data_8W42 # _model_server_result.job_id yHkSIz7LOIIhGfSTSNJCxQ _model_server_result.datetime_utc '2024-11-18 09:49:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8w42 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 8W42 # _exptl.entry_id 8W42 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.243 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description RESVERATROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8W42 _cell.length_a 43.168 _cell.length_b 84.044 _cell.length_c 62.691 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8W42 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -43.168 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O ASP 131 B ASP 99 1_555 E NA NA . B NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc2 E NA NA . B NA 202 1_555 G O HOH . B HOH 306 4_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc3 E NA NA . B NA 202 1_555 G O HOH . B HOH 341 4_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc4 E NA NA . B NA 202 1_555 G O HOH . B HOH 368 4_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? # _chem_comp.formula 'C14 H12 O3' _chem_comp.formula_weight 228.243 _chem_comp.id STL _chem_comp.mon_nstd_flag . _chem_comp.name RESVERATROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 STL doub 271 n y C1 C6 STL sing 272 n y C1 O3 STL sing 273 n n C2 C3 STL sing 274 n y C2 H2 STL sing 275 n n C3 C4 STL doub 276 n y C3 O2 STL sing 277 n n C4 C5 STL sing 278 n y C4 H4 STL sing 279 n n C5 C6 STL doub 280 n y C5 C7 STL sing 281 n n C6 H6 STL sing 282 n n C7 C8 STL doub 283 e n C7 H7 STL sing 284 n n C8 C9 STL sing 285 n n C8 H8 STL sing 286 n n C9 C10 STL doub 287 n y C9 C14 STL sing 288 n y C10 C11 STL sing 289 n y C10 H10 STL sing 290 n n C11 C12 STL doub 291 n y C11 H11 STL sing 292 n n C12 C13 STL sing 293 n y C12 O1 STL sing 294 n n C13 C14 STL doub 295 n y C13 H13 STL sing 296 n n C14 H14 STL sing 297 n n O1 HO1 STL sing 298 n n O2 HO2 STL sing 299 n n O3 HO3 STL sing 300 n n # _atom_sites.entry_id 8W42 _atom_sites.fract_transf_matrix[1][1] 0.023165 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011899 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015951 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 STL A 1 200 200 STL DRG . D 2 STL B 1 201 200 STL DRG . E 3 NA B 1 202 1 NA NA . F 4 HOH A 1 301 133 HOH HOH . F 4 HOH A 2 302 5 HOH HOH . F 4 HOH A 3 303 20 HOH HOH . F 4 HOH A 4 304 122 HOH HOH . F 4 HOH A 5 305 93 HOH HOH . F 4 HOH A 6 306 130 HOH HOH . F 4 HOH A 7 307 110 HOH HOH . F 4 HOH A 8 308 85 HOH HOH . F 4 HOH A 9 309 118 HOH HOH . F 4 HOH A 10 310 37 HOH HOH . F 4 HOH A 11 311 83 HOH HOH . F 4 HOH A 12 312 134 HOH HOH . F 4 HOH A 13 313 21 HOH HOH . F 4 HOH A 14 314 165 HOH HOH . F 4 HOH A 15 315 111 HOH HOH . F 4 HOH A 16 316 45 HOH HOH . F 4 HOH A 17 317 48 HOH HOH . F 4 HOH A 18 318 73 HOH HOH . F 4 HOH A 19 319 79 HOH HOH . F 4 HOH A 20 320 72 HOH HOH . F 4 HOH A 21 321 36 HOH HOH . F 4 HOH A 22 322 1 HOH HOH . F 4 HOH A 23 323 17 HOH HOH . F 4 HOH A 24 324 125 HOH HOH . F 4 HOH A 25 325 92 HOH HOH . F 4 HOH A 26 326 132 HOH HOH . F 4 HOH A 27 327 172 HOH HOH . F 4 HOH A 28 328 28 HOH HOH . F 4 HOH A 29 329 4 HOH HOH . F 4 HOH A 30 330 77 HOH HOH . F 4 HOH A 31 331 29 HOH HOH . F 4 HOH A 32 332 157 HOH HOH . F 4 HOH A 33 333 47 HOH HOH . F 4 HOH A 34 334 84 HOH HOH . F 4 HOH A 35 335 103 HOH HOH . F 4 HOH A 36 336 18 HOH HOH . F 4 HOH A 37 337 10 HOH HOH . F 4 HOH A 38 338 70 HOH HOH . F 4 HOH A 39 339 60 HOH HOH . F 4 HOH A 40 340 16 HOH HOH . F 4 HOH A 41 341 6 HOH HOH . F 4 HOH A 42 342 49 HOH HOH . F 4 HOH A 43 343 32 HOH HOH . F 4 HOH A 44 344 14 HOH HOH . F 4 HOH A 45 345 144 HOH HOH . F 4 HOH A 46 346 52 HOH HOH . F 4 HOH A 47 347 91 HOH HOH . F 4 HOH A 48 348 74 HOH HOH . F 4 HOH A 49 349 26 HOH HOH . F 4 HOH A 50 350 160 HOH HOH . F 4 HOH A 51 351 131 HOH HOH . F 4 HOH A 52 352 56 HOH HOH . F 4 HOH A 53 353 104 HOH HOH . F 4 HOH A 54 354 76 HOH HOH . F 4 HOH A 55 355 135 HOH HOH . F 4 HOH A 56 356 136 HOH HOH . F 4 HOH A 57 357 87 HOH HOH . F 4 HOH A 58 358 75 HOH HOH . F 4 HOH A 59 359 143 HOH HOH . F 4 HOH A 60 360 65 HOH HOH . F 4 HOH A 61 361 158 HOH HOH . F 4 HOH A 62 362 168 HOH HOH . F 4 HOH A 63 363 138 HOH HOH . F 4 HOH A 64 364 27 HOH HOH . F 4 HOH A 65 365 173 HOH HOH . F 4 HOH A 66 366 129 HOH HOH . F 4 HOH A 67 367 161 HOH HOH . F 4 HOH A 68 368 89 HOH HOH . F 4 HOH A 69 369 121 HOH HOH . F 4 HOH A 70 370 150 HOH HOH . F 4 HOH A 71 371 106 HOH HOH . F 4 HOH A 72 372 141 HOH HOH . F 4 HOH A 73 373 107 HOH HOH . F 4 HOH A 74 374 95 HOH HOH . F 4 HOH A 75 375 53 HOH HOH . F 4 HOH A 76 376 55 HOH HOH . F 4 HOH A 77 377 162 HOH HOH . F 4 HOH A 78 378 86 HOH HOH . F 4 HOH A 79 379 100 HOH HOH . F 4 HOH A 80 380 88 HOH HOH . F 4 HOH A 81 381 94 HOH HOH . F 4 HOH A 82 382 99 HOH HOH . F 4 HOH A 83 383 170 HOH HOH . F 4 HOH A 84 384 115 HOH HOH . F 4 HOH A 85 385 142 HOH HOH . F 4 HOH A 86 386 175 HOH HOH . F 4 HOH A 87 387 109 HOH HOH . F 4 HOH A 88 388 127 HOH HOH . F 4 HOH A 89 389 167 HOH HOH . F 4 HOH A 90 390 146 HOH HOH . F 4 HOH A 91 391 155 HOH HOH . G 4 HOH B 1 301 69 HOH HOH . G 4 HOH B 2 302 156 HOH HOH . G 4 HOH B 3 303 112 HOH HOH . G 4 HOH B 4 304 51 HOH HOH . G 4 HOH B 5 305 66 HOH HOH . G 4 HOH B 6 306 80 HOH HOH . G 4 HOH B 7 307 147 HOH HOH . G 4 HOH B 8 308 19 HOH HOH . G 4 HOH B 9 309 34 HOH HOH . G 4 HOH B 10 310 119 HOH HOH . G 4 HOH B 11 311 11 HOH HOH . G 4 HOH B 12 312 148 HOH HOH . G 4 HOH B 13 313 116 HOH HOH . G 4 HOH B 14 314 102 HOH HOH . G 4 HOH B 15 315 81 HOH HOH . G 4 HOH B 16 316 137 HOH HOH . G 4 HOH B 17 317 59 HOH HOH . G 4 HOH B 18 318 31 HOH HOH . G 4 HOH B 19 319 43 HOH HOH . G 4 HOH B 20 320 30 HOH HOH . G 4 HOH B 21 321 13 HOH HOH . G 4 HOH B 22 322 42 HOH HOH . G 4 HOH B 23 323 2 HOH HOH . G 4 HOH B 24 324 7 HOH HOH . G 4 HOH B 25 325 12 HOH HOH . G 4 HOH B 26 326 35 HOH HOH . G 4 HOH B 27 327 63 HOH HOH . G 4 HOH B 28 328 151 HOH HOH . G 4 HOH B 29 329 15 HOH HOH . G 4 HOH B 30 330 128 HOH HOH . G 4 HOH B 31 331 9 HOH HOH . G 4 HOH B 32 332 3 HOH HOH . G 4 HOH B 33 333 163 HOH HOH . G 4 HOH B 34 334 39 HOH HOH . G 4 HOH B 35 335 97 HOH HOH . G 4 HOH B 36 336 8 HOH HOH . G 4 HOH B 37 337 40 HOH HOH . G 4 HOH B 38 338 41 HOH HOH . G 4 HOH B 39 339 166 HOH HOH . G 4 HOH B 40 340 25 HOH HOH . G 4 HOH B 41 341 105 HOH HOH . G 4 HOH B 42 342 154 HOH HOH . G 4 HOH B 43 343 64 HOH HOH . G 4 HOH B 44 344 33 HOH HOH . G 4 HOH B 45 345 50 HOH HOH . G 4 HOH B 46 346 101 HOH HOH . G 4 HOH B 47 347 71 HOH HOH . G 4 HOH B 48 348 38 HOH HOH . G 4 HOH B 49 349 152 HOH HOH . G 4 HOH B 50 350 108 HOH HOH . G 4 HOH B 51 351 145 HOH HOH . G 4 HOH B 52 352 57 HOH HOH . G 4 HOH B 53 353 22 HOH HOH . G 4 HOH B 54 354 78 HOH HOH . G 4 HOH B 55 355 113 HOH HOH . G 4 HOH B 56 356 61 HOH HOH . G 4 HOH B 57 357 98 HOH HOH . G 4 HOH B 58 358 123 HOH HOH . G 4 HOH B 59 359 169 HOH HOH . G 4 HOH B 60 360 23 HOH HOH . G 4 HOH B 61 361 46 HOH HOH . G 4 HOH B 62 362 62 HOH HOH . G 4 HOH B 63 363 82 HOH HOH . G 4 HOH B 64 364 90 HOH HOH . G 4 HOH B 65 365 24 HOH HOH . G 4 HOH B 66 366 96 HOH HOH . G 4 HOH B 67 367 159 HOH HOH . G 4 HOH B 68 368 140 HOH HOH . G 4 HOH B 69 369 120 HOH HOH . G 4 HOH B 70 370 67 HOH HOH . G 4 HOH B 71 371 153 HOH HOH . G 4 HOH B 72 372 171 HOH HOH . G 4 HOH B 73 373 164 HOH HOH . G 4 HOH B 74 374 126 HOH HOH . G 4 HOH B 75 375 54 HOH HOH . G 4 HOH B 76 376 114 HOH HOH . G 4 HOH B 77 377 58 HOH HOH . G 4 HOH B 78 378 68 HOH HOH . G 4 HOH B 79 379 117 HOH HOH . G 4 HOH B 80 380 44 HOH HOH . G 4 HOH B 81 381 139 HOH HOH . G 4 HOH B 82 382 124 HOH HOH . G 4 HOH B 83 383 174 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 STL . A . D 2 -20.588 1.25 -29.255 0.25 28 ? C1 STL 201 B 1 HETATM 2 C C1 STL . B . D 2 -21.868 -1.241 -21.217 0.25 18.08 ? C1 STL 201 B 1 HETATM 3 C C2 STL . A . D 2 -21.34 0.224 -29.817 0.25 28.13 ? C2 STL 201 B 1 HETATM 4 C C2 STL . B . D 2 -21.638 0.001 -20.638 0.25 17.96 ? C2 STL 201 B 1 HETATM 5 C C3 STL . A . D 2 -22.036 -0.661 -28.997 0.25 27.66 ? C3 STL 201 B 1 HETATM 6 C C3 STL . B . D 2 -21.441 1.115 -21.448 0.25 17.65 ? C3 STL 201 B 1 HETATM 7 C C4 STL . A . D 2 -21.983 -0.515 -27.614 0.25 25.84 ? C4 STL 201 B 1 HETATM 8 C C4 STL . B . D 2 -21.473 0.987 -22.834 0.25 17.85 ? C4 STL 201 B 1 HETATM 9 C C5 STL . A . D 2 -21.233 0.514 -27.054 0.25 25.63 ? C5 STL 201 B 1 HETATM 10 C C5 STL . B . D 2 -21.701 -0.255 -23.415 0.25 17.53 ? C5 STL 201 B 1 HETATM 11 C C6 STL . A . D 2 -20.539 1.392 -27.875 0.25 26.71 ? C6 STL 201 B 1 HETATM 12 C C6 STL . B . D 2 -21.901 -1.366 -22.602 0.25 18.31 ? C6 STL 201 B 1 HETATM 13 C C7 STL . A . D 2 -21.166 0.681 -25.673 0.25 24.73 ? C7 STL 201 B 1 HETATM 14 C C7 STL . B . D 2 -21.742 -0.409 -24.799 0.25 18.64 ? C7 STL 201 B 1 HETATM 15 C C8 STL . A . D 2 -21.755 -0.455 -24.838 0.25 23.2 ? C8 STL 201 B 1 HETATM 16 C C8 STL . B . D 2 -21.124 0.714 -25.628 0.25 21.43 ? C8 STL 201 B 1 HETATM 17 C C9 STL . A . D 2 -21.688 -0.293 -23.457 0.25 22.64 ? C9 STL 201 B 1 HETATM 18 C C9 STL . B . D 2 -21.171 0.549 -27.012 0.25 22.81 ? C9 STL 201 B 1 HETATM 19 C C10 STL . A . D 2 -21.549 0.97 -22.892 0.25 23.35 ? C10 STL 201 B 1 HETATM 20 C C10 STL . B . D 2 -21.922 -0.469 -27.593 0.25 22.9 ? C10 STL 201 B 1 HETATM 21 C C11 STL . A . D 2 -21.486 1.111 -21.509 0.25 23.65 ? C11 STL 201 B 1 HETATM 22 C C11 STL . B . D 2 -21.952 -0.608 -28.979 0.25 25.07 ? C11 STL 201 B 1 HETATM 23 C C12 STL . A . D 2 -21.561 -0.01 -20.689 0.25 23.66 ? C12 STL 201 B 1 HETATM 24 C C12 STL . B . D 2 -21.234 0.274 -29.785 0.25 26.36 ? C12 STL 201 B 1 HETATM 25 C C13 STL . A . D 2 -21.701 -1.273 -21.253 0.25 23.33 ? C13 STL 201 B 1 HETATM 26 C C13 STL . B . D 2 -20.485 1.287 -29.202 0.25 25.83 ? C13 STL 201 B 1 HETATM 27 C C14 STL . A . D 2 -21.765 -1.413 -22.635 0.25 23.14 ? C14 STL 201 B 1 HETATM 28 C C14 STL . B . D 2 -20.457 1.425 -27.82 0.25 24.23 ? C14 STL 201 B 1 HETATM 29 O O1 STL . A . D 2 -21.499 0.124 -19.337 0.25 23.8 ? O1 STL 201 B 1 HETATM 30 O O1 STL . B . D 2 -21.254 0.149 -31.142 0.25 27.52 ? O1 STL 201 B 1 HETATM 31 O O2 STL . A . D 2 -22.769 -1.666 -29.549 0.25 28.78 ? O2 STL 201 B 1 HETATM 32 O O2 STL . B . D 2 -21.214 2.329 -20.88 0.25 17.45 ? O2 STL 201 B 1 HETATM 33 O O3 STL . A . D 2 -19.903 2.12 -30.047 0.25 28.28 ? O3 STL 201 B 1 HETATM 34 O O3 STL . B . D 2 -22.064 -2.333 -20.431 0.25 18.08 ? O3 STL 201 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 34 #