data_8WFQ
#
_model_server_result.job_id            c_RPyOjzG8Wf1zyJk7vlDw 
_model_server_result.datetime_utc      '2024-11-15 16:04:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wfq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":601}' 
#
_entry.id    8WFQ 
#
_exptl.entry_id    8WFQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              665.441 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.428 
_cell.angle_gamma         90 
_cell.entry_id            8WFQ 
_cell.length_a            101.343 
_cell.length_b            149.56 
_cell.length_c            125.076 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WFQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,I,J,K,L,M,R,S,T,U 1 1 
E,F,G,H,N,O,P,Q,V,W,X,Y 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
#
_chem_comp.formula           'C21 H29 N7 O14 P2' 
_chem_comp.formula_weight    665.441 
_chem_comp.id                NAI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     NADH 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAI doub 246 n n 
PA O2A NAI sing 247 n n 
PA O5B NAI sing 248 n n 
PA O3 NAI sing 249 n n 
O2A HOA2 NAI sing 250 n n 
O5B C5B NAI sing 251 n n 
C5B C4B NAI sing 252 n n 
C5B H51A NAI sing 253 n n 
C5B H52A NAI sing 254 n n 
C4B O4B NAI sing 255 n n 
C4B C3B NAI sing 256 n n 
C4B H4B NAI sing 257 n n 
O4B C1B NAI sing 258 n n 
C3B O3B NAI sing 259 n n 
C3B C2B NAI sing 260 n n 
C3B H3B NAI sing 261 n n 
O3B HO3A NAI sing 262 n n 
C2B O2B NAI sing 263 n n 
C2B C1B NAI sing 264 n n 
C2B H2B NAI sing 265 n n 
O2B HO2A NAI sing 266 n n 
C1B N9A NAI sing 267 n n 
C1B H1B NAI sing 268 n n 
N9A C8A NAI sing 269 n y 
N9A C4A NAI sing 270 n y 
C8A N7A NAI doub 271 n y 
C8A H8A NAI sing 272 n n 
N7A C5A NAI sing 273 n y 
C5A C6A NAI sing 274 n y 
C5A C4A NAI doub 275 n y 
C6A N6A NAI sing 276 n n 
C6A N1A NAI doub 277 n y 
N6A H61A NAI sing 278 n n 
N6A H62A NAI sing 279 n n 
N1A C2A NAI sing 280 n y 
C2A N3A NAI doub 281 n y 
C2A H2A NAI sing 282 n n 
N3A C4A NAI sing 283 n y 
O3 PN NAI sing 284 n n 
PN O1N NAI sing 285 n n 
PN O2N NAI doub 286 n n 
PN O5D NAI sing 287 n n 
O1N HO1N NAI sing 288 n n 
O5D C5D NAI sing 289 n n 
C5D C4D NAI sing 290 n n 
C5D H51N NAI sing 291 n n 
C5D H52N NAI sing 292 n n 
C4D O4D NAI sing 293 n n 
C4D C3D NAI sing 294 n n 
C4D H4D NAI sing 295 n n 
O4D C1D NAI sing 296 n n 
C3D O3D NAI sing 297 n n 
C3D C2D NAI sing 298 n n 
C3D H3D NAI sing 299 n n 
O3D HO3N NAI sing 300 n n 
C2D O2D NAI sing 301 n n 
C2D C1D NAI sing 302 n n 
C2D H2D NAI sing 303 n n 
O2D HO2N NAI sing 304 n n 
C1D N1N NAI sing 305 n n 
C1D H1D NAI sing 306 n n 
N1N C2N NAI sing 307 n n 
N1N C6N NAI sing 308 n n 
C2N C3N NAI doub 309 n n 
C2N H2N NAI sing 310 n n 
C3N C7N NAI sing 311 n n 
C3N C4N NAI sing 312 n n 
C7N O7N NAI doub 313 n n 
C7N N7N NAI sing 314 n n 
N7N H71N NAI sing 315 n n 
N7N H72N NAI sing 316 n n 
C4N C5N NAI sing 317 n n 
C4N H4N NAI sing 318 n n 
C4N H42N NAI sing 319 n n 
C5N C6N NAI doub 320 n n 
C5N H5N NAI sing 321 n n 
C6N H6N NAI sing 322 n n 
#
_atom_sites.entry_id                     8WFQ 
_atom_sites.fract_transf_matrix[1][1]    0.009867 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000938 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006686 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008031 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 NAI A 1 601 502 NAI NAI . 
J 3 EDO A 1 602 503 EDO EDO . 
K 2 NAI B 1 601 502 NAI NAI . 
L 2 NAI C 1 601 502 NAI NAI . 
M 2 NAI D 1 601 502 NAI NAI . 
N 2 NAI E 1 601 502 NAI NAI . 
O 2 NAI F 1 601 502 NAI NAI . 
P 2 NAI G 1 601 502 NAI NAI . 
Q 2 NAI H 1 601 502 NAI NAI . 
R 4 HOH A 1 701 510 HOH HOH . 
R 4 HOH A 2 702 511 HOH HOH . 
R 4 HOH A 3 703 506 HOH HOH . 
R 4 HOH A 4 704 512 HOH HOH . 
R 4 HOH A 5 705 509 HOH HOH . 
R 4 HOH A 6 706 507 HOH HOH . 
R 4 HOH A 7 707 505 HOH HOH . 
R 4 HOH A 8 708 504 HOH HOH . 
R 4 HOH A 9 709 513 HOH HOH . 
R 4 HOH A 10 710 514 HOH HOH . 
R 4 HOH A 11 711 508 HOH HOH . 
S 4 HOH B 1 701 504 HOH HOH . 
S 4 HOH B 2 702 510 HOH HOH . 
S 4 HOH B 3 703 511 HOH HOH . 
S 4 HOH B 4 704 503 HOH HOH . 
S 4 HOH B 5 705 509 HOH HOH . 
S 4 HOH B 6 706 506 HOH HOH . 
S 4 HOH B 7 707 508 HOH HOH . 
S 4 HOH B 8 708 505 HOH HOH . 
S 4 HOH B 9 709 507 HOH HOH . 
T 4 HOH C 1 701 511 HOH HOH . 
T 4 HOH C 2 702 505 HOH HOH . 
T 4 HOH C 3 703 512 HOH HOH . 
T 4 HOH C 4 704 507 HOH HOH . 
T 4 HOH C 5 705 504 HOH HOH . 
T 4 HOH C 6 706 510 HOH HOH . 
T 4 HOH C 7 707 513 HOH HOH . 
T 4 HOH C 8 708 509 HOH HOH . 
T 4 HOH C 9 709 506 HOH HOH . 
T 4 HOH C 10 710 508 HOH HOH . 
T 4 HOH C 11 711 503 HOH HOH . 
U 4 HOH D 1 701 508 HOH HOH . 
U 4 HOH D 2 702 503 HOH HOH . 
U 4 HOH D 3 703 506 HOH HOH . 
U 4 HOH D 4 704 511 HOH HOH . 
U 4 HOH D 5 705 505 HOH HOH . 
U 4 HOH D 6 706 514 HOH HOH . 
U 4 HOH D 7 707 513 HOH HOH . 
U 4 HOH D 8 708 515 HOH HOH . 
U 4 HOH D 9 709 507 HOH HOH . 
U 4 HOH D 10 710 512 HOH HOH . 
U 4 HOH D 11 711 504 HOH HOH . 
U 4 HOH D 12 712 510 HOH HOH . 
U 4 HOH D 13 713 509 HOH HOH . 
V 4 HOH E 1 701 512 HOH HOH . 
V 4 HOH E 2 702 504 HOH HOH . 
V 4 HOH E 3 703 509 HOH HOH . 
V 4 HOH E 4 704 503 HOH HOH . 
V 4 HOH E 5 705 516 HOH HOH . 
V 4 HOH E 6 706 507 HOH HOH . 
V 4 HOH E 7 707 514 HOH HOH . 
V 4 HOH E 8 708 510 HOH HOH . 
V 4 HOH E 9 709 505 HOH HOH . 
V 4 HOH E 10 710 515 HOH HOH . 
V 4 HOH E 11 711 506 HOH HOH . 
V 4 HOH E 12 712 508 HOH HOH . 
V 4 HOH E 13 713 513 HOH HOH . 
V 4 HOH E 14 714 511 HOH HOH . 
W 4 HOH F 1 701 508 HOH HOH . 
W 4 HOH F 2 702 507 HOH HOH . 
W 4 HOH F 3 703 506 HOH HOH . 
W 4 HOH F 4 704 505 HOH HOH . 
W 4 HOH F 5 705 504 HOH HOH . 
X 4 HOH G 1 701 503 HOH HOH . 
X 4 HOH G 2 702 504 HOH HOH . 
Y 4 HOH H 1 701 504 HOH HOH . 
Y 4 HOH H 2 702 503 HOH HOH . 
Y 4 HOH H 3 703 503 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAI . . . L 2 35.237 -54.068 19.921 1 82.32 0 PA NAI 601 C 1 
HETATM 2 O O1A NAI . . . L 2 34.77 -54.274 18.519 1 81.21 0 O1A NAI 601 C 1 
HETATM 3 O O2A NAI . . . L 2 35.48 -52.662 20.354 1 85.27 0 O2A NAI 601 C 1 
HETATM 4 O O5B NAI . . . L 2 36.585 -54.908 20.154 1 79.77 0 O5B NAI 601 C 1 
HETATM 5 C C5B NAI . . . L 2 37.813 -54.481 19.503 1 76.63 0 C5B NAI 601 C 1 
HETATM 6 C C4B NAI . . . L 2 38.844 -54.101 20.54 1 75.17 0 C4B NAI 601 C 1 
HETATM 7 O O4B NAI . . . L 2 38.621 -52.729 20.954 1 73.13 0 O4B NAI 601 C 1 
HETATM 8 C C3B NAI . . . L 2 38.848 -54.92 21.839 1 74.26 0 C3B NAI 601 C 1 
HETATM 9 O O3B NAI . . . L 2 39.713 -56.043 21.73 1 75.18 0 O3B NAI 601 C 1 
HETATM 10 C C2B NAI . . . L 2 39.348 -53.903 22.869 1 71.69 0 C2B NAI 601 C 1 
HETATM 11 O O2B NAI . . . L 2 40.757 -53.822 22.902 1 68.24 0 O2B NAI 601 C 1 
HETATM 12 C C1B NAI . . . L 2 38.739 -52.601 22.354 1 71.06 0 C1B NAI 601 C 1 
HETATM 13 N N9A NAI . . . L 2 37.421 -52.28 22.896 1 69.47 0 N9A NAI 601 C 1 
HETATM 14 C C8A NAI . . . L 2 36.39 -53.149 23.159 1 68.79 0 C8A NAI 601 C 1 
HETATM 15 N N7A NAI . . . L 2 35.32 -52.562 23.633 1 68.29 0 N7A NAI 601 C 1 
HETATM 16 C C5A NAI . . . L 2 35.659 -51.218 23.685 1 66.72 0 C5A NAI 601 C 1 
HETATM 17 C C6A NAI . . . L 2 34.947 -50.077 24.105 1 65.12 0 C6A NAI 601 C 1 
HETATM 18 N N6A NAI . . . L 2 33.7 -50.115 24.563 1 65.98 0 N6A NAI 601 C 1 
HETATM 19 N N1A NAI . . . L 2 35.578 -48.881 24.033 1 63.95 0 N1A NAI 601 C 1 
HETATM 20 C C2A NAI . . . L 2 36.834 -48.852 23.568 1 65.19 0 C2A NAI 601 C 1 
HETATM 21 N N3A NAI . . . L 2 37.6 -49.855 23.146 1 66.47 0 N3A NAI 601 C 1 
HETATM 22 C C4A NAI . . . L 2 36.951 -51.03 23.231 1 67.83 0 C4A NAI 601 C 1 
HETATM 23 O O3 NAI . . . L 2 34.21 -54.792 20.936 1 88.78 0 O3 NAI 601 C 1 
HETATM 24 P PN NAI . . . L 2 32.681 -54.63 21.429 1 92.73 0 PN NAI 601 C 1 
HETATM 25 O O1N NAI . . . L 2 31.906 -53.848 20.421 1 92.11 0 O1N NAI 601 C 1 
HETATM 26 O O2N NAI . . . L 2 32.681 -54.146 22.843 1 89.85 0 O2N NAI 601 C 1 
HETATM 27 O O5D NAI . . . L 2 32.154 -56.144 21.402 1 90.41 0 O5D NAI 601 C 1 
HETATM 28 C C5D NAI . . . L 2 32.921 -57.176 22.064 1 88.72 0 C5D NAI 601 C 1 
HETATM 29 C C4D NAI . . . L 2 33.614 -58.024 21.026 1 88.21 0 C4D NAI 601 C 1 
HETATM 30 O O4D NAI . . . L 2 32.943 -57.899 19.744 1 86.94 0 O4D NAI 601 C 1 
HETATM 31 C C3D NAI . . . L 2 35.085 -57.669 20.762 1 88.06 0 C3D NAI 601 C 1 
HETATM 32 O O3D NAI . . . L 2 35.919 -58.776 21.076 1 92.3 0 O3D NAI 601 C 1 
HETATM 33 C C2D NAI . . . L 2 35.072 -57.279 19.277 1 86.4 0 C2D NAI 601 C 1 
HETATM 34 O O2D NAI . . . L 2 36.293 -57.542 18.599 1 86.15 0 O2D NAI 601 C 1 
HETATM 35 C C1D NAI . . . L 2 33.895 -58.075 18.723 1 84.81 0 C1D NAI 601 C 1 
HETATM 36 N N1N NAI . . . L 2 33.381 -57.558 17.412 1 79.3 0 N1N NAI 601 C 1 
HETATM 37 C C2N NAI . . . L 2 34.195 -56.853 16.567 1 77.32 0 C2N NAI 601 C 1 
HETATM 38 C C3N NAI . . . L 2 34.186 -57.107 15.226 1 73.86 0 C3N NAI 601 C 1 
HETATM 39 C C7N NAI . . . L 2 35.449 -56.852 14.476 1 71.81 0 C7N NAI 601 C 1 
HETATM 40 O O7N NAI . . . L 2 36.539 -57.122 14.995 1 69.01 0 O7N NAI 601 C 1 
HETATM 41 N N7N NAI . . . L 2 35.369 -56.33 13.26 1 69.35 0 N7N NAI 601 C 1 
HETATM 42 C C4N NAI . . . L 2 32.9 -57.625 14.657 1 71.49 0 C4N NAI 601 C 1 
HETATM 43 C C5N NAI . . . L 2 31.822 -57.725 15.674 1 70.84 0 C5N NAI 601 C 1 
HETATM 44 C C6N NAI . . . L 2 32.107 -57.83 16.959 1 74.22 0 C6N NAI 601 C 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    66 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           44 
#