data_8WB1 # _model_server_result.job_id ooFGeKSxS7IpDhbwCLCZow _model_server_result.datetime_utc '2024-11-14 10:48:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8wb1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 8WB1 # _exptl.entry_id 8WB1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8WB1 _cell.length_a 40.099 _cell.length_b 51.955 _cell.length_c 90.475 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8WB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OD2 ASP 13 A ASP 12 1_555 E C15 W3T . A W3T 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? metalc ? metalc1 A OG SER 18 A SER 18 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc2 B O3B GDP . A GDP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc3 C MG MG . A MG 202 1_555 F O HOH . A HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc4 C MG MG . A MG 202 1_555 F O HOH . A HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc5 C MG MG . A MG 202 1_555 F O HOH . A HOH 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc6 C MG MG . A MG 202 1_555 F O HOH . A HOH 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8WB1 _atom_sites.fract_transf_matrix[1][1] 0.024938 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019247 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011053 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP A 1 201 201 GDP GDP . C 3 MG A 1 202 203 MG MG . D 4 EDO A 1 203 204 EDO EDO . E 5 W3T A 1 204 12 W3T N2D . F 6 HOH A 1 301 374 HOH HOH . F 6 HOH A 2 302 345 HOH HOH . F 6 HOH A 3 303 365 HOH HOH . F 6 HOH A 4 304 332 HOH HOH . F 6 HOH A 5 305 334 HOH HOH . F 6 HOH A 6 306 319 HOH HOH . F 6 HOH A 7 307 333 HOH HOH . F 6 HOH A 8 308 318 HOH HOH . F 6 HOH A 9 309 331 HOH HOH . F 6 HOH A 10 310 312 HOH HOH . F 6 HOH A 11 311 303 HOH HOH . F 6 HOH A 12 312 308 HOH HOH . F 6 HOH A 13 313 391 HOH HOH . F 6 HOH A 14 314 338 HOH HOH . F 6 HOH A 15 315 398 HOH HOH . F 6 HOH A 16 316 335 HOH HOH . F 6 HOH A 17 317 324 HOH HOH . F 6 HOH A 18 318 400 HOH HOH . F 6 HOH A 19 319 356 HOH HOH . F 6 HOH A 20 320 397 HOH HOH . F 6 HOH A 21 321 327 HOH HOH . F 6 HOH A 22 322 313 HOH HOH . F 6 HOH A 23 323 325 HOH HOH . F 6 HOH A 24 324 349 HOH HOH . F 6 HOH A 25 325 358 HOH HOH . F 6 HOH A 26 326 311 HOH HOH . F 6 HOH A 27 327 317 HOH HOH . F 6 HOH A 28 328 354 HOH HOH . F 6 HOH A 29 329 371 HOH HOH . F 6 HOH A 30 330 314 HOH HOH . F 6 HOH A 31 331 336 HOH HOH . F 6 HOH A 32 332 301 HOH HOH . F 6 HOH A 33 333 306 HOH HOH . F 6 HOH A 34 334 320 HOH HOH . F 6 HOH A 35 335 384 HOH HOH . F 6 HOH A 36 336 340 HOH HOH . F 6 HOH A 37 337 387 HOH HOH . F 6 HOH A 38 338 377 HOH HOH . F 6 HOH A 39 339 321 HOH HOH . F 6 HOH A 40 340 373 HOH HOH . F 6 HOH A 41 341 322 HOH HOH . F 6 HOH A 42 342 302 HOH HOH . F 6 HOH A 43 343 315 HOH HOH . F 6 HOH A 44 344 346 HOH HOH . F 6 HOH A 45 345 341 HOH HOH . F 6 HOH A 46 346 360 HOH HOH . F 6 HOH A 47 347 364 HOH HOH . F 6 HOH A 48 348 326 HOH HOH . F 6 HOH A 49 349 369 HOH HOH . F 6 HOH A 50 350 367 HOH HOH . F 6 HOH A 51 351 350 HOH HOH . F 6 HOH A 52 352 343 HOH HOH . F 6 HOH A 53 353 372 HOH HOH . F 6 HOH A 54 354 352 HOH HOH . F 6 HOH A 55 355 403 HOH HOH . F 6 HOH A 56 356 323 HOH HOH . F 6 HOH A 57 357 381 HOH HOH . F 6 HOH A 58 358 348 HOH HOH . F 6 HOH A 59 359 339 HOH HOH . F 6 HOH A 60 360 330 HOH HOH . F 6 HOH A 61 361 402 HOH HOH . F 6 HOH A 62 362 351 HOH HOH . F 6 HOH A 63 363 368 HOH HOH . F 6 HOH A 64 364 359 HOH HOH . F 6 HOH A 65 365 363 HOH HOH . F 6 HOH A 66 366 329 HOH HOH . F 6 HOH A 67 367 378 HOH HOH . F 6 HOH A 68 368 304 HOH HOH . F 6 HOH A 69 369 316 HOH HOH . F 6 HOH A 70 370 305 HOH HOH . F 6 HOH A 71 371 361 HOH HOH . F 6 HOH A 72 372 347 HOH HOH . F 6 HOH A 73 373 395 HOH HOH . F 6 HOH A 74 374 370 HOH HOH . F 6 HOH A 75 375 353 HOH HOH . F 6 HOH A 76 376 390 HOH HOH . F 6 HOH A 77 377 307 HOH HOH . F 6 HOH A 78 378 310 HOH HOH . F 6 HOH A 79 379 394 HOH HOH . F 6 HOH A 80 380 376 HOH HOH . F 6 HOH A 81 381 383 HOH HOH . F 6 HOH A 82 382 342 HOH HOH . F 6 HOH A 83 383 386 HOH HOH . F 6 HOH A 84 384 382 HOH HOH . F 6 HOH A 85 385 396 HOH HOH . F 6 HOH A 86 386 385 HOH HOH . F 6 HOH A 87 387 401 HOH HOH . F 6 HOH A 88 388 366 HOH HOH . F 6 HOH A 89 389 337 HOH HOH . F 6 HOH A 90 390 375 HOH HOH . F 6 HOH A 91 391 344 HOH HOH . F 6 HOH A 92 392 388 HOH HOH . F 6 HOH A 93 393 379 HOH HOH . F 6 HOH A 94 394 393 HOH HOH . F 6 HOH A 95 395 355 HOH HOH . F 6 HOH A 96 396 399 HOH HOH . F 6 HOH A 97 397 357 HOH HOH . F 6 HOH A 98 398 392 HOH HOH . F 6 HOH A 99 399 380 HOH HOH . F 6 HOH A 100 400 389 HOH HOH . F 6 HOH A 101 401 362 HOH HOH . F 6 HOH A 102 402 328 HOH HOH . F 6 HOH A 103 403 309 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 7.423 _atom_site.Cartn_y -6.249 _atom_site.Cartn_z -18.42 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #