data_8WD9 # _model_server_result.job_id CAV_sIpO8lmmEvr4VN7ycg _model_server_result.datetime_utc '2024-11-14 00:49:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8wd9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 8WD9 # _exptl.entry_id 8WD9 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8WD9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8WD9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D N CYS 1 A CYS 25 1_555 E C1 PLM . A PLM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.59 ? covale ? covale2 D SG CYS 1 A CYS 25 1_555 F C37 9XX . A 9XX 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 373 n n C1 O2 PLM doub 374 n n C1 C2 PLM sing 375 n n O1 H PLM sing 376 n n C2 C3 PLM sing 377 n n C2 H21 PLM sing 378 n n C2 H22 PLM sing 379 n n C3 C4 PLM sing 380 n n C3 H31 PLM sing 381 n n C3 H32 PLM sing 382 n n C4 C5 PLM sing 383 n n C4 H41 PLM sing 384 n n C4 H42 PLM sing 385 n n C5 C6 PLM sing 386 n n C5 H51 PLM sing 387 n n C5 H52 PLM sing 388 n n C6 C7 PLM sing 389 n n C6 H61 PLM sing 390 n n C6 H62 PLM sing 391 n n C7 C8 PLM sing 392 n n C7 H71 PLM sing 393 n n C7 H72 PLM sing 394 n n C8 C9 PLM sing 395 n n C8 H81 PLM sing 396 n n C8 H82 PLM sing 397 n n C9 CA PLM sing 398 n n C9 H91 PLM sing 399 n n C9 H92 PLM sing 400 n n CA CB PLM sing 401 n n CA HA1 PLM sing 402 n n CA HA2 PLM sing 403 n n CB CC PLM sing 404 n n CB HB1 PLM sing 405 n n CB HB2 PLM sing 406 n n CC CD PLM sing 407 n n CC HC1 PLM sing 408 n n CC HC2 PLM sing 409 n n CD CE PLM sing 410 n n CD HD1 PLM sing 411 n n CD HD2 PLM sing 412 n n CE CF PLM sing 413 n n CE HE1 PLM sing 414 n n CE HE2 PLM sing 415 n n CF CG PLM sing 416 n n CF HF1 PLM sing 417 n n CF HF2 PLM sing 418 n n CG HG1 PLM sing 419 n n CG HG2 PLM sing 420 n n CG HG3 PLM sing 421 n n # _atom_sites.entry_id 8WD9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 PLM A 1 601 301 PLM PLM . F 6 9XX A 1 602 302 9XX 9XX . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . E 5 169.237 175.406 167.561 1 69.01 ? C1 PLM 601 A 1 HETATM 2 O O2 PLM . . . E 5 169.674 174.289 167.9 1 69.01 ? O2 PLM 601 A 1 HETATM 3 C C2 PLM . . . E 5 168.993 175.663 166.084 1 69.01 ? C2 PLM 601 A 1 HETATM 4 C C3 PLM . . . E 5 170.199 175.492 165.213 1 69.01 ? C3 PLM 601 A 1 HETATM 5 C C4 PLM . . . E 5 169.845 175.024 163.812 1 69.01 ? C4 PLM 601 A 1 HETATM 6 C C5 PLM . . . E 5 170.881 175.357 162.767 1 69.01 ? C5 PLM 601 A 1 HETATM 7 C C6 PLM . . . E 5 170.377 175.278 161.347 1 69.01 ? C6 PLM 601 A 1 HETATM 8 C C7 PLM . . . E 5 168.92 175.635 161.186 1 69.01 ? C7 PLM 601 A 1 HETATM 9 C C8 PLM . . . E 5 168.449 175.68 159.753 1 69.01 ? C8 PLM 601 A 1 HETATM 10 C C9 PLM . . . E 5 168.763 174.437 158.958 1 69.01 ? C9 PLM 601 A 1 HETATM 11 C CA PLM . . . E 5 169.894 174.602 157.972 1 69.01 ? CA PLM 601 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #