data_8W7O # _model_server_result.job_id e7LdWhFQHxQjgMb3My898Q _model_server_result.datetime_utc '2024-11-15 17:16:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8w7o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 8W7O # _exptl.entry_id 8W7O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8W7O _cell.length_a 180.504 _cell.length_b 180.504 _cell.length_c 180.504 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8W7O _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 180.504 180.504 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 180.504 0 180.504 4 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 180.504 180.504 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_566 z,-x+1,-y+1 0 0 1 -1 0 0 0 -1 0 0 180.504 180.504 7 'crystal symmetry operation' 7_665 -z+1,-x+1,y 0 0 -1 -1 0 0 0 1 0 180.504 180.504 0 8 'crystal symmetry operation' 8_656 -z+1,x,-y+1 0 0 -1 1 0 0 0 -1 0 180.504 0 180.504 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_656 -y+1,z,-x+1 0 -1 0 0 0 1 -1 0 0 180.504 0 180.504 11 'crystal symmetry operation' 11_566 y,-z+1,-x+1 0 1 0 0 0 -1 -1 0 0 0 180.504 180.504 12 'crystal symmetry operation' 12_665 -y+1,-z+1,x 0 -1 0 0 0 -1 1 0 0 180.504 180.504 0 13 'crystal symmetry operation' 13_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 180.504 14 'crystal symmetry operation' 14_666 -y+1,-x+1,-z+1 0 -1 0 -1 0 0 0 0 -1 180.504 180.504 180.504 15 'crystal symmetry operation' 15_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 180.504 0 16 'crystal symmetry operation' 16_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 180.504 0 0 17 'crystal symmetry operation' 17_556 x,z,-y+1 1 0 0 0 0 1 0 -1 0 0 0 180.504 18 'crystal symmetry operation' 18_655 -x+1,z,y -1 0 0 0 0 1 0 1 0 180.504 0 0 19 'crystal symmetry operation' 19_666 -x+1,-z+1,-y+1 -1 0 0 0 0 -1 0 -1 0 180.504 180.504 180.504 20 'crystal symmetry operation' 20_565 x,-z+1,y 1 0 0 0 0 -1 0 1 0 0 180.504 0 21 'crystal symmetry operation' 21_556 z,y,-x+1 0 0 1 0 1 0 -1 0 0 0 0 180.504 22 'crystal symmetry operation' 22_565 z,-y+1,x 0 0 1 0 -1 0 1 0 0 0 180.504 0 23 'crystal symmetry operation' 23_655 -z+1,y,x 0 0 -1 0 1 0 1 0 0 180.504 0 0 24 'crystal symmetry operation' 24_666 -z+1,-y+1,-x+1 0 0 -1 0 -1 0 -1 0 0 180.504 180.504 180.504 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 39 A HIS 39 1_555 F FE FE . A FE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc2 A OD2 ASP 43 A ASP 43 1_555 F FE FE . A FE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc3 A NE2 HIS 56 A HIS 56 1_555 G FE FE . A FE 206 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc4 A OD2 ASP 60 A ASP 60 1_555 E FE FE . A FE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc5 A NE2 HIS 65 A HIS 65 1_555 E FE FE . A FE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc6 A OD2 ASP 138 A ASP 138 1_555 E FE FE . A FE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc7 A OD2 ASP 142 A ASP 142 1_555 E FE FE . A FE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc8 A OE2 GLU 164 A GLU 164 1_555 B FE FE . A FE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc9 A OE2 GLU 164 A GLU 164 1_555 D FE FE . A FE 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc10 A OE2 GLU 164 A GLU 164 1_555 D FE FE . A FE 203 21_556 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc11 B FE FE . A FE 201 1_555 N O HOH . A HOH 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc12 B FE FE . A FE 201 1_555 N O HOH . A HOH 380 3_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc13 C FE FE . A FE 202 1_555 N O HOH . A HOH 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc14 C FE FE . A FE 202 1_555 N O HOH . A HOH 380 3_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc15 C FE FE . A FE 202 1_555 N O HOH . A HOH 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc16 C FE FE . A FE 202 1_555 N O HOH . A HOH 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc17 C FE FE . A FE 202 1_555 N O HOH . A HOH 391 3_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc18 E FE FE . A FE 204 1_555 N O HOH . A HOH 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc19 F FE FE . A FE 205 1_555 N O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc20 H FE FE . A FE 207 1_555 N O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc21 L FE FE . A FE 211 1_555 N O HOH . A HOH 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc22 L FE FE . A FE 211 1_555 N O HOH . A HOH 385 3_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc23 L FE FE . A FE 211 1_555 N O HOH . A HOH 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc24 L FE FE . A FE 211 1_555 N O HOH . A HOH 391 3_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc25 M MG MG . A MG 212 1_555 N O HOH . A HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc26 M MG MG . A MG 212 1_555 N O HOH . A HOH 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc27 M MG MG . A MG 212 1_555 N O HOH . A HOH 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc28 M MG MG . A MG 212 1_555 N O HOH . A HOH 388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc29 M MG MG . A MG 212 1_555 N O HOH . A HOH 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8W7O _atom_sites.fract_transf_matrix[1][1] 0.00554 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00554 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00554 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 201 2 FE FE . C 2 FE A 1 202 3 FE FE . D 2 FE A 1 203 5 FE FE . E 2 FE A 1 204 6 FE FE . F 2 FE A 1 205 7 FE FE . G 2 FE A 1 206 8 FE FE . H 2 FE A 1 207 9 FE FE . I 2 FE A 1 208 10 FE FE . J 2 FE A 1 209 11 FE FE . K 2 FE A 1 210 12 FE FE . L 2 FE A 1 211 13 FE FE . M 3 MG A 1 212 1 MG MG . N 4 HOH A 1 301 78 HOH HOH . N 4 HOH A 2 302 11 HOH HOH . N 4 HOH A 3 303 68 HOH HOH . N 4 HOH A 4 304 23 HOH HOH . N 4 HOH A 5 305 51 HOH HOH . N 4 HOH A 6 306 34 HOH HOH . N 4 HOH A 7 307 85 HOH HOH . N 4 HOH A 8 308 70 HOH HOH . N 4 HOH A 9 309 19 HOH HOH . N 4 HOH A 10 310 53 HOH HOH . N 4 HOH A 11 311 13 HOH HOH . N 4 HOH A 12 312 48 HOH HOH . N 4 HOH A 13 313 14 HOH HOH . N 4 HOH A 14 314 5 HOH HOH . N 4 HOH A 15 315 41 HOH HOH . N 4 HOH A 16 316 9 HOH HOH . N 4 HOH A 17 317 32 HOH HOH . N 4 HOH A 18 318 6 HOH HOH . N 4 HOH A 19 319 20 HOH HOH . N 4 HOH A 20 320 36 HOH HOH . N 4 HOH A 21 321 56 HOH HOH . N 4 HOH A 22 322 40 HOH HOH . N 4 HOH A 23 323 52 HOH HOH . N 4 HOH A 24 324 39 HOH HOH . N 4 HOH A 25 325 22 HOH HOH . N 4 HOH A 26 326 67 HOH HOH . N 4 HOH A 27 327 27 HOH HOH . N 4 HOH A 28 328 77 HOH HOH . N 4 HOH A 29 329 15 HOH HOH . N 4 HOH A 30 330 50 HOH HOH . N 4 HOH A 31 331 24 HOH HOH . N 4 HOH A 32 332 42 HOH HOH . N 4 HOH A 33 333 79 HOH HOH . N 4 HOH A 34 334 58 HOH HOH . N 4 HOH A 35 335 29 HOH HOH . N 4 HOH A 36 336 74 HOH HOH . N 4 HOH A 37 337 30 HOH HOH . N 4 HOH A 38 338 47 HOH HOH . N 4 HOH A 39 339 38 HOH HOH . N 4 HOH A 40 340 69 HOH HOH . N 4 HOH A 41 341 80 HOH HOH . N 4 HOH A 42 342 2 HOH HOH . N 4 HOH A 43 343 31 HOH HOH . N 4 HOH A 44 344 87 HOH HOH . N 4 HOH A 45 345 25 HOH HOH . N 4 HOH A 46 346 43 HOH HOH . N 4 HOH A 47 347 49 HOH HOH . N 4 HOH A 48 348 16 HOH HOH . N 4 HOH A 49 349 63 HOH HOH . N 4 HOH A 50 350 72 HOH HOH . N 4 HOH A 51 351 37 HOH HOH . N 4 HOH A 52 352 18 HOH HOH . N 4 HOH A 53 353 26 HOH HOH . N 4 HOH A 54 354 46 HOH HOH . N 4 HOH A 55 355 45 HOH HOH . N 4 HOH A 56 356 73 HOH HOH . N 4 HOH A 57 357 93 HOH HOH . N 4 HOH A 58 358 21 HOH HOH . N 4 HOH A 59 359 66 HOH HOH . N 4 HOH A 60 360 64 HOH HOH . N 4 HOH A 61 361 86 HOH HOH . N 4 HOH A 62 362 65 HOH HOH . N 4 HOH A 63 363 76 HOH HOH . N 4 HOH A 64 364 59 HOH HOH . N 4 HOH A 65 365 61 HOH HOH . N 4 HOH A 66 366 10 HOH HOH . N 4 HOH A 67 367 88 HOH HOH . N 4 HOH A 68 368 60 HOH HOH . N 4 HOH A 69 369 55 HOH HOH . N 4 HOH A 70 370 28 HOH HOH . N 4 HOH A 71 371 84 HOH HOH . N 4 HOH A 72 372 90 HOH HOH . N 4 HOH A 73 373 44 HOH HOH . N 4 HOH A 74 374 89 HOH HOH . N 4 HOH A 75 375 57 HOH HOH . N 4 HOH A 76 376 12 HOH HOH . N 4 HOH A 77 377 75 HOH HOH . N 4 HOH A 78 378 8 HOH HOH . N 4 HOH A 79 379 91 HOH HOH . N 4 HOH A 80 380 17 HOH HOH . N 4 HOH A 81 381 94 HOH HOH . N 4 HOH A 82 382 54 HOH HOH . N 4 HOH A 83 383 71 HOH HOH . N 4 HOH A 84 384 35 HOH HOH . N 4 HOH A 85 385 96 HOH HOH . N 4 HOH A 86 386 62 HOH HOH . N 4 HOH A 87 387 92 HOH HOH . N 4 HOH A 88 388 4 HOH HOH . N 4 HOH A 89 389 3 HOH HOH . N 4 HOH A 90 390 33 HOH HOH . N 4 HOH A 91 391 95 HOH HOH . N 4 HOH A 92 392 82 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 64.751 _atom_site.Cartn_y 55.785 _atom_site.Cartn_z 78.801 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.61 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 204 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 1 #