data_8W47
#
_model_server_result.job_id            SKw3D0SjiqheIZvETzyl-Q 
_model_server_result.datetime_utc      '2024-11-18 12:38:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8w47 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":202}' 
#
_entry.id    8W47 
#
_exptl.entry_id    8W47 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8W47 
_cell.length_a            43.319 
_cell.length_b            84.15 
_cell.length_c            63.201 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8W47 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H 1 1 
A,B,C,D,E,F,G,H 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -43.319 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASP 131 A ASP 99 1_555 D NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc2 D NA NA . A NA 202 1_555 G O HOH . A HOH 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc3 D NA NA . A NA 202 1_555 G O HOH . A HOH 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc4 B O ASP 131 B ASP 99 1_555 F NA NA . B NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? 
metalc ? metalc5 B OD2 ASP 131 B ASP 99 1_555 F NA NA . B NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? 
metalc ? metalc6 F NA NA . B NA 202 1_555 H O HOH . B HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? 
metalc ? metalc7 F NA NA . B NA 202 1_555 H O HOH . B HOH 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? 
metalc ? metalc8 F NA NA . B NA 202 1_555 H O HOH . B HOH 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? 
metalc ? metalc9 F NA NA . B NA 202 1_555 H O HOH . B HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8W47 
_atom_sites.fract_transf_matrix[1][1]    0.023085 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011884 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015823 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 P5O A 1 201 200 P5O DRG . 
D 3 NA A 1 202 1 NA NA . 
E 2 P5O B 1 201 200 P5O DRG . 
F 3 NA B 1 202 1 NA NA . 
G 4 HOH A 1 301 81 HOH HOH . 
G 4 HOH A 2 302 151 HOH HOH . 
G 4 HOH A 3 303 84 HOH HOH . 
G 4 HOH A 4 304 18 HOH HOH . 
G 4 HOH A 5 305 172 HOH HOH . 
G 4 HOH A 6 306 174 HOH HOH . 
G 4 HOH A 7 307 155 HOH HOH . 
G 4 HOH A 8 308 71 HOH HOH . 
G 4 HOH A 9 309 4 HOH HOH . 
G 4 HOH A 10 310 25 HOH HOH . 
G 4 HOH A 11 311 99 HOH HOH . 
G 4 HOH A 12 312 143 HOH HOH . 
G 4 HOH A 13 313 66 HOH HOH . 
G 4 HOH A 14 314 192 HOH HOH . 
G 4 HOH A 15 315 2 HOH HOH . 
G 4 HOH A 16 316 177 HOH HOH . 
G 4 HOH A 17 317 37 HOH HOH . 
G 4 HOH A 18 318 146 HOH HOH . 
G 4 HOH A 19 319 85 HOH HOH . 
G 4 HOH A 20 320 5 HOH HOH . 
G 4 HOH A 21 321 15 HOH HOH . 
G 4 HOH A 22 322 22 HOH HOH . 
G 4 HOH A 23 323 16 HOH HOH . 
G 4 HOH A 24 324 67 HOH HOH . 
G 4 HOH A 25 325 50 HOH HOH . 
G 4 HOH A 26 326 144 HOH HOH . 
G 4 HOH A 27 327 54 HOH HOH . 
G 4 HOH A 28 328 6 HOH HOH . 
G 4 HOH A 29 329 178 HOH HOH . 
G 4 HOH A 30 330 14 HOH HOH . 
G 4 HOH A 31 331 19 HOH HOH . 
G 4 HOH A 32 332 34 HOH HOH . 
G 4 HOH A 33 333 179 HOH HOH . 
G 4 HOH A 34 334 13 HOH HOH . 
G 4 HOH A 35 335 64 HOH HOH . 
G 4 HOH A 36 336 72 HOH HOH . 
G 4 HOH A 37 337 58 HOH HOH . 
G 4 HOH A 38 338 68 HOH HOH . 
G 4 HOH A 39 339 135 HOH HOH . 
G 4 HOH A 40 340 180 HOH HOH . 
G 4 HOH A 41 341 168 HOH HOH . 
G 4 HOH A 42 342 97 HOH HOH . 
G 4 HOH A 43 343 32 HOH HOH . 
G 4 HOH A 44 344 141 HOH HOH . 
G 4 HOH A 45 345 148 HOH HOH . 
G 4 HOH A 46 346 119 HOH HOH . 
G 4 HOH A 47 347 140 HOH HOH . 
G 4 HOH A 48 348 61 HOH HOH . 
G 4 HOH A 49 349 129 HOH HOH . 
G 4 HOH A 50 350 23 HOH HOH . 
G 4 HOH A 51 351 186 HOH HOH . 
G 4 HOH A 52 352 166 HOH HOH . 
G 4 HOH A 53 353 137 HOH HOH . 
G 4 HOH A 54 354 27 HOH HOH . 
G 4 HOH A 55 355 142 HOH HOH . 
G 4 HOH A 56 356 170 HOH HOH . 
G 4 HOH A 57 357 128 HOH HOH . 
G 4 HOH A 58 358 190 HOH HOH . 
G 4 HOH A 59 359 198 HOH HOH . 
G 4 HOH A 60 360 87 HOH HOH . 
G 4 HOH A 61 361 35 HOH HOH . 
G 4 HOH A 62 362 162 HOH HOH . 
G 4 HOH A 63 363 76 HOH HOH . 
G 4 HOH A 64 364 132 HOH HOH . 
G 4 HOH A 65 365 45 HOH HOH . 
G 4 HOH A 66 366 116 HOH HOH . 
G 4 HOH A 67 367 160 HOH HOH . 
G 4 HOH A 68 368 83 HOH HOH . 
G 4 HOH A 69 369 175 HOH HOH . 
G 4 HOH A 70 370 78 HOH HOH . 
G 4 HOH A 71 371 115 HOH HOH . 
G 4 HOH A 72 372 93 HOH HOH . 
G 4 HOH A 73 373 92 HOH HOH . 
G 4 HOH A 74 374 94 HOH HOH . 
G 4 HOH A 75 375 107 HOH HOH . 
G 4 HOH A 76 376 49 HOH HOH . 
G 4 HOH A 77 377 106 HOH HOH . 
G 4 HOH A 78 378 90 HOH HOH . 
G 4 HOH A 79 379 112 HOH HOH . 
G 4 HOH A 80 380 196 HOH HOH . 
G 4 HOH A 81 381 121 HOH HOH . 
G 4 HOH A 82 382 105 HOH HOH . 
G 4 HOH A 83 383 191 HOH HOH . 
G 4 HOH A 84 384 167 HOH HOH . 
G 4 HOH A 85 385 98 HOH HOH . 
G 4 HOH A 86 386 43 HOH HOH . 
G 4 HOH A 87 387 126 HOH HOH . 
H 4 HOH B 1 301 139 HOH HOH . 
H 4 HOH B 2 302 77 HOH HOH . 
H 4 HOH B 3 303 181 HOH HOH . 
H 4 HOH B 4 304 147 HOH HOH . 
H 4 HOH B 5 305 133 HOH HOH . 
H 4 HOH B 6 306 130 HOH HOH . 
H 4 HOH B 7 307 48 HOH HOH . 
H 4 HOH B 8 308 176 HOH HOH . 
H 4 HOH B 9 309 69 HOH HOH . 
H 4 HOH B 10 310 159 HOH HOH . 
H 4 HOH B 11 311 70 HOH HOH . 
H 4 HOH B 12 312 24 HOH HOH . 
H 4 HOH B 13 313 36 HOH HOH . 
H 4 HOH B 14 314 26 HOH HOH . 
H 4 HOH B 15 315 104 HOH HOH . 
H 4 HOH B 16 316 63 HOH HOH . 
H 4 HOH B 17 317 100 HOH HOH . 
H 4 HOH B 18 318 203 HOH HOH . 
H 4 HOH B 19 319 145 HOH HOH . 
H 4 HOH B 20 320 53 HOH HOH . 
H 4 HOH B 21 321 163 HOH HOH . 
H 4 HOH B 22 322 89 HOH HOH . 
H 4 HOH B 23 323 7 HOH HOH . 
H 4 HOH B 24 324 125 HOH HOH . 
H 4 HOH B 25 325 42 HOH HOH . 
H 4 HOH B 26 326 29 HOH HOH . 
H 4 HOH B 27 327 11 HOH HOH . 
H 4 HOH B 28 328 44 HOH HOH . 
H 4 HOH B 29 329 3 HOH HOH . 
H 4 HOH B 30 330 194 HOH HOH . 
H 4 HOH B 31 331 156 HOH HOH . 
H 4 HOH B 32 332 28 HOH HOH . 
H 4 HOH B 33 333 8 HOH HOH . 
H 4 HOH B 34 334 10 HOH HOH . 
H 4 HOH B 35 335 202 HOH HOH . 
H 4 HOH B 36 336 200 HOH HOH . 
H 4 HOH B 37 337 30 HOH HOH . 
H 4 HOH B 38 338 73 HOH HOH . 
H 4 HOH B 39 339 153 HOH HOH . 
H 4 HOH B 40 340 9 HOH HOH . 
H 4 HOH B 41 341 62 HOH HOH . 
H 4 HOH B 42 342 131 HOH HOH . 
H 4 HOH B 43 343 1 HOH HOH . 
H 4 HOH B 44 344 184 HOH HOH . 
H 4 HOH B 45 345 79 HOH HOH . 
H 4 HOH B 46 346 17 HOH HOH . 
H 4 HOH B 47 347 52 HOH HOH . 
H 4 HOH B 48 348 136 HOH HOH . 
H 4 HOH B 49 349 39 HOH HOH . 
H 4 HOH B 50 350 150 HOH HOH . 
H 4 HOH B 51 351 21 HOH HOH . 
H 4 HOH B 52 352 57 HOH HOH . 
H 4 HOH B 53 353 40 HOH HOH . 
H 4 HOH B 54 354 31 HOH HOH . 
H 4 HOH B 55 355 38 HOH HOH . 
H 4 HOH B 56 356 165 HOH HOH . 
H 4 HOH B 57 357 47 HOH HOH . 
H 4 HOH B 58 358 12 HOH HOH . 
H 4 HOH B 59 359 82 HOH HOH . 
H 4 HOH B 60 360 103 HOH HOH . 
H 4 HOH B 61 361 110 HOH HOH . 
H 4 HOH B 62 362 56 HOH HOH . 
H 4 HOH B 63 363 164 HOH HOH . 
H 4 HOH B 64 364 65 HOH HOH . 
H 4 HOH B 65 365 55 HOH HOH . 
H 4 HOH B 66 366 33 HOH HOH . 
H 4 HOH B 67 367 75 HOH HOH . 
H 4 HOH B 68 368 74 HOH HOH . 
H 4 HOH B 69 369 95 HOH HOH . 
H 4 HOH B 70 370 157 HOH HOH . 
H 4 HOH B 71 371 86 HOH HOH . 
H 4 HOH B 72 372 20 HOH HOH . 
H 4 HOH B 73 373 46 HOH HOH . 
H 4 HOH B 74 374 195 HOH HOH . 
H 4 HOH B 75 375 134 HOH HOH . 
H 4 HOH B 76 376 182 HOH HOH . 
H 4 HOH B 77 377 101 HOH HOH . 
H 4 HOH B 78 378 41 HOH HOH . 
H 4 HOH B 79 379 88 HOH HOH . 
H 4 HOH B 80 380 122 HOH HOH . 
H 4 HOH B 81 381 188 HOH HOH . 
H 4 HOH B 82 382 118 HOH HOH . 
H 4 HOH B 83 383 154 HOH HOH . 
H 4 HOH B 84 384 60 HOH HOH . 
H 4 HOH B 85 385 158 HOH HOH . 
H 4 HOH B 86 386 102 HOH HOH . 
H 4 HOH B 87 387 113 HOH HOH . 
H 4 HOH B 88 388 123 HOH HOH . 
H 4 HOH B 89 389 117 HOH HOH . 
H 4 HOH B 90 390 197 HOH HOH . 
H 4 HOH B 91 391 109 HOH HOH . 
H 4 HOH B 92 392 138 HOH HOH . 
H 4 HOH B 93 393 108 HOH HOH . 
H 4 HOH B 94 394 120 HOH HOH . 
H 4 HOH B 95 395 169 HOH HOH . 
H 4 HOH B 96 396 152 HOH HOH . 
H 4 HOH B 97 397 91 HOH HOH . 
H 4 HOH B 98 398 96 HOH HOH . 
H 4 HOH B 99 399 127 HOH HOH . 
H 4 HOH B 100 400 161 HOH HOH . 
H 4 HOH B 101 401 80 HOH HOH . 
H 4 HOH B 102 402 51 HOH HOH . 
H 4 HOH B 103 403 185 HOH HOH . 
H 4 HOH B 104 404 59 HOH HOH . 
H 4 HOH B 105 405 114 HOH HOH . 
H 4 HOH B 106 406 111 HOH HOH . 
H 4 HOH B 107 407 193 HOH HOH . 
H 4 HOH B 108 408 124 HOH HOH . 
H 4 HOH B 109 409 189 HOH HOH . 
H 4 HOH B 110 410 199 HOH HOH . 
H 4 HOH B 111 411 173 HOH HOH . 
H 4 HOH B 112 412 183 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -2.255 
_atom_site.Cartn_y               19.691 
_atom_site.Cartn_z               -26.231 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        32.63 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           202 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#