 SO4 . . . B 2 -11.737 8.529 23.007 1 70.9 ? O2 SO4 301 A 1 HETATM 4 O O3 SO4 . . . B 2 -12.984 8.442 25.027 1 74.57 -1 O3 SO4 301 A 1 HETATM 5 O O4 SO4 . . . B 2 -10.777 7.567 24.975 1 73.87 ? O4 SO4 301 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #