data_8W44 # _model_server_result.job_id qfTa9yUe0NmTGQMd4ACNSg _model_server_result.datetime_utc '2024-11-18 11:50:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8w44 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 8W44 # _exptl.entry_id 8W44 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.243 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description trans-oxyresveratrol _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8W44 _cell.length_a 43.226 _cell.length_b 84.334 _cell.length_c 62.916 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8W44 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,B,C,D,E,F,G,H,I 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -43.226 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 131 A ASP 99 1_555 D NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc2 D NA NA . A NA 202 1_555 H O HOH . A HOH 324 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc3 D NA NA . A NA 202 1_555 H O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc4 D NA NA . A NA 202 1_555 H O HOH . A HOH 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc5 D NA NA . A NA 202 1_555 H O HOH . A HOH 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc6 B O ASP 131 B ASP 99 1_555 G NA NA . B NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc7 G NA NA . B NA 203 1_555 I O HOH . B HOH 305 4_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc8 G NA NA . B NA 203 1_555 I O HOH . B HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc9 G NA NA . B NA 203 1_555 I O HOH . B HOH 350 4_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? # _chem_comp.formula 'C14 H12 O4' _chem_comp.formula_weight 244.243 _chem_comp.id EZE _chem_comp.mon_nstd_flag . _chem_comp.name trans-oxyresveratrol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O14 C13 EZE sing 83 n n C13 C12 EZE doub 84 n y C13 C15 EZE sing 85 n y C12 C10 EZE sing 86 n y C15 C8 EZE doub 87 n y C10 O11 EZE sing 88 n n C10 C9 EZE doub 89 n y C8 C9 EZE sing 90 n y C8 C7 EZE sing 91 n n O17 C16 EZE sing 92 n n C6 C7 EZE doub 93 e n C6 C5 EZE sing 94 n n C16 C5 EZE doub 95 n y C16 C18 EZE sing 96 n y C5 C4 EZE sing 97 n y C18 C2 EZE doub 98 n y C4 C3 EZE doub 99 n y C2 C3 EZE sing 100 n y C2 O1 EZE sing 101 n n C4 H21 EZE sing 102 n n C6 H22 EZE sing 103 n n C7 H23 EZE sing 104 n n C15 H28 EZE sing 105 n n O1 H19 EZE sing 106 n n C3 H20 EZE sing 107 n n C9 H24 EZE sing 108 n n O11 H25 EZE sing 109 n n C12 H26 EZE sing 110 n n O14 H27 EZE sing 111 n n O17 H29 EZE sing 112 n n C18 H30 EZE sing 113 n n # _atom_sites.entry_id 8W44 _atom_sites.fract_transf_matrix[1][1] 0.023134 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011858 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015894 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EZE A 1 201 201 EZE DRG . D 3 NA A 1 202 1 NA NA . E 2 EZE B 1 201 202 EZE DRG . F 2 EZE B 1 202 201 EZE DRG . G 3 NA B 1 203 1 NA NA . H 4 HOH A 1 301 139 HOH HOH . H 4 HOH A 2 302 150 HOH HOH . H 4 HOH A 3 303 3 HOH HOH . H 4 HOH A 4 304 104 HOH HOH . H 4 HOH A 5 305 176 HOH HOH . H 4 HOH A 6 306 27 HOH HOH . H 4 HOH A 7 307 79 HOH HOH . H 4 HOH A 8 308 68 HOH HOH . H 4 HOH A 9 309 23 HOH HOH . H 4 HOH A 10 310 77 HOH HOH . H 4 HOH A 11 311 92 HOH HOH . H 4 HOH A 12 312 57 HOH HOH . H 4 HOH A 13 313 74 HOH HOH . H 4 HOH A 14 314 71 HOH HOH . H 4 HOH A 15 315 125 HOH HOH . H 4 HOH A 16 316 82 HOH HOH . H 4 HOH A 17 317 147 HOH HOH . H 4 HOH A 18 318 25 HOH HOH . H 4 HOH A 19 319 15 HOH HOH . H 4 HOH A 20 320 39 HOH HOH . H 4 HOH A 21 321 63 HOH HOH . H 4 HOH A 22 322 2 HOH HOH . H 4 HOH A 23 323 83 HOH HOH . H 4 HOH A 24 324 120 HOH HOH . H 4 HOH A 25 325 21 HOH HOH . H 4 HOH A 26 326 169 HOH HOH . H 4 HOH A 27 327 7 HOH HOH . H 4 HOH A 28 328 19 HOH HOH . H 4 HOH A 29 329 165 HOH HOH . H 4 HOH A 30 330 14 HOH HOH . H 4 HOH A 31 331 32 HOH HOH . H 4 HOH A 32 332 43 HOH HOH . H 4 HOH A 33 333 35 HOH HOH . H 4 HOH A 34 334 69 HOH HOH . H 4 HOH A 35 335 5 HOH HOH . H 4 HOH A 36 336 170 HOH HOH . H 4 HOH A 37 337 157 HOH HOH . H 4 HOH A 38 338 13 HOH HOH . H 4 HOH A 39 339 98 HOH HOH . H 4 HOH A 40 340 122 HOH HOH . H 4 HOH A 41 341 28 HOH HOH . H 4 HOH A 42 342 73 HOH HOH . H 4 HOH A 43 343 40 HOH HOH . H 4 HOH A 44 344 175 HOH HOH . H 4 HOH A 45 345 20 HOH HOH . H 4 HOH A 46 346 179 HOH HOH . H 4 HOH A 47 347 149 HOH HOH . H 4 HOH A 48 348 50 HOH HOH . H 4 HOH A 49 349 124 HOH HOH . H 4 HOH A 50 350 76 HOH HOH . H 4 HOH A 51 351 65 HOH HOH . H 4 HOH A 52 352 131 HOH HOH . H 4 HOH A 53 353 58 HOH HOH . H 4 HOH A 54 354 80 HOH HOH . H 4 HOH A 55 355 70 HOH HOH . H 4 HOH A 56 356 146 HOH HOH . H 4 HOH A 57 357 108 HOH HOH . H 4 HOH A 58 358 103 HOH HOH . H 4 HOH A 59 359 182 HOH HOH . H 4 HOH A 60 360 101 HOH HOH . H 4 HOH A 61 361 81 HOH HOH . H 4 HOH A 62 362 114 HOH HOH . H 4 HOH A 63 363 102 HOH HOH . H 4 HOH A 64 364 178 HOH HOH . H 4 HOH A 65 365 72 HOH HOH . H 4 HOH A 66 366 64 HOH HOH . H 4 HOH A 67 367 172 HOH HOH . H 4 HOH A 68 368 96 HOH HOH . H 4 HOH A 69 369 115 HOH HOH . H 4 HOH A 70 370 134 HOH HOH . H 4 HOH A 71 371 128 HOH HOH . H 4 HOH A 72 372 90 HOH HOH . H 4 HOH A 73 373 183 HOH HOH . H 4 HOH A 74 374 158 HOH HOH . H 4 HOH A 75 375 189 HOH HOH . H 4 HOH A 76 376 142 HOH HOH . H 4 HOH A 77 377 78 HOH HOH . H 4 HOH A 78 378 180 HOH HOH . H 4 HOH A 79 379 185 HOH HOH . H 4 HOH A 80 380 137 HOH HOH . H 4 HOH A 81 381 44 HOH HOH . H 4 HOH A 82 382 117 HOH HOH . H 4 HOH A 83 383 85 HOH HOH . H 4 HOH A 84 384 184 HOH HOH . H 4 HOH A 85 385 141 HOH HOH . H 4 HOH A 86 386 136 HOH HOH . H 4 HOH A 87 387 152 HOH HOH . H 4 HOH A 88 388 46 HOH HOH . H 4 HOH A 89 389 191 HOH HOH . H 4 HOH A 90 390 129 HOH HOH . H 4 HOH A 91 391 138 HOH HOH . H 4 HOH A 92 392 112 HOH HOH . H 4 HOH A 93 393 161 HOH HOH . H 4 HOH A 94 394 177 HOH HOH . H 4 HOH A 95 395 99 HOH HOH . H 4 HOH A 96 396 140 HOH HOH . H 4 HOH A 97 397 144 HOH HOH . I 4 HOH B 1 301 154 HOH HOH . I 4 HOH B 2 302 94 HOH HOH . I 4 HOH B 3 303 153 HOH HOH . I 4 HOH B 4 304 100 HOH HOH . I 4 HOH B 5 305 110 HOH HOH . I 4 HOH B 6 306 187 HOH HOH . I 4 HOH B 7 307 132 HOH HOH . I 4 HOH B 8 308 61 HOH HOH . I 4 HOH B 9 309 31 HOH HOH . I 4 HOH B 10 310 60 HOH HOH . I 4 HOH B 11 311 16 HOH HOH . I 4 HOH B 12 312 121 HOH HOH . I 4 HOH B 13 313 105 HOH HOH . I 4 HOH B 14 314 86 HOH HOH . I 4 HOH B 15 315 52 HOH HOH . I 4 HOH B 16 316 188 HOH HOH . I 4 HOH B 17 317 97 HOH HOH . I 4 HOH B 18 318 26 HOH HOH . I 4 HOH B 19 319 118 HOH HOH . I 4 HOH B 20 320 30 HOH HOH . I 4 HOH B 21 321 106 HOH HOH . I 4 HOH B 22 322 10 HOH HOH . I 4 HOH B 23 323 54 HOH HOH . I 4 HOH B 24 324 1 HOH HOH . I 4 HOH B 25 325 6 HOH HOH . I 4 HOH B 26 326 162 HOH HOH . I 4 HOH B 27 327 12 HOH HOH . I 4 HOH B 28 328 164 HOH HOH . I 4 HOH B 29 329 8 HOH HOH . I 4 HOH B 30 330 119 HOH HOH . I 4 HOH B 31 331 42 HOH HOH . I 4 HOH B 32 332 51 HOH HOH . I 4 HOH B 33 333 127 HOH HOH . I 4 HOH B 34 334 45 HOH HOH . I 4 HOH B 35 335 109 HOH HOH . I 4 HOH B 36 336 4 HOH HOH . I 4 HOH B 37 337 166 HOH HOH . I 4 HOH B 38 338 33 HOH HOH . I 4 HOH B 39 339 17 HOH HOH . I 4 HOH B 40 340 163 HOH HOH . I 4 HOH B 41 341 18 HOH HOH . I 4 HOH B 42 342 167 HOH HOH . I 4 HOH B 43 343 22 HOH HOH . I 4 HOH B 44 344 156 HOH HOH . I 4 HOH B 45 345 41 HOH HOH . I 4 HOH B 46 346 11 HOH HOH . I 4 HOH B 47 347 9 HOH HOH . I 4 HOH B 48 348 47 HOH HOH . I 4 HOH B 49 349 34 HOH HOH . I 4 HOH B 50 350 56 HOH HOH . I 4 HOH B 51 351 49 HOH HOH . I 4 HOH B 52 352 111 HOH HOH . I 4 HOH B 53 353 38 HOH HOH . I 4 HOH B 54 354 53 HOH HOH . I 4 HOH B 55 355 133 HOH HOH . I 4 HOH B 56 356 148 HOH HOH . I 4 HOH B 57 357 168 HOH HOH . I 4 HOH B 58 358 37 HOH HOH . I 4 HOH B 59 359 88 HOH HOH . I 4 HOH B 60 360 181 HOH HOH . I 4 HOH B 61 361 67 HOH HOH . I 4 HOH B 62 362 159 HOH HOH . I 4 HOH B 63 363 24 HOH HOH . I 4 HOH B 64 364 174 HOH HOH . I 4 HOH B 65 365 186 HOH HOH . I 4 HOH B 66 366 36 HOH HOH . I 4 HOH B 67 367 29 HOH HOH . I 4 HOH B 68 368 59 HOH HOH . I 4 HOH B 69 369 95 HOH HOH . I 4 HOH B 70 370 87 HOH HOH . I 4 HOH B 71 371 123 HOH HOH . I 4 HOH B 72 372 190 HOH HOH . I 4 HOH B 73 373 66 HOH HOH . I 4 HOH B 74 374 107 HOH HOH . I 4 HOH B 75 375 89 HOH HOH . I 4 HOH B 76 376 84 HOH HOH . I 4 HOH B 77 377 151 HOH HOH . I 4 HOH B 78 378 130 HOH HOH . I 4 HOH B 79 379 126 HOH HOH . I 4 HOH B 80 380 113 HOH HOH . I 4 HOH B 81 381 91 HOH HOH . I 4 HOH B 82 382 48 HOH HOH . I 4 HOH B 83 383 93 HOH HOH . I 4 HOH B 84 384 173 HOH HOH . I 4 HOH B 85 385 143 HOH HOH . I 4 HOH B 86 386 171 HOH HOH . I 4 HOH B 87 387 160 HOH HOH . I 4 HOH B 88 388 155 HOH HOH . I 4 HOH B 89 389 116 HOH HOH . I 4 HOH B 90 390 55 HOH HOH . I 4 HOH B 91 391 145 HOH HOH . I 4 HOH B 92 392 75 HOH HOH . I 4 HOH B 93 393 62 HOH HOH . I 4 HOH B 94 394 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 EZE . . . E 2 -42.744 0.124 -21.447 0.5 45.96 ? C4 EZE 201 B 1 HETATM 2 C C5 EZE . . . E 2 -42 -0.873 -22.074 0.5 45.03 ? C5 EZE 201 B 1 HETATM 3 C C6 EZE . . . E 2 -41.143 -1.618 -21.248 0.5 42.19 ? C6 EZE 201 B 1 HETATM 4 C C7 EZE . . . E 2 -40.727 -3.037 -21.656 0.5 39.47 ? C7 EZE 201 B 1 HETATM 5 C C8 EZE . . . E 2 -39.872 -3.697 -20.779 0.5 37.12 ? C8 EZE 201 B 1 HETATM 6 C C10 EZE . . . E 2 -38.18 -5.37 -20.396 0.5 37.21 ? C10 EZE 201 B 1 HETATM 7 C C13 EZE . . . E 2 -38.994 -4.045 -18.565 0.5 36.55 ? C13 EZE 201 B 1 HETATM 8 C C15 EZE . . . E 2 -39.845 -3.364 -19.431 0.5 36.08 ? C15 EZE 201 B 1 HETATM 9 O O1 EZE . . . E 2 -44.619 1.551 -24.239 0.5 47.33 ? O1 EZE 201 B 1 HETATM 10 C C2 EZE . . . E 2 -43.765 0.763 -23.533 0.5 46.92 ? C2 EZE 201 B 1 HETATM 11 C C3 EZE . . . E 2 -43.622 0.933 -22.162 0.5 46.81 ? C3 EZE 201 B 1 HETATM 12 C C9 EZE . . . E 2 -39.039 -4.701 -21.261 0.5 37.24 ? C9 EZE 201 B 1 HETATM 13 O O11 EZE . . . E 2 -37.364 -6.349 -20.865 0.5 36.69 ? O11 EZE 201 B 1 HETATM 14 C C12 EZE . . . E 2 -38.155 -5.043 -19.047 0.5 36.48 ? C12 EZE 201 B 1 HETATM 15 O O14 EZE . . . E 2 -38.962 -3.723 -17.245 0.5 37.69 ? O14 EZE 201 B 1 HETATM 16 C C16 EZE . . . E 2 -42.157 -1.026 -23.463 0.5 46.37 ? C16 EZE 201 B 1 HETATM 17 O O17 EZE . . . E 2 -41.446 -1.98 -24.123 0.5 47.2 ? O17 EZE 201 B 1 HETATM 18 C C18 EZE . . . E 2 -43.03 -0.218 -24.182 0.5 46.41 ? C18 EZE 201 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #