data_8W75 # _model_server_result.job_id 4zCVUEkG4xABya1wbNIrrw _model_server_result.datetime_utc '2024-11-07 13:44:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8w75 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":502}' # _entry.id 8W75 # _exptl.entry_id 8W75 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.61 _cell.angle_gamma 90 _cell.entry_id 8W75 _cell.length_a 100.115 _cell.length_b 103.178 _cell.length_c 102.538 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8W75 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 37 D CYS 77 1_555 D SG CYS 37 C CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf2 B SG CYS 37 A CYS 77 1_555 C SG CYS 37 B CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 283 n n C1B O1B LMT sing 284 n n C1B O5B LMT sing 285 n n C1B H1B LMT sing 286 n n C2B C3B LMT sing 287 n n C2B O2B LMT sing 288 n n C2B H2B LMT sing 289 n n C3B C4B LMT sing 290 n n C3B O3B LMT sing 291 n n C3B H3B LMT sing 292 n n C4B C5B LMT sing 293 n n C4B O4' LMT sing 294 n n C4B H4B LMT sing 295 n n C5B C6B LMT sing 296 n n C5B O5B LMT sing 297 n n C5B H5B LMT sing 298 n n C6B O6B LMT sing 299 n n C6B "H6'2" LMT sing 300 n n C6B "H6'1" LMT sing 301 n n O1B C4' LMT sing 302 n n O2B H2O1 LMT sing 303 n n O3B H3O1 LMT sing 304 n n O4' H4O1 LMT sing 305 n n O6B H6B LMT sing 306 n n C1' C2' LMT sing 307 n n C1' O1' LMT sing 308 n n C1' O5' LMT sing 309 n n C1' H1' LMT sing 310 n n C2' C3' LMT sing 311 n n C2' O2' LMT sing 312 n n C2' H2' LMT sing 313 n n C3' C4' LMT sing 314 n n C3' O3' LMT sing 315 n n C3' H3' LMT sing 316 n n C4' C5' LMT sing 317 n n C4' H4' LMT sing 318 n n C5' C6' LMT sing 319 n n C5' O5' LMT sing 320 n n C5' H5' LMT sing 321 n n C6' O6' LMT sing 322 n n C6' H6D LMT sing 323 n n C6' H6E LMT sing 324 n n O1' C1 LMT sing 325 n n O2' H2O2 LMT sing 326 n n O3' H3O2 LMT sing 327 n n O6' H6' LMT sing 328 n n C1 C2 LMT sing 329 n n C1 H12 LMT sing 330 n n C1 H11 LMT sing 331 n n C2 C3 LMT sing 332 n n C2 H22 LMT sing 333 n n C2 H21 LMT sing 334 n n C3 C4 LMT sing 335 n n C3 H32 LMT sing 336 n n C3 H31 LMT sing 337 n n C4 C5 LMT sing 338 n n C4 H42 LMT sing 339 n n C4 H41 LMT sing 340 n n C5 C6 LMT sing 341 n n C5 H52 LMT sing 342 n n C5 H51 LMT sing 343 n n C6 C7 LMT sing 344 n n C6 H62 LMT sing 345 n n C6 H61 LMT sing 346 n n C7 C8 LMT sing 347 n n C7 H72 LMT sing 348 n n C7 H71 LMT sing 349 n n C8 C9 LMT sing 350 n n C8 H82 LMT sing 351 n n C8 H81 LMT sing 352 n n C9 C10 LMT sing 353 n n C9 H92 LMT sing 354 n n C9 H91 LMT sing 355 n n C10 C11 LMT sing 356 n n C10 H102 LMT sing 357 n n C10 H101 LMT sing 358 n n C11 C12 LMT sing 359 n n C11 H112 LMT sing 360 n n C11 H111 LMT sing 361 n n C12 H123 LMT sing 362 n n C12 H122 LMT sing 363 n n C12 H121 LMT sing 364 n n # _atom_sites.entry_id 8W75 _atom_sites.fract_transf_matrix[1][1] 0.009989 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003364 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009692 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD D 1 501 501 FAD FAD . F 3 LMT D 1 502 701 LMT LMT . G 2 FAD A 1 501 501 FAD FAD . H 3 LMT A 1 502 701 LMT LMT . I 2 FAD B 1 501 501 FAD FAD . J 3 LMT B 1 502 701 LMT LMT . K 2 FAD C 1 501 501 FAD FAD . L 3 LMT C 1 502 701 LMT LMT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . L 3 -7.511 40.588 -25.601 1 76.15 ? C1B LMT 502 C 1 HETATM 2 C C2B LMT . . . L 3 -8.67 41.511 -26.032 1 76.78 ? C2B LMT 502 C 1 HETATM 3 C C3B LMT . . . L 3 -9.283 41.045 -27.369 1 76.85 ? C3B LMT 502 C 1 HETATM 4 C C4B LMT . . . L 3 -8.179 40.805 -28.425 1 77.44 ? C4B LMT 502 C 1 HETATM 5 C C5B LMT . . . L 3 -7.15 39.852 -27.801 1 76.6 ? C5B LMT 502 C 1 HETATM 6 C C6B LMT . . . L 3 -6.062 39.519 -28.815 1 76.73 ? C6B LMT 502 C 1 HETATM 7 O O1B LMT . . . L 3 -8.028 39.37 -25.173 1 74.75 ? O1B LMT 502 C 1 HETATM 8 O O2B LMT . . . L 3 -9.607 41.472 -25.031 1 76.03 ? O2B LMT 502 C 1 HETATM 9 O O3B LMT . . . L 3 -10.247 41.914 -27.811 1 77.38 ? O3B LMT 502 C 1 HETATM 10 O O4' LMT . . . L 3 -8.705 40.23 -29.555 1 77.53 ? O4' LMT 502 C 1 HETATM 11 O O5B LMT . . . L 3 -6.59 40.391 -26.632 1 76.72 ? O5B LMT 502 C 1 HETATM 12 O O6B LMT . . . L 3 -5.115 38.71 -28.24 1 75.78 ? O6B LMT 502 C 1 HETATM 13 C C1' LMT . . . L 3 -7.253 36.481 -22.31 1 70.37 ? C1' LMT 502 C 1 HETATM 14 C C2' LMT . . . L 3 -7.299 37.93 -21.783 1 71.62 ? C2' LMT 502 C 1 HETATM 15 C C3' LMT . . . L 3 -7.97 38.849 -22.837 1 72.72 ? C3' LMT 502 C 1 HETATM 16 C C4' LMT . . . L 3 -7.286 38.672 -24.201 1 73.64 ? C4' LMT 502 C 1 HETATM 17 C C5' LMT . . . L 3 -7.389 37.16 -24.488 1 72.32 ? C5' LMT 502 C 1 HETATM 18 C C6' LMT . . . L 3 -7.032 36.75 -25.892 1 72.95 ? C6' LMT 502 C 1 HETATM 19 O O1' LMT . . . L 3 -6.53 35.684 -21.469 1 68.96 ? O1' LMT 502 C 1 HETATM 20 O O2' LMT . . . L 3 -8.053 37.948 -20.638 1 70.95 ? O2' LMT 502 C 1 HETATM 21 O O3' LMT . . . L 3 -7.925 40.152 -22.447 1 73.62 ? O3' LMT 502 C 1 HETATM 22 O O5' LMT . . . L 3 -6.602 36.455 -23.57 1 71.43 ? O5' LMT 502 C 1 HETATM 23 O O6' LMT . . . L 3 -5.729 37.127 -26.08 1 73.82 ? O6' LMT 502 C 1 HETATM 24 C C1 LMT . . . L 3 -6.756 34.301 -21.629 1 66.99 ? C1 LMT 502 C 1 HETATM 25 C C2 LMT . . . L 3 -8.229 34.109 -21.409 1 65.03 ? C2 LMT 502 C 1 HETATM 26 C C3 LMT . . . L 3 -8.673 33.934 -19.997 1 63.18 ? C3 LMT 502 C 1 HETATM 27 C C4 LMT . . . L 3 -8.246 32.557 -19.569 1 61.48 ? C4 LMT 502 C 1 HETATM 28 C C5 LMT . . . L 3 -8.963 32.163 -18.325 1 59.77 ? C5 LMT 502 C 1 HETATM 29 C C6 LMT . . . L 3 -9.077 30.683 -18.194 1 57.96 ? C6 LMT 502 C 1 HETATM 30 C C7 LMT . . . L 3 -9.929 30.349 -17.007 1 56.4 ? C7 LMT 502 C 1 HETATM 31 C C8 LMT . . . L 3 -9.949 28.872 -16.834 1 55.03 ? C8 LMT 502 C 1 HETATM 32 C C9 LMT . . . L 3 -10.783 28.148 -17.837 1 54.01 ? C9 LMT 502 C 1 HETATM 33 C C10 LMT . . . L 3 -11.993 27.63 -17.113 1 52.65 ? C10 LMT 502 C 1 HETATM 34 C C11 LMT . . . L 3 -12.269 26.205 -17.465 1 51.57 ? C11 LMT 502 C 1 HETATM 35 C C12 LMT . . . L 3 -11.117 25.326 -17.115 1 51.66 ? C12 LMT 502 C 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 35 #