data_8WFE # _model_server_result.job_id mHF4xGDVSB-eStZFoX1l1A _model_server_result.datetime_utc '2024-11-10 01:24:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8wfe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 8WFE # _exptl.entry_id 8WFE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.73 _cell.angle_gamma 90 _cell.entry_id 8WFE _cell.length_a 91.808 _cell.length_b 62.297 _cell.length_c 118.415 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8WFE _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8WFE _atom_sites.fract_transf_matrix[1][1] 0.010892 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002262 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016052 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008625 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 601 1 EDO EDO . D 3 PEG A 1 602 3 PEG PEG . E 3 PEG B 1 601 2 PEG PEG . F 4 HOH A 1 701 30 HOH HOH . F 4 HOH A 2 702 25 HOH HOH . F 4 HOH A 3 703 27 HOH HOH . F 4 HOH A 4 704 61 HOH HOH . F 4 HOH A 5 705 70 HOH HOH . F 4 HOH A 6 706 37 HOH HOH . F 4 HOH A 7 707 24 HOH HOH . F 4 HOH A 8 708 68 HOH HOH . F 4 HOH A 9 709 73 HOH HOH . F 4 HOH A 10 710 9 HOH HOH . F 4 HOH A 11 711 35 HOH HOH . F 4 HOH A 12 712 26 HOH HOH . F 4 HOH A 13 713 48 HOH HOH . F 4 HOH A 14 714 97 HOH HOH . F 4 HOH A 15 715 36 HOH HOH . F 4 HOH A 16 716 43 HOH HOH . F 4 HOH A 17 717 74 HOH HOH . F 4 HOH A 18 718 65 HOH HOH . F 4 HOH A 19 719 64 HOH HOH . F 4 HOH A 20 720 20 HOH HOH . F 4 HOH A 21 721 45 HOH HOH . F 4 HOH A 22 722 49 HOH HOH . F 4 HOH A 23 723 67 HOH HOH . F 4 HOH A 24 724 100 HOH HOH . F 4 HOH A 25 725 72 HOH HOH . F 4 HOH A 26 726 14 HOH HOH . F 4 HOH A 27 727 28 HOH HOH . F 4 HOH A 28 728 29 HOH HOH . F 4 HOH A 29 729 16 HOH HOH . F 4 HOH A 30 730 33 HOH HOH . F 4 HOH A 31 731 69 HOH HOH . F 4 HOH A 32 732 1 HOH HOH . F 4 HOH A 33 733 96 HOH HOH . F 4 HOH A 34 734 32 HOH HOH . F 4 HOH A 35 735 101 HOH HOH . F 4 HOH A 36 736 40 HOH HOH . F 4 HOH A 37 737 13 HOH HOH . F 4 HOH A 38 738 62 HOH HOH . F 4 HOH A 39 739 10 HOH HOH . F 4 HOH A 40 740 3 HOH HOH . F 4 HOH A 41 741 75 HOH HOH . F 4 HOH A 42 742 99 HOH HOH . F 4 HOH A 43 743 95 HOH HOH . F 4 HOH A 44 744 8 HOH HOH . F 4 HOH A 45 745 47 HOH HOH . F 4 HOH A 46 746 98 HOH HOH . F 4 HOH A 47 747 17 HOH HOH . F 4 HOH A 48 748 46 HOH HOH . F 4 HOH A 49 749 41 HOH HOH . F 4 HOH A 50 750 31 HOH HOH . F 4 HOH A 51 751 5 HOH HOH . F 4 HOH A 52 752 34 HOH HOH . F 4 HOH A 53 753 42 HOH HOH . F 4 HOH A 54 754 38 HOH HOH . G 4 HOH B 1 701 11 HOH HOH . G 4 HOH B 2 702 50 HOH HOH . G 4 HOH B 3 703 79 HOH HOH . G 4 HOH B 4 704 63 HOH HOH . G 4 HOH B 5 705 23 HOH HOH . G 4 HOH B 6 706 57 HOH HOH . G 4 HOH B 7 707 6 HOH HOH . G 4 HOH B 8 708 18 HOH HOH . G 4 HOH B 9 709 66 HOH HOH . G 4 HOH B 10 710 15 HOH HOH . G 4 HOH B 11 711 85 HOH HOH . G 4 HOH B 12 712 51 HOH HOH . G 4 HOH B 13 713 19 HOH HOH . G 4 HOH B 14 714 22 HOH HOH . G 4 HOH B 15 715 44 HOH HOH . G 4 HOH B 16 716 60 HOH HOH . G 4 HOH B 17 717 7 HOH HOH . G 4 HOH B 18 718 90 HOH HOH . G 4 HOH B 19 719 4 HOH HOH . G 4 HOH B 20 720 89 HOH HOH . G 4 HOH B 21 721 21 HOH HOH . G 4 HOH B 22 722 56 HOH HOH . G 4 HOH B 23 723 91 HOH HOH . G 4 HOH B 24 724 77 HOH HOH . G 4 HOH B 25 725 52 HOH HOH . G 4 HOH B 26 726 94 HOH HOH . G 4 HOH B 27 727 80 HOH HOH . G 4 HOH B 28 728 93 HOH HOH . G 4 HOH B 29 729 83 HOH HOH . G 4 HOH B 30 730 86 HOH HOH . G 4 HOH B 31 731 71 HOH HOH . G 4 HOH B 32 732 84 HOH HOH . G 4 HOH B 33 733 59 HOH HOH . G 4 HOH B 34 734 88 HOH HOH . G 4 HOH B 35 735 82 HOH HOH . G 4 HOH B 36 736 54 HOH HOH . G 4 HOH B 37 737 2 HOH HOH . G 4 HOH B 38 738 78 HOH HOH . G 4 HOH B 39 739 12 HOH HOH . G 4 HOH B 40 740 81 HOH HOH . G 4 HOH B 41 741 55 HOH HOH . G 4 HOH B 42 742 39 HOH HOH . G 4 HOH B 43 743 92 HOH HOH . G 4 HOH B 44 744 76 HOH HOH . G 4 HOH B 45 745 58 HOH HOH . G 4 HOH B 46 746 53 HOH HOH . G 4 HOH B 47 747 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 16.901 3.886 9.045 1 78.94 0 C1 EDO 601 A 1 HETATM 2 O O1 EDO . . . C 2 17.92 4.838 8.8 1 77.37 0 O1 EDO 601 A 1 HETATM 3 C C2 EDO . . . C 2 15.539 4.472 8.999 1 78.97 0 C2 EDO 601 A 1 HETATM 4 O O2 EDO . . . C 2 14.54 3.585 9.461 1 80.66 0 O2 EDO 601 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #