data_8W45 # _model_server_result.job_id E9kateVCvWaaVo1tgddvcQ _model_server_result.datetime_utc '2024-11-23 05:26:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8w45 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 8W45 # _exptl.entry_id 8W45 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8W45 _cell.length_a 43.401 _cell.length_b 84.371 _cell.length_c 63.229 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8W45 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -43.401 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 131 A ASP 99 1_555 D NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc2 D NA NA . A NA 202 1_555 G O HOH . A HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc3 D NA NA . A NA 202 1_555 G O HOH . A HOH 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc4 D NA NA . A NA 202 1_555 G O HOH . A HOH 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc5 D NA NA . A NA 202 1_555 G O HOH . A HOH 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc6 D NA NA . A NA 202 1_555 G O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc7 B O ASP 131 B ASP 99 1_555 E NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc8 E NA NA . B NA 201 1_555 H O HOH . B HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc9 E NA NA . B NA 201 1_555 H O HOH . B HOH 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc10 E NA NA . B NA 201 1_555 H O HOH . B HOH 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc11 E NA NA . B NA 201 1_555 H O HOH . B HOH 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8W45 _atom_sites.fract_transf_matrix[1][1] 0.023041 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011852 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015816 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 8KZ A 1 201 201 8KZ DRG . D 3 NA A 1 202 202 NA NA . E 3 NA B 1 201 203 NA NA . F 2 8KZ B 1 202 201 8KZ DRG . G 4 HOH A 1 301 184 HOH HOH . G 4 HOH A 2 302 172 HOH HOH . G 4 HOH A 3 303 22 HOH HOH . G 4 HOH A 4 304 73 HOH HOH . G 4 HOH A 5 305 147 HOH HOH . G 4 HOH A 6 306 221 HOH HOH . G 4 HOH A 7 307 131 HOH HOH . G 4 HOH A 8 308 75 HOH HOH . G 4 HOH A 9 309 180 HOH HOH . G 4 HOH A 10 310 113 HOH HOH . G 4 HOH A 11 311 182 HOH HOH . G 4 HOH A 12 312 20 HOH HOH . G 4 HOH A 13 313 66 HOH HOH . G 4 HOH A 14 314 218 HOH HOH . G 4 HOH A 15 315 59 HOH HOH . G 4 HOH A 16 316 1 HOH HOH . G 4 HOH A 17 317 194 HOH HOH . G 4 HOH A 18 318 195 HOH HOH . G 4 HOH A 19 319 25 HOH HOH . G 4 HOH A 20 320 213 HOH HOH . G 4 HOH A 21 321 17 HOH HOH . G 4 HOH A 22 322 14 HOH HOH . G 4 HOH A 23 323 161 HOH HOH . G 4 HOH A 24 324 9 HOH HOH . G 4 HOH A 25 325 27 HOH HOH . G 4 HOH A 26 326 129 HOH HOH . G 4 HOH A 27 327 90 HOH HOH . G 4 HOH A 28 328 177 HOH HOH . G 4 HOH A 29 329 38 HOH HOH . G 4 HOH A 30 330 71 HOH HOH . G 4 HOH A 31 331 107 HOH HOH . G 4 HOH A 32 332 132 HOH HOH . G 4 HOH A 33 333 60 HOH HOH . G 4 HOH A 34 334 6 HOH HOH . G 4 HOH A 35 335 74 HOH HOH . G 4 HOH A 36 336 78 HOH HOH . G 4 HOH A 37 337 51 HOH HOH . G 4 HOH A 38 338 145 HOH HOH . G 4 HOH A 39 339 4 HOH HOH . G 4 HOH A 40 340 7 HOH HOH . G 4 HOH A 41 341 171 HOH HOH . G 4 HOH A 42 342 118 HOH HOH . G 4 HOH A 43 343 189 HOH HOH . G 4 HOH A 44 344 114 HOH HOH . G 4 HOH A 45 345 61 HOH HOH . G 4 HOH A 46 346 102 HOH HOH . G 4 HOH A 47 347 52 HOH HOH . G 4 HOH A 48 348 136 HOH HOH . G 4 HOH A 49 349 40 HOH HOH . G 4 HOH A 50 350 81 HOH HOH . G 4 HOH A 51 351 150 HOH HOH . G 4 HOH A 52 352 141 HOH HOH . G 4 HOH A 53 353 215 HOH HOH . G 4 HOH A 54 354 120 HOH HOH . G 4 HOH A 55 355 103 HOH HOH . G 4 HOH A 56 356 21 HOH HOH . G 4 HOH A 57 357 201 HOH HOH . G 4 HOH A 58 358 196 HOH HOH . G 4 HOH A 59 359 32 HOH HOH . G 4 HOH A 60 360 199 HOH HOH . G 4 HOH A 61 361 31 HOH HOH . G 4 HOH A 62 362 164 HOH HOH . G 4 HOH A 63 363 130 HOH HOH . G 4 HOH A 64 364 45 HOH HOH . G 4 HOH A 65 365 163 HOH HOH . G 4 HOH A 66 366 155 HOH HOH . G 4 HOH A 67 367 212 HOH HOH . G 4 HOH A 68 368 135 HOH HOH . G 4 HOH A 69 369 140 HOH HOH . G 4 HOH A 70 370 48 HOH HOH . G 4 HOH A 71 371 167 HOH HOH . G 4 HOH A 72 372 156 HOH HOH . G 4 HOH A 73 373 185 HOH HOH . G 4 HOH A 74 374 178 HOH HOH . G 4 HOH A 75 375 77 HOH HOH . G 4 HOH A 76 376 146 HOH HOH . G 4 HOH A 77 377 99 HOH HOH . G 4 HOH A 78 378 82 HOH HOH . G 4 HOH A 79 379 95 HOH HOH . G 4 HOH A 80 380 128 HOH HOH . G 4 HOH A 81 381 157 HOH HOH . G 4 HOH A 82 382 89 HOH HOH . G 4 HOH A 83 383 127 HOH HOH . G 4 HOH A 84 384 133 HOH HOH . G 4 HOH A 85 385 159 HOH HOH . G 4 HOH A 86 386 54 HOH HOH . G 4 HOH A 87 387 50 HOH HOH . G 4 HOH A 88 388 34 HOH HOH . G 4 HOH A 89 389 205 HOH HOH . G 4 HOH A 90 390 91 HOH HOH . G 4 HOH A 91 391 86 HOH HOH . G 4 HOH A 92 392 198 HOH HOH . G 4 HOH A 93 393 206 HOH HOH . G 4 HOH A 94 394 153 HOH HOH . G 4 HOH A 95 395 193 HOH HOH . G 4 HOH A 96 396 93 HOH HOH . G 4 HOH A 97 397 225 HOH HOH . G 4 HOH A 98 398 119 HOH HOH . G 4 HOH A 99 399 202 HOH HOH . G 4 HOH A 100 400 211 HOH HOH . G 4 HOH A 101 401 139 HOH HOH . G 4 HOH A 102 402 154 HOH HOH . G 4 HOH A 103 403 200 HOH HOH . G 4 HOH A 104 404 97 HOH HOH . G 4 HOH A 105 405 216 HOH HOH . G 4 HOH A 106 406 179 HOH HOH . G 4 HOH A 107 407 204 HOH HOH . H 4 HOH B 1 301 183 HOH HOH . H 4 HOH B 2 302 192 HOH HOH . H 4 HOH B 3 303 158 HOH HOH . H 4 HOH B 4 304 220 HOH HOH . H 4 HOH B 5 305 83 HOH HOH . H 4 HOH B 6 306 117 HOH HOH . H 4 HOH B 7 307 101 HOH HOH . H 4 HOH B 8 308 68 HOH HOH . H 4 HOH B 9 309 124 HOH HOH . H 4 HOH B 10 310 72 HOH HOH . H 4 HOH B 11 311 84 HOH HOH . H 4 HOH B 12 312 87 HOH HOH . H 4 HOH B 13 313 53 HOH HOH . H 4 HOH B 14 314 30 HOH HOH . H 4 HOH B 15 315 29 HOH HOH . H 4 HOH B 16 316 191 HOH HOH . H 4 HOH B 17 317 181 HOH HOH . H 4 HOH B 18 318 28 HOH HOH . H 4 HOH B 19 319 13 HOH HOH . H 4 HOH B 20 320 18 HOH HOH . H 4 HOH B 21 321 151 HOH HOH . H 4 HOH B 22 322 19 HOH HOH . H 4 HOH B 23 323 109 HOH HOH . H 4 HOH B 24 324 3 HOH HOH . H 4 HOH B 25 325 152 HOH HOH . H 4 HOH B 26 326 169 HOH HOH . H 4 HOH B 27 327 62 HOH HOH . H 4 HOH B 28 328 208 HOH HOH . H 4 HOH B 29 329 12 HOH HOH . H 4 HOH B 30 330 80 HOH HOH . H 4 HOH B 31 331 10 HOH HOH . H 4 HOH B 32 332 43 HOH HOH . H 4 HOH B 33 333 92 HOH HOH . H 4 HOH B 34 334 5 HOH HOH . H 4 HOH B 35 335 44 HOH HOH . H 4 HOH B 36 336 142 HOH HOH . H 4 HOH B 37 337 173 HOH HOH . H 4 HOH B 38 338 58 HOH HOH . H 4 HOH B 39 339 11 HOH HOH . H 4 HOH B 40 340 24 HOH HOH . H 4 HOH B 41 341 16 HOH HOH . H 4 HOH B 42 342 37 HOH HOH . H 4 HOH B 43 343 65 HOH HOH . H 4 HOH B 44 344 170 HOH HOH . H 4 HOH B 45 345 217 HOH HOH . H 4 HOH B 46 346 8 HOH HOH . H 4 HOH B 47 347 26 HOH HOH . H 4 HOH B 48 348 126 HOH HOH . H 4 HOH B 49 349 85 HOH HOH . H 4 HOH B 50 350 148 HOH HOH . H 4 HOH B 51 351 36 HOH HOH . H 4 HOH B 52 352 100 HOH HOH . H 4 HOH B 53 353 105 HOH HOH . H 4 HOH B 54 354 33 HOH HOH . H 4 HOH B 55 355 209 HOH HOH . H 4 HOH B 56 356 15 HOH HOH . H 4 HOH B 57 357 55 HOH HOH . H 4 HOH B 58 358 2 HOH HOH . H 4 HOH B 59 359 47 HOH HOH . H 4 HOH B 60 360 138 HOH HOH . H 4 HOH B 61 361 35 HOH HOH . H 4 HOH B 62 362 106 HOH HOH . H 4 HOH B 63 363 56 HOH HOH . H 4 HOH B 64 364 39 HOH HOH . H 4 HOH B 65 365 70 HOH HOH . H 4 HOH B 66 366 76 HOH HOH . H 4 HOH B 67 367 166 HOH HOH . H 4 HOH B 68 368 188 HOH HOH . H 4 HOH B 69 369 23 HOH HOH . H 4 HOH B 70 370 165 HOH HOH . H 4 HOH B 71 371 121 HOH HOH . H 4 HOH B 72 372 174 HOH HOH . H 4 HOH B 73 373 197 HOH HOH . H 4 HOH B 74 374 49 HOH HOH . H 4 HOH B 75 375 190 HOH HOH . H 4 HOH B 76 376 122 HOH HOH . H 4 HOH B 77 377 187 HOH HOH . H 4 HOH B 78 378 88 HOH HOH . H 4 HOH B 79 379 104 HOH HOH . H 4 HOH B 80 380 98 HOH HOH . H 4 HOH B 81 381 41 HOH HOH . H 4 HOH B 82 382 143 HOH HOH . H 4 HOH B 83 383 210 HOH HOH . H 4 HOH B 84 384 79 HOH HOH . H 4 HOH B 85 385 115 HOH HOH . H 4 HOH B 86 386 186 HOH HOH . H 4 HOH B 87 387 207 HOH HOH . H 4 HOH B 88 388 149 HOH HOH . H 4 HOH B 89 389 168 HOH HOH . H 4 HOH B 90 390 144 HOH HOH . H 4 HOH B 91 391 63 HOH HOH . H 4 HOH B 92 392 134 HOH HOH . H 4 HOH B 93 393 94 HOH HOH . H 4 HOH B 94 394 96 HOH HOH . H 4 HOH B 95 395 46 HOH HOH . H 4 HOH B 96 396 57 HOH HOH . H 4 HOH B 97 397 108 HOH HOH . H 4 HOH B 98 398 42 HOH HOH . H 4 HOH B 99 399 67 HOH HOH . H 4 HOH B 100 400 125 HOH HOH . H 4 HOH B 101 401 112 HOH HOH . H 4 HOH B 102 402 110 HOH HOH . H 4 HOH B 103 403 219 HOH HOH . H 4 HOH B 104 404 223 HOH HOH . H 4 HOH B 105 405 137 HOH HOH . H 4 HOH B 106 406 69 HOH HOH . H 4 HOH B 107 407 123 HOH HOH . H 4 HOH B 108 408 116 HOH HOH . H 4 HOH B 109 409 111 HOH HOH . H 4 HOH B 110 410 224 HOH HOH . H 4 HOH B 111 411 64 HOH HOH . H 4 HOH B 112 412 203 HOH HOH . H 4 HOH B 113 413 175 HOH HOH . H 4 HOH B 114 414 222 HOH HOH . H 4 HOH B 115 415 214 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -2.28 _atom_site.Cartn_y 19.838 _atom_site.Cartn_z -26.252 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.29 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #