data_8W8R
#
_model_server_result.job_id            czfv2uDtG9pWJNgcq9V63w 
_model_server_result.datetime_utc      '2025-03-05 22:00:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8w8r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":602}' 
#
_entry.id    8W8R 
#
_exptl.entry_id    8W8R 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              311.325 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-(4-methylpyridin-2-yl)-3-[3-(trifluoromethyl)phenyl]thiourea 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8W8R 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8W8R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 F N N 
? 6 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 C SG CYS 104 R CYS 104 1_555 C SG CYS 182 R CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 D SG CYS 59 S CYS 22 1_555 D SG CYS 133 S CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf3 D SG CYS 197 S CYS 159 1_555 D SG CYS 267 S CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
#
_chem_comp.formula           'C14 H12 F3 N3 S' 
_chem_comp.formula_weight    311.325 
_chem_comp.id                U7D 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-(4-methylpyridin-2-yl)-3-[3-(trifluoromethyl)phenyl]thiourea 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     CHEMBL2134995 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F02 C14 U7D sing 356 n n 
F01 C14 U7D sing 357 n n 
F03 C14 U7D sing 358 n n 
C14 C12 U7D sing 359 n n 
C12 C11 U7D doub 360 n y 
C12 C13 U7D sing 361 n y 
C11 C10 U7D sing 362 n y 
C13 C08 U7D doub 363 n y 
C10 C09 U7D doub 364 n y 
C08 C09 U7D sing 365 n y 
C08 N03 U7D sing 366 n n 
N03 C07 U7D sing 367 n n 
N01 C02 U7D doub 368 n y 
N01 C03 U7D sing 369 n y 
N02 C07 U7D sing 370 n n 
N02 C03 U7D sing 371 n n 
C07 S01 U7D doub 372 n n 
C02 C01 U7D sing 373 n y 
C03 C04 U7D doub 374 n y 
C01 C05 U7D doub 375 n y 
C04 C05 U7D sing 376 n y 
C05 C06 U7D sing 377 n n 
C10 H1 U7D sing 378 n n 
C11 H2 U7D sing 379 n n 
C13 H3 U7D sing 380 n n 
C01 H4 U7D sing 381 n n 
C02 H5 U7D sing 382 n n 
N02 H6 U7D sing 383 n n 
N03 H7 U7D sing 384 n n 
C04 H8 U7D sing 385 n n 
C06 H9 U7D sing 386 n n 
C06 H10 U7D sing 387 n n 
C06 H11 U7D sing 388 n n 
C09 H12 U7D sing 389 n n 
#
_atom_sites.entry_id                     8W8R 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 U7D R 1 601 501 U7D FFF . 
G 6 U7D R 1 602 502 U7D FFF . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 U7D . . . G 6 84.387 102.811 102.428 1 155.28 ? C10 U7D 602 R 1 
HETATM 2 C C11 U7D . . . G 6 85.122 103.573 101.536 1 155.68 ? C11 U7D 602 R 1 
HETATM 3 C C12 U7D . . . G 6 85.026 104.955 101.561 1 156.33 ? C12 U7D 602 R 1 
HETATM 4 C C13 U7D . . . G 6 84.196 105.577 102.48 1 155.4 ? C13 U7D 602 R 1 
HETATM 5 C C14 U7D . . . G 6 85.839 105.793 100.577 1 156.21 ? C14 U7D 602 R 1 
HETATM 6 C C01 U7D . . . G 6 84.395 103.738 110.323 1 155.41 ? C01 U7D 602 R 1 
HETATM 7 N N01 U7D . . . G 6 84.488 105.208 108.43 1 156.04 ? N01 U7D 602 R 1 
HETATM 8 S S01 U7D . . . G 6 81.782 106.01 106.786 1 153.98 ? S01 U7D 602 R 1 
HETATM 9 C C02 U7D . . . G 6 84.659 104.962 109.729 1 155.42 ? C02 U7D 602 R 1 
HETATM 10 N N02 U7D . . . G 6 83.831 104.419 106.263 1 157.1 ? N02 U7D 602 R 1 
HETATM 11 C C03 U7D . . . G 6 84.032 104.201 107.684 1 156.59 ? C03 U7D 602 R 1 
HETATM 12 N N03 U7D . . . G 6 82.59 105.467 104.336 1 154.91 ? N03 U7D 602 R 1 
HETATM 13 C C04 U7D . . . G 6 83.742 102.942 108.186 1 156.07 ? C04 U7D 602 R 1 
HETATM 14 C C05 U7D . . . G 6 83.929 102.718 109.528 1 155.76 ? C05 U7D 602 R 1 
HETATM 15 C C06 U7D . . . G 6 83.622 101.348 110.129 1 155.07 ? C06 U7D 602 R 1 
HETATM 16 C C07 U7D . . . G 6 82.766 105.274 105.766 1 156.22 ? C07 U7D 602 R 1 
HETATM 17 C C08 U7D . . . G 6 83.462 104.815 103.374 1 155.27 ? C08 U7D 602 R 1 
HETATM 18 C C09 U7D . . . G 6 83.555 103.433 103.344 1 155.58 ? C09 U7D 602 R 1 
HETATM 19 F F01 U7D . . . G 6 85.201 106.979 100.353 1 155.36 ? F01 U7D 602 R 1 
HETATM 20 F F02 U7D . . . G 6 87.076 106.037 101.1 1 155.73 ? F02 U7D 602 R 1 
HETATM 21 F F03 U7D . . . G 6 85.968 105.117 99.398 1 155.53 ? F03 U7D 602 R 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           525 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           21 
#