data_8WFQ
#
_model_server_result.job_id            QCSndDZYXNynvc1XK-2idQ 
_model_server_result.datetime_utc      '2024-11-15 15:31:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wfq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":602}' 
#
_entry.id    8WFQ 
#
_exptl.entry_id    8WFQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.428 
_cell.angle_gamma         90 
_cell.entry_id            8WFQ 
_cell.length_a            101.343 
_cell.length_b            149.56 
_cell.length_c            125.076 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WFQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,I,J,K,L,M,R,S,T,U 1 1 
E,F,G,H,N,O,P,Q,V,W,X,Y 2 1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8WFQ 
_atom_sites.fract_transf_matrix[1][1]    0.009867 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000938 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006686 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008031 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 NAI A 1 601 502 NAI NAI . 
J 3 EDO A 1 602 503 EDO EDO . 
K 2 NAI B 1 601 502 NAI NAI . 
L 2 NAI C 1 601 502 NAI NAI . 
M 2 NAI D 1 601 502 NAI NAI . 
N 2 NAI E 1 601 502 NAI NAI . 
O 2 NAI F 1 601 502 NAI NAI . 
P 2 NAI G 1 601 502 NAI NAI . 
Q 2 NAI H 1 601 502 NAI NAI . 
R 4 HOH A 1 701 510 HOH HOH . 
R 4 HOH A 2 702 511 HOH HOH . 
R 4 HOH A 3 703 506 HOH HOH . 
R 4 HOH A 4 704 512 HOH HOH . 
R 4 HOH A 5 705 509 HOH HOH . 
R 4 HOH A 6 706 507 HOH HOH . 
R 4 HOH A 7 707 505 HOH HOH . 
R 4 HOH A 8 708 504 HOH HOH . 
R 4 HOH A 9 709 513 HOH HOH . 
R 4 HOH A 10 710 514 HOH HOH . 
R 4 HOH A 11 711 508 HOH HOH . 
S 4 HOH B 1 701 504 HOH HOH . 
S 4 HOH B 2 702 510 HOH HOH . 
S 4 HOH B 3 703 511 HOH HOH . 
S 4 HOH B 4 704 503 HOH HOH . 
S 4 HOH B 5 705 509 HOH HOH . 
S 4 HOH B 6 706 506 HOH HOH . 
S 4 HOH B 7 707 508 HOH HOH . 
S 4 HOH B 8 708 505 HOH HOH . 
S 4 HOH B 9 709 507 HOH HOH . 
T 4 HOH C 1 701 511 HOH HOH . 
T 4 HOH C 2 702 505 HOH HOH . 
T 4 HOH C 3 703 512 HOH HOH . 
T 4 HOH C 4 704 507 HOH HOH . 
T 4 HOH C 5 705 504 HOH HOH . 
T 4 HOH C 6 706 510 HOH HOH . 
T 4 HOH C 7 707 513 HOH HOH . 
T 4 HOH C 8 708 509 HOH HOH . 
T 4 HOH C 9 709 506 HOH HOH . 
T 4 HOH C 10 710 508 HOH HOH . 
T 4 HOH C 11 711 503 HOH HOH . 
U 4 HOH D 1 701 508 HOH HOH . 
U 4 HOH D 2 702 503 HOH HOH . 
U 4 HOH D 3 703 506 HOH HOH . 
U 4 HOH D 4 704 511 HOH HOH . 
U 4 HOH D 5 705 505 HOH HOH . 
U 4 HOH D 6 706 514 HOH HOH . 
U 4 HOH D 7 707 513 HOH HOH . 
U 4 HOH D 8 708 515 HOH HOH . 
U 4 HOH D 9 709 507 HOH HOH . 
U 4 HOH D 10 710 512 HOH HOH . 
U 4 HOH D 11 711 504 HOH HOH . 
U 4 HOH D 12 712 510 HOH HOH . 
U 4 HOH D 13 713 509 HOH HOH . 
V 4 HOH E 1 701 512 HOH HOH . 
V 4 HOH E 2 702 504 HOH HOH . 
V 4 HOH E 3 703 509 HOH HOH . 
V 4 HOH E 4 704 503 HOH HOH . 
V 4 HOH E 5 705 516 HOH HOH . 
V 4 HOH E 6 706 507 HOH HOH . 
V 4 HOH E 7 707 514 HOH HOH . 
V 4 HOH E 8 708 510 HOH HOH . 
V 4 HOH E 9 709 505 HOH HOH . 
V 4 HOH E 10 710 515 HOH HOH . 
V 4 HOH E 11 711 506 HOH HOH . 
V 4 HOH E 12 712 508 HOH HOH . 
V 4 HOH E 13 713 513 HOH HOH . 
V 4 HOH E 14 714 511 HOH HOH . 
W 4 HOH F 1 701 508 HOH HOH . 
W 4 HOH F 2 702 507 HOH HOH . 
W 4 HOH F 3 703 506 HOH HOH . 
W 4 HOH F 4 704 505 HOH HOH . 
W 4 HOH F 5 705 504 HOH HOH . 
X 4 HOH G 1 701 503 HOH HOH . 
X 4 HOH G 2 702 504 HOH HOH . 
Y 4 HOH H 1 701 504 HOH HOH . 
Y 4 HOH H 2 702 503 HOH HOH . 
Y 4 HOH H 3 703 503 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 3 55.637 -32.892 -58.871 1 37.18 0 C1 EDO 602 A 1 
HETATM 2 O O1 EDO . . . J 3 55.769 -31.51 -59.162 1 36.74 0 O1 EDO 602 A 1 
HETATM 3 C C2 EDO . . . J 3 56.937 -33.59 -58.687 1 37.07 0 C2 EDO 602 A 1 
HETATM 4 O O2 EDO . . . J 3 57.368 -33.635 -57.338 1 36.69 0 O2 EDO 602 A 1 
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_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    68 
_model_server_stats.query_time_ms           355 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           4 
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