data_8W6E # _model_server_result.job_id FNYA7bfSxg22ARhTAvoI2w _model_server_result.datetime_utc '2025-08-08 21:47:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8w6e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 8W6E # _exptl.entry_id 8W6E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 359.444 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(Z)-1-cyano-2-{6-[(2-hydroxyethyl)(methyl)amino]-1-benzothiophen-2-yl}ethenyl]benzonitrile _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.791 _cell.angle_gamma 90 _cell.entry_id 8W6E _cell.length_a 40.557 _cell.length_b 91.912 _cell.length_c 52.198 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8W6E _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C21 H17 N3 O S' _chem_comp.formula_weight 359.444 _chem_comp.id KY6 _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(Z)-1-cyano-2-{6-[(2-hydroxyethyl)(methyl)amino]-1-benzothiophen-2-yl}ethenyl]benzonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C08 C07 KY6 doub 141 n y C08 C09 KY6 sing 142 n y C07 C06 KY6 sing 143 n y C10 C09 KY6 sing 144 n y C10 C11 KY6 doub 145 n y C09 C25 KY6 doub 146 n y C06 N02 KY6 sing 147 n n C06 C26 KY6 doub 148 n y N02 C01 KY6 sing 149 n n N02 C03 KY6 sing 150 n n C11 C12 KY6 sing 151 n n C11 S24 KY6 sing 152 n y C12 C13 KY6 doub 153 z n C03 C04 KY6 sing 154 n n C25 C26 KY6 sing 155 n y C25 S24 KY6 sing 156 n y C17 C18 KY6 doub 157 n y C17 C16 KY6 sing 158 n y C18 C19 KY6 sing 159 n y C16 C13 KY6 sing 160 n n C16 C23 KY6 doub 161 n y C13 C14 KY6 sing 162 n n C19 C20 KY6 sing 163 n n C19 C22 KY6 doub 164 n y C20 N21 KY6 trip 165 n n C23 C22 KY6 sing 166 n y C04 O05 KY6 sing 167 n n C14 N15 KY6 trip 168 n n C10 H101 KY6 sing 169 n n C12 H121 KY6 sing 170 n n C17 H171 KY6 sing 171 n n C18 H181 KY6 sing 172 n n C01 H013 KY6 sing 173 n n C01 H012 KY6 sing 174 n n C01 H011 KY6 sing 175 n n C03 H032 KY6 sing 176 n n C03 H031 KY6 sing 177 n n C04 H041 KY6 sing 178 n n C04 H042 KY6 sing 179 n n C07 H071 KY6 sing 180 n n C08 H081 KY6 sing 181 n n C22 H221 KY6 sing 182 n n C23 H231 KY6 sing 183 n n C26 H261 KY6 sing 184 n n O05 H051 KY6 sing 185 n n # _atom_sites.entry_id 8W6E _atom_sites.fract_transf_matrix[1][1] 0.024657 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007912 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01088 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02012 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 KY6 A 1 201 201 KY6 LIG . D 2 KY6 B 1 201 201 KY6 LIG . E 3 HOH A 1 301 2 HOH HOH . E 3 HOH A 2 302 17 HOH HOH . E 3 HOH A 3 303 16 HOH HOH . E 3 HOH A 4 304 23 HOH HOH . E 3 HOH A 5 305 20 HOH HOH . E 3 HOH A 6 306 4 HOH HOH . E 3 HOH A 7 307 24 HOH HOH . E 3 HOH A 8 308 18 HOH HOH . E 3 HOH A 9 309 6 HOH HOH . E 3 HOH A 10 310 30 HOH HOH . E 3 HOH A 11 311 25 HOH HOH . E 3 HOH A 12 312 9 HOH HOH . E 3 HOH A 13 313 26 HOH HOH . E 3 HOH A 14 314 3 HOH HOH . E 3 HOH A 15 315 1 HOH HOH . E 3 HOH A 16 316 5 HOH HOH . E 3 HOH A 17 317 19 HOH HOH . E 3 HOH A 18 318 10 HOH HOH . E 3 HOH A 19 319 11 HOH HOH . E 3 HOH A 20 320 22 HOH HOH . E 3 HOH A 21 321 21 HOH HOH . E 3 HOH A 22 322 15 HOH HOH . F 3 HOH B 1 301 14 HOH HOH . F 3 HOH B 2 302 27 HOH HOH . F 3 HOH B 3 303 28 HOH HOH . F 3 HOH B 4 304 29 HOH HOH . F 3 HOH B 5 305 8 HOH HOH . F 3 HOH B 6 306 7 HOH HOH . F 3 HOH B 7 307 31 HOH HOH . F 3 HOH B 8 308 12 HOH HOH . F 3 HOH B 9 309 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 KY6 . . . C 2 0.881 6.536 24.902 1 51.74 ? C10 KY6 201 A 1 HETATM 2 C C11 KY6 . . . C 2 -0.265 6.947 24.282 1 42.19 ? C11 KY6 201 A 1 HETATM 3 C C12 KY6 . . . C 2 -1.093 8.017 24.811 1 27.69 ? C12 KY6 201 A 1 HETATM 4 C C13 KY6 . . . C 2 -2.184 8.656 24.302 1 38.96 ? C13 KY6 201 A 1 HETATM 5 C C14 KY6 . . . C 2 -2.664 8.234 23.016 1 48.98 ? C14 KY6 201 A 1 HETATM 6 C C16 KY6 . . . C 2 -2.967 9.751 24.964 1 43.87 ? C16 KY6 201 A 1 HETATM 7 C C17 KY6 . . . C 2 -4.037 10.387 24.325 1 29.41 ? C17 KY6 201 A 1 HETATM 8 C C18 KY6 . . . C 2 -4.754 11.402 24.944 1 38.67 ? C18 KY6 201 A 1 HETATM 9 C C19 KY6 . . . C 2 -4.458 11.76 26.25 1 40.51 ? C19 KY6 201 A 1 HETATM 10 C C20 KY6 . . . C 2 -5.201 12.814 26.897 1 36.44 ? C20 KY6 201 A 1 HETATM 11 C C01 KY6 . . . C 2 2.573 2.347 20.246 1 51.3 ? C01 KY6 201 A 1 HETATM 12 C C03 KY6 . . . C 2 4.57 2.058 21.749 1 47.13 ? C03 KY6 201 A 1 HETATM 13 C C04 KY6 . . . C 2 4.394 0.824 22.652 1 48.03 ? C04 KY6 201 A 1 HETATM 14 C C06 KY6 . . . C 2 2.734 3.679 22.373 1 35.5 ? C06 KY6 201 A 1 HETATM 15 C C07 KY6 . . . C 2 3.404 4.051 23.57 1 53.59 ? C07 KY6 201 A 1 HETATM 16 C C08 KY6 . . . C 2 2.855 4.981 24.446 1 50.6 ? C08 KY6 201 A 1 HETATM 17 C C09 KY6 . . . C 2 1.617 5.567 24.136 1 49.7 ? C09 KY6 201 A 1 HETATM 18 C C22 KY6 . . . C 2 -3.439 11.116 26.925 1 40.86 ? C22 KY6 201 A 1 HETATM 19 C C23 KY6 . . . C 2 -2.722 10.114 26.293 1 49.19 ? C23 KY6 201 A 1 HETATM 20 C C25 KY6 . . . C 2 0.954 5.207 22.962 1 42.27 ? C25 KY6 201 A 1 HETATM 21 C C26 KY6 . . . C 2 1.484 4.286 22.073 1 39.5 ? C26 KY6 201 A 1 HETATM 22 N N02 KY6 . . . C 2 3.291 2.743 21.491 1 43.63 ? N02 KY6 201 A 1 HETATM 23 N N15 KY6 . . . C 2 -3.065 7.877 22.005 1 35.41 ? N15 KY6 201 A 1 HETATM 24 N N21 KY6 . . . C 2 -5.761 13.683 27.372 1 38.71 ? N21 KY6 201 A 1 HETATM 25 O O05 KY6 . . . C 2 5.605 0.063 22.796 1 70.13 ? O05 KY6 201 A 1 HETATM 26 S S24 KY6 . . . C 2 -0.545 6.057 22.805 1 34.68 ? S24 KY6 201 A 1 HETATM 27 H H101 KY6 . . . C 2 1.16 6.845 25.753 1 62.09 ? H101 KY6 201 A 1 HETATM 28 H H121 KY6 . . . C 2 -0.802 8.32 25.653 1 33.22 ? H121 KY6 201 A 1 HETATM 29 H H171 KY6 . . . C 2 -4.238 10.178 23.425 1 35.3 ? H171 KY6 201 A 1 HETATM 30 H H181 KY6 . . . C 2 -5.456 11.851 24.48 1 46.41 ? H181 KY6 201 A 1 HETATM 31 H H013 KY6 . . . C 2 2.457 3.124 19.671 1 61.56 ? H013 KY6 201 A 1 HETATM 32 H H012 KY6 . . . C 2 3.072 1.67 19.75 1 61.56 ? H012 KY6 201 A 1 HETATM 33 H H011 KY6 . . . C 2 1.705 1.979 20.474 1 61.56 ? H011 KY6 201 A 1 HETATM 34 H H032 KY6 . . . C 2 4.972 1.776 20.893 1 56.56 ? H032 KY6 201 A 1 HETATM 35 H H031 KY6 . . . C 2 5.222 2.678 22.143 1 56.56 ? H031 KY6 201 A 1 HETATM 36 H H041 KY6 . . . C 2 3.689 0.24 22.289 1 57.63 ? H041 KY6 201 A 1 HETATM 37 H H042 KY6 . . . C 2 4.098 1.104 23.545 1 57.63 ? H042 KY6 201 A 1 HETATM 38 H H071 KY6 . . . C 2 4.234 3.658 23.785 1 64.31 ? H071 KY6 201 A 1 HETATM 39 H H081 KY6 . . . C 2 3.303 5.224 25.254 1 60.72 ? H081 KY6 201 A 1 HETATM 40 H H221 KY6 . . . C 2 -3.233 11.361 27.824 1 49.03 ? H221 KY6 201 A 1 HETATM 41 H H231 KY6 . . . C 2 -2.02 9.685 26.766 1 59.03 ? H231 KY6 201 A 1 HETATM 42 H H261 KY6 . . . C 2 0.998 4.076 21.296 1 47.4 ? H261 KY6 201 A 1 HETATM 43 H H051 KY6 . . . C 2 6.1 -0.016 22.098 1 84.15 ? H051 KY6 201 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #