data_8WCK
#
_model_server_result.job_id            oJxkrVKO3ehUZ9W5QXl5_A 
_model_server_result.datetime_utc      '2025-09-03 23:44:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wck 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"XB","auth_seq_id":317}' 
#
_entry.id    8WCK 
#
_exptl.entry_id    8WCK 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8WCK 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WCK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 T N N 
? 6 U N N 
? 6 NA N N 
? 6 OA N N 
? 6 FB N N 
? 6 GB N N 
? 6 WB N N 
? 6 XB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 64 1 GLU 64 1_555 K MG CLA . 1 CLA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.99 ? 
metalc ? metalc2 A OE1 GLU 128 1 GLU 128 1_555 O MG KC1 . 1 KC1 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.956 ? 
metalc ? metalc3 A OE2 GLU 163 1 GLU 163 1_555 P MG CLA . 1 CLA 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.949 ? 
metalc ? metalc4 B OE2 GLU 64 2 GLU 64 1_555 EA MG CLA . 2 CLA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.99 ? 
metalc ? metalc5 B OE1 GLU 128 2 GLU 128 1_555 IA MG KC1 . 2 KC1 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.958 ? 
metalc ? metalc6 B OE2 GLU 163 2 GLU 163 1_555 JA MG CLA . 2 CLA 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.949 ? 
metalc ? metalc7 B OD1 ASN 166 2 ASN 166 1_555 KA MG KC1 . 2 KC1 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.97 ? 
metalc ? metalc8 C OE2 GLU 64 3 GLU 64 1_555 WA MG CLA . 3 CLA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.99 ? 
metalc ? metalc9 C OE1 GLU 128 3 GLU 128 1_555 AB MG KC1 . 3 KC1 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.958 ? 
metalc ? metalc10 C OE2 GLU 163 3 GLU 163 1_555 BB MG CLA . 3 CLA 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.948 ? 
metalc ? metalc11 D OE2 GLU 64 4 GLU 64 1_555 NB MG CLA . 4 CLA 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.99 ? 
metalc ? metalc12 D OE1 GLU 128 4 GLU 128 1_555 RB MG KC1 . 4 KC1 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.958 ? 
metalc ? metalc13 D OE2 GLU 163 4 GLU 163 1_555 SB MG CLA . 4 CLA 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.948 ? 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B C2B LMT sing 596 n n 
C1B O1B LMT sing 597 n n 
C1B O5B LMT sing 598 n n 
C1B H1B LMT sing 599 n n 
C2B C3B LMT sing 600 n n 
C2B O2B LMT sing 601 n n 
C2B H2B LMT sing 602 n n 
C3B C4B LMT sing 603 n n 
C3B O3B LMT sing 604 n n 
C3B H3B LMT sing 605 n n 
C4B C5B LMT sing 606 n n 
C4B O4' LMT sing 607 n n 
C4B H4B LMT sing 608 n n 
C5B C6B LMT sing 609 n n 
C5B O5B LMT sing 610 n n 
C5B H5B LMT sing 611 n n 
C6B O6B LMT sing 612 n n 
C6B "H6'2" LMT sing 613 n n 
C6B "H6'1" LMT sing 614 n n 
O1B C4' LMT sing 615 n n 
O2B H2O1 LMT sing 616 n n 
O3B H3O1 LMT sing 617 n n 
O4' H4O1 LMT sing 618 n n 
O6B H6B LMT sing 619 n n 
C1' C2' LMT sing 620 n n 
C1' O1' LMT sing 621 n n 
C1' O5' LMT sing 622 n n 
C1' H1' LMT sing 623 n n 
C2' C3' LMT sing 624 n n 
C2' O2' LMT sing 625 n n 
C2' H2' LMT sing 626 n n 
C3' C4' LMT sing 627 n n 
C3' O3' LMT sing 628 n n 
C3' H3' LMT sing 629 n n 
C4' C5' LMT sing 630 n n 
C4' H4' LMT sing 631 n n 
C5' C6' LMT sing 632 n n 
C5' O5' LMT sing 633 n n 
C5' H5' LMT sing 634 n n 
C6' O6' LMT sing 635 n n 
C6' H6D LMT sing 636 n n 
C6' H6E LMT sing 637 n n 
O1' C1 LMT sing 638 n n 
O2' H2O2 LMT sing 639 n n 
O3' H3O2 LMT sing 640 n n 
O6' H6' LMT sing 641 n n 
C1 C2 LMT sing 642 n n 
C1 H12 LMT sing 643 n n 
C1 H11 LMT sing 644 n n 
C2 C3 LMT sing 645 n n 
C2 H22 LMT sing 646 n n 
C2 H21 LMT sing 647 n n 
C3 C4 LMT sing 648 n n 
C3 H32 LMT sing 649 n n 
C3 H31 LMT sing 650 n n 
C4 C5 LMT sing 651 n n 
C4 H42 LMT sing 652 n n 
C4 H41 LMT sing 653 n n 
C5 C6 LMT sing 654 n n 
C5 H52 LMT sing 655 n n 
C5 H51 LMT sing 656 n n 
C6 C7 LMT sing 657 n n 
C6 H62 LMT sing 658 n n 
C6 H61 LMT sing 659 n n 
C7 C8 LMT sing 660 n n 
C7 H72 LMT sing 661 n n 
C7 H71 LMT sing 662 n n 
C8 C9 LMT sing 663 n n 
C8 H82 LMT sing 664 n n 
C8 H81 LMT sing 665 n n 
C9 C10 LMT sing 666 n n 
C9 H92 LMT sing 667 n n 
C9 H91 LMT sing 668 n n 
C10 C11 LMT sing 669 n n 
C10 H102 LMT sing 670 n n 
C10 H101 LMT sing 671 n n 
C11 C12 LMT sing 672 n n 
C11 H112 LMT sing 673 n n 
C11 H111 LMT sing 674 n n 
C12 H123 LMT sing 675 n n 
C12 H122 LMT sing 676 n n 
C12 H121 LMT sing 677 n n 
#
_atom_sites.entry_id                     8WCK 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 A86 1 1 301 301 A86 A86 . 
F 2 A86 1 1 302 302 A86 A86 . 
G 2 A86 1 1 303 303 A86 A86 . 
H 2 A86 1 1 304 305 A86 A86 . 
I 2 A86 1 1 305 306 A86 A86 . 
J 2 A86 1 1 306 307 A86 A86 . 
K 3 CLA 1 1 307 402 CLA CLA . 
L 4 KC2 1 1 308 403 KC2 KC2 . 
M 3 CLA 1 1 309 404 CLA CLA . 
N 4 KC2 1 1 310 405 KC2 KC2 . 
O 5 KC1 1 1 311 406 KC1 KC1 . 
P 3 CLA 1 1 312 407 CLA CLA . 
Q 5 KC1 1 1 313 408 KC1 KC1 . 
R 3 CLA 1 1 314 409 CLA CLA . 
S 3 CLA 1 1 315 410 CLA CLA . 
T 6 LMT 1 1 316 412 LMT LMT . 
U 6 LMT 1 1 317 413 LMT LMT . 
V 3 CLA 1 1 318 401 CLA CLA . 
W 3 CLA 2 1 401 401 CLA CLA . 
X 2 A86 2 1 402 301 A86 A86 . 
Y 2 A86 2 1 403 302 A86 A86 . 
Z 2 A86 2 1 404 303 A86 A86 . 
AA 2 A86 2 1 405 305 A86 A86 . 
BA 2 A86 2 1 406 306 A86 A86 . 
CA 2 A86 2 1 407 307 A86 A86 . 
DA 3 CLA 2 1 408 401 CLA CLA . 
EA 3 CLA 2 1 409 402 CLA CLA . 
FA 4 KC2 2 1 410 403 KC2 KC2 . 
GA 3 CLA 2 1 411 404 CLA CLA . 
HA 4 KC2 2 1 412 405 KC2 KC2 . 
IA 5 KC1 2 1 413 406 KC1 KC1 . 
JA 3 CLA 2 1 414 407 CLA CLA . 
KA 5 KC1 2 1 415 408 KC1 KC1 . 
LA 3 CLA 2 1 416 409 CLA CLA . 
MA 3 CLA 2 1 417 410 CLA CLA . 
NA 6 LMT 2 1 418 412 LMT LMT . 
OA 6 LMT 2 1 419 413 LMT LMT . 
PA 2 A86 3 1 301 301 A86 A86 . 
QA 2 A86 3 1 302 302 A86 A86 . 
RA 2 A86 3 1 303 303 A86 A86 . 
SA 2 A86 3 1 304 305 A86 A86 . 
TA 2 A86 3 1 305 306 A86 A86 . 
UA 2 A86 3 1 306 307 A86 A86 . 
VA 3 CLA 3 1 307 401 CLA CLA . 
WA 3 CLA 3 1 308 402 CLA CLA . 
XA 4 KC2 3 1 309 403 KC2 KC2 . 
YA 3 CLA 3 1 310 404 CLA CLA . 
ZA 4 KC2 3 1 311 405 KC2 KC2 . 
AB 5 KC1 3 1 312 406 KC1 KC1 . 
BB 3 CLA 3 1 313 407 CLA CLA . 
CB 5 KC1 3 1 314 408 KC1 KC1 . 
DB 3 CLA 3 1 315 409 CLA CLA . 
EB 3 CLA 3 1 316 410 CLA CLA . 
FB 6 LMT 3 1 317 412 LMT LMT . 
GB 6 LMT 3 1 318 413 LMT LMT . 
HB 2 A86 4 1 301 301 A86 A86 . 
IB 2 A86 4 1 302 302 A86 A86 . 
JB 2 A86 4 1 303 303 A86 A86 . 
KB 2 A86 4 1 304 305 A86 A86 . 
LB 2 A86 4 1 305 306 A86 A86 . 
MB 2 A86 4 1 306 307 A86 A86 . 
NB 3 CLA 4 1 307 402 CLA CLA . 
OB 4 KC2 4 1 308 403 KC2 KC2 . 
PB 3 CLA 4 1 309 404 CLA CLA . 
QB 4 KC2 4 1 310 405 KC2 KC2 . 
RB 5 KC1 4 1 311 406 KC1 KC1 . 
SB 3 CLA 4 1 312 407 CLA CLA . 
TB 5 KC1 4 1 313 408 KC1 KC1 . 
UB 3 CLA 4 1 314 409 CLA CLA . 
VB 3 CLA 4 1 315 410 CLA CLA . 
WB 6 LMT 4 1 316 412 LMT LMT . 
XB 6 LMT 4 1 317 413 LMT LMT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B LMT . . . XB 6 214.721 266.454 231.264 1 78.21 ? C1B LMT 317 4 1 
HETATM 2 C C2B LMT . . . XB 6 214.034 265.186 230.722 1 78.21 ? C2B LMT 317 4 1 
HETATM 3 C C3B LMT . . . XB 6 215.068 264.199 230.14 1 78.21 ? C3B LMT 317 4 1 
HETATM 4 C C4B LMT . . . XB 6 216.032 264.916 229.167 1 78.21 ? C4B LMT 317 4 1 
HETATM 5 C C5B LMT . . . XB 6 216.605 266.134 229.903 1 78.21 ? C5B LMT 317 4 1 
HETATM 6 C C6B LMT . . . XB 6 217.602 266.858 229.008 1 78.21 ? C6B LMT 317 4 1 
HETATM 7 O O1B LMT . . . XB 6 215.414 266.13 232.423 1 78.21 ? O1B LMT 317 4 1 
HETATM 8 O O2B LMT . . . XB 6 213.366 264.616 231.773 1 78.21 ? O2B LMT 317 4 1 
HETATM 9 O O3B LMT . . . XB 6 214.462 263.111 229.569 1 78.21 ? O3B LMT 317 4 1 
HETATM 10 O O4' LMT . . . XB 6 217.061 264.082 228.8 1 78.21 ? O4' LMT 317 4 1 
HETATM 11 O O5B LMT . . . XB 6 215.59 267.008 230.323 1 78.21 ? O5B LMT 317 4 1 
HETATM 12 O O6B LMT . . . XB 6 218.308 265.952 228.262 1 78.21 ? O6B LMT 317 4 1 
HETATM 13 C C1' LMT . . . XB 6 215.986 267.149 236.342 1 78.21 ? C1' LMT 317 4 1 
HETATM 14 C C2' LMT . . . XB 6 214.512 266.882 235.975 1 78.21 ? C2' LMT 317 4 1 
HETATM 15 C C3' LMT . . . XB 6 214.435 266.194 234.588 1 78.21 ? C3' LMT 317 4 1 
HETATM 16 C C4' LMT . . . XB 6 215.245 266.969 233.539 1 78.21 ? C4' LMT 317 4 1 
HETATM 17 C C5' LMT . . . XB 6 216.638 267.196 234.159 1 78.21 ? C5' LMT 317 4 1 
HETATM 18 C C6' LMT . . . XB 6 217.632 267.825 233.224 1 78.21 ? C6' LMT 317 4 1 
HETATM 19 O O1' LMT . . . XB 6 216.086 267.847 237.511 1 78.21 ? O1' LMT 317 4 1 
HETATM 20 O O2' LMT . . . XB 6 213.963 266.041 236.906 1 78.21 ? O2' LMT 317 4 1 
HETATM 21 O O3' LMT . . . XB 6 213.142 266.079 234.181 1 78.21 ? O3' LMT 317 4 1 
HETATM 22 O O5' LMT . . . XB 6 216.543 267.96 235.327 1 78.21 ? O5' LMT 317 4 1 
HETATM 23 O O6' LMT . . . XB 6 216.923 268.72 232.472 1 78.21 ? O6' LMT 317 4 1 
HETATM 24 C C1 LMT . . . XB 6 216.353 267.056 238.648 1 78.21 ? C1 LMT 317 4 1 
HETATM 25 C C2 LMT . . . XB 6 217.314 267.856 239.474 1 78.21 ? C2 LMT 317 4 1 
HETATM 26 C C3 LMT . . . XB 6 217.36 267.529 240.93 1 78.21 ? C3 LMT 317 4 1 
HETATM 27 C C4 LMT . . . XB 6 218.362 268.453 241.564 1 78.21 ? C4 LMT 317 4 1 
HETATM 28 C C5 LMT . . . XB 6 218.229 268.435 243.047 1 78.21 ? C5 LMT 317 4 1 
HETATM 29 C C6 LMT . . . XB 6 218.935 267.28 243.663 1 78.21 ? C6 LMT 317 4 1 
HETATM 30 C C7 LMT . . . XB 6 219.126 267.525 245.128 1 78.21 ? C7 LMT 317 4 1 
HETATM 31 C C8 LMT . . . XB 6 219.44 266.232 245.792 1 78.21 ? C8 LMT 317 4 1 
HETATM 32 C C9 LMT . . . XB 6 219.697 266.336 247.259 1 78.21 ? C9 LMT 317 4 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           32 
#