data_8WG4
#
_model_server_result.job_id            nudFK-wzWM_yeZ2vayNiqw 
_model_server_result.datetime_utc      '2024-11-04 23:49:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wg4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1201}' 
#
_entry.id    8WG4 
#
_exptl.entry_id    8WG4 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8WG4 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WG4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 559 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
covale ? covale1 A C PHE 125 A PHE 125 1_555 A N P1L 126 A P1L 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale2 A C P1L 126 A P1L 126 1_555 A N SER 127 A SER 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                LBN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '(2R)-2-[(9Z)-9-Octadecenoyloxy]-3-(palmitoyloxy)propyl 2-(trimethylammonio)ethyl phosphate' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 N1 LBN sing 171 n n 
O3 P1 LBN sing 172 n n 
O2 C9 LBN sing 173 n n 
O2 P1 LBN sing 174 n n 
C9 C6 LBN sing 175 n n 
O4 P1 LBN doub 176 n n 
P1 O1 LBN sing 177 n n 
C6 N1 LBN sing 178 n n 
N1 C15 LBN sing 179 n n 
N1 C18 LBN sing 180 n n 
O1 C1 LBN sing 181 n n 
C2 C1 LBN sing 182 n n 
C2 C3 LBN sing 183 n n 
C2 O7 LBN sing 184 n n 
C3 O5 LBN sing 185 n n 
O6 C25 LBN doub 186 n n 
O5 C25 LBN sing 187 n n 
O7 C34 LBN sing 188 n n 
C25 C26 LBN sing 189 n n 
C34 C35 LBN sing 190 n n 
C34 O8 LBN doub 191 n n 
C26 C27 LBN sing 192 n n 
C35 C36 LBN sing 193 n n 
C27 C28 LBN sing 194 n n 
C36 C37 LBN sing 195 n n 
C28 C29 LBN sing 196 n n 
C37 C38 LBN sing 197 n n 
C29 C30 LBN sing 198 n n 
C39 C38 LBN sing 199 n n 
C39 C40 LBN sing 200 n n 
C41 C40 LBN sing 201 n n 
C41 C42 LBN sing 202 n n 
C30 C31 LBN sing 203 n n 
C42 C5 LBN doub 204 z n 
C31 C32 LBN sing 205 n n 
C5 C8 LBN sing 206 n n 
C8 C11 LBN sing 207 n n 
C32 C33 LBN sing 208 n n 
C11 C14 LBN sing 209 n n 
C33 C4 LBN sing 210 n n 
C14 C17 LBN sing 211 n n 
C4 C7 LBN sing 212 n n 
C17 C20 LBN sing 213 n n 
C7 C10 LBN sing 214 n n 
C20 C22 LBN sing 215 n n 
C10 C13 LBN sing 216 n n 
C22 C23 LBN sing 217 n n 
C13 C16 LBN sing 218 n n 
C23 C24 LBN sing 219 n n 
C16 C19 LBN sing 220 n n 
C19 C21 LBN sing 221 n n 
C1 H1 LBN sing 222 n n 
C1 H2 LBN sing 223 n n 
C2 H3 LBN sing 224 n n 
C3 H4 LBN sing 225 n n 
C3 H5 LBN sing 226 n n 
C4 H6 LBN sing 227 n n 
C4 H7 LBN sing 228 n n 
C5 H8 LBN sing 229 n n 
C6 H9 LBN sing 230 n n 
C6 H10 LBN sing 231 n n 
C7 H11 LBN sing 232 n n 
C7 H12 LBN sing 233 n n 
C8 H13 LBN sing 234 n n 
C8 H14 LBN sing 235 n n 
C9 H15 LBN sing 236 n n 
C9 H16 LBN sing 237 n n 
C10 H17 LBN sing 238 n n 
C10 H18 LBN sing 239 n n 
C11 H19 LBN sing 240 n n 
C12 H20 LBN sing 241 n n 
C12 H21 LBN sing 242 n n 
C12 H22 LBN sing 243 n n 
C13 H23 LBN sing 244 n n 
C13 H24 LBN sing 245 n n 
C14 H25 LBN sing 246 n n 
C15 H26 LBN sing 247 n n 
C15 H27 LBN sing 248 n n 
C15 H28 LBN sing 249 n n 
C16 H30 LBN sing 250 n n 
C16 H31 LBN sing 251 n n 
C17 H32 LBN sing 252 n n 
C17 H33 LBN sing 253 n n 
C18 H34 LBN sing 254 n n 
C18 H35 LBN sing 255 n n 
C18 H36 LBN sing 256 n n 
C19 H37 LBN sing 257 n n 
C19 H38 LBN sing 258 n n 
C20 H39 LBN sing 259 n n 
C20 H40 LBN sing 260 n n 
C21 H41 LBN sing 261 n n 
C21 H42 LBN sing 262 n n 
C21 H43 LBN sing 263 n n 
C22 H44 LBN sing 264 n n 
C22 H45 LBN sing 265 n n 
C23 H46 LBN sing 266 n n 
C23 H47 LBN sing 267 n n 
C24 H48 LBN sing 268 n n 
C24 H49 LBN sing 269 n n 
C24 H50 LBN sing 270 n n 
C26 H51 LBN sing 271 n n 
C26 H52 LBN sing 272 n n 
C27 H53 LBN sing 273 n n 
C27 H54 LBN sing 274 n n 
C28 H55 LBN sing 275 n n 
C28 H56 LBN sing 276 n n 
C29 H57 LBN sing 277 n n 
C29 H58 LBN sing 278 n n 
C30 H59 LBN sing 279 n n 
C30 H60 LBN sing 280 n n 
C31 H61 LBN sing 281 n n 
C31 H62 LBN sing 282 n n 
C32 H63 LBN sing 283 n n 
C32 H64 LBN sing 284 n n 
C33 H65 LBN sing 285 n n 
C33 H66 LBN sing 286 n n 
C35 H67 LBN sing 287 n n 
C35 H68 LBN sing 288 n n 
C36 H69 LBN sing 289 n n 
C36 H70 LBN sing 290 n n 
C37 H71 LBN sing 291 n n 
C37 H72 LBN sing 292 n n 
C38 H73 LBN sing 293 n n 
C38 H74 LBN sing 294 n n 
C39 H75 LBN sing 295 n n 
C40 H76 LBN sing 296 n n 
C41 H77 LBN sing 297 n n 
C41 H78 LBN sing 298 n n 
C42 H79 LBN sing 299 n n 
C11 H80 LBN sing 300 n n 
C14 H81 LBN sing 301 n n 
C39 H82 LBN sing 302 n n 
C40 H83 LBN sing 303 n n 
#
_atom_sites.entry_id                     8WG4 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 LBN A 1 1201 801 LBN LBN . 
C 3 Y01 A 1 1202 802 Y01 Y01 . 
D 3 Y01 A 1 1203 803 Y01 Y01 . 
E 3 Y01 A 1 1204 804 Y01 Y01 . 
F 3 Y01 A 1 1205 805 Y01 Y01 . 
G 3 Y01 A 1 1206 806 Y01 Y01 . 
H 3 Y01 A 1 1207 807 Y01 Y01 . 
I 3 Y01 A 1 1208 808 Y01 Y01 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 LBN . . . B 2 133.227 111.792 133.814 1 170.78 ? C1 LBN 1201 A 1 
HETATM 2 N N1 LBN . . . B 2 134.925 107.772 136.687 1 93.56 ? N1 LBN 1201 A 1 
HETATM 3 P P1 LBN . . . B 2 135.668 111.873 134.841 1 150.24 ? P1 LBN 1201 A 1 
HETATM 4 C C2 LBN . . . B 2 132.574 111.117 132.625 1 164.46 ? C2 LBN 1201 A 1 
HETATM 5 C C3 LBN . . . B 2 131.598 110.035 133.035 1 145.2 ? C3 LBN 1201 A 1 
HETATM 6 C C5 LBN . . . B 2 123.524 113.783 127.442 1 134.25 ? C5 LBN 1201 A 1 
HETATM 7 C C6 LBN . . . B 2 135.581 107.98 135.34 1 126.2 ? C6 LBN 1201 A 1 
HETATM 8 O O1 LBN . . . B 2 134.653 111.933 133.594 1 171.25 ? O1 LBN 1201 A 1 
HETATM 9 C C8 LBN . . . B 2 122.361 114.007 128.36 1 125.03 ? C8 LBN 1201 A 1 
HETATM 10 C C9 LBN . . . B 2 135.242 109.262 134.618 1 157.61 ? C9 LBN 1201 A 1 
HETATM 11 O O2 LBN . . . B 2 135.442 110.418 135.49 1 157.13 ? O2 LBN 1201 A 1 
HETATM 12 C C11 LBN . . . B 2 121.042 113.791 127.688 1 129.5 ? C11 LBN 1201 A 1 
HETATM 13 C C12 LBN . . . B 2 135.733 108.399 137.711 1 74.74 ? C12 LBN 1201 A 1 
HETATM 14 O O3 LBN . . . B 2 135.234 112.866 135.874 1 126.03 ? O3 LBN 1201 A 1 
HETATM 15 C C14 LBN . . . B 2 119.88 113.504 128.63 1 126.89 ? C14 LBN 1201 A 1 
HETATM 16 C C15 LBN . . . B 2 134.827 106.303 136.978 1 101.15 ? C15 LBN 1201 A 1 
HETATM 17 O O4 LBN . . . B 2 137.055 111.897 134.275 1 179.4 ? O4 LBN 1201 A 1 
HETATM 18 C C17 LBN . . . B 2 118.526 113.902 128.085 1 125.84 ? C17 LBN 1201 A 1 
HETATM 19 C C18 LBN . . . B 2 133.58 108.392 136.722 1 82.02 ? C18 LBN 1201 A 1 
HETATM 20 C C20 LBN . . . B 2 118.249 113.435 126.671 1 130.11 ? C20 LBN 1201 A 1 
HETATM 21 C C22 LBN . . . B 2 117.037 114.074 126.041 1 136.46 ? C22 LBN 1201 A 1 
HETATM 22 C C23 LBN . . . B 2 115.702 113.438 126.381 1 153.01 ? C23 LBN 1201 A 1 
HETATM 23 C C24 LBN . . . B 2 115.248 113.631 127.817 1 161.1 ? C24 LBN 1201 A 1 
HETATM 24 C C25 LBN . . . B 2 129.427 110.716 133.705 1 99.94 ? C25 LBN 1201 A 1 
HETATM 25 O O5 LBN . . . B 2 130.717 110.646 134 1 124.25 ? O5 LBN 1201 A 1 
HETATM 26 C C26 LBN . . . B 2 128.926 112.095 133.897 1 97.6 ? C26 LBN 1201 A 1 
HETATM 27 O O6 LBN . . . B 2 128.804 109.85 133.151 1 112.51 ? O6 LBN 1201 A 1 
HETATM 28 C C27 LBN . . . B 2 127.506 112.279 133.443 1 104.49 ? C27 LBN 1201 A 1 
HETATM 29 C C28 LBN . . . B 2 126.516 111.425 134.231 1 111.02 ? C28 LBN 1201 A 1 
HETATM 30 C C29 LBN . . . B 2 125.18 112.082 134.477 1 123.92 ? C29 LBN 1201 A 1 
HETATM 31 C C30 LBN . . . B 2 124.215 111.963 133.32 1 133.22 ? C30 LBN 1201 A 1 
HETATM 32 C C31 LBN . . . B 2 122.849 112.524 133.621 1 121.31 ? C31 LBN 1201 A 1 
HETATM 33 C C32 LBN . . . B 2 121.784 112.238 132.607 1 117.57 ? C32 LBN 1201 A 1 
HETATM 34 C C33 LBN . . . B 2 120.578 113.139 132.725 1 128.56 ? C33 LBN 1201 A 1 
HETATM 35 C C34 LBN . . . B 2 132.498 113.101 131.252 1 151.53 ? C34 LBN 1201 A 1 
HETATM 36 O O7 LBN . . . B 2 131.845 112.048 131.769 1 163.87 ? O7 LBN 1201 A 1 
HETATM 37 C C35 LBN . . . B 2 132.016 113.45 129.872 1 132.3 ? C35 LBN 1201 A 1 
HETATM 38 O O8 LBN . . . B 2 133.328 113.733 131.856 1 152.02 ? O8 LBN 1201 A 1 
HETATM 39 C C36 LBN . . . B 2 130.589 113.872 129.781 1 109.94 ? C36 LBN 1201 A 1 
HETATM 40 C C37 LBN . . . B 2 129.724 112.862 129.06 1 114.41 ? C37 LBN 1201 A 1 
HETATM 41 C C38 LBN . . . B 2 128.703 113.485 128.149 1 120.72 ? C38 LBN 1201 A 1 
HETATM 42 C C39 LBN . . . B 2 127.547 114.08 128.87 1 132.14 ? C39 LBN 1201 A 1 
HETATM 43 C C40 LBN . . . B 2 126.583 113.039 129.424 1 135.49 ? C40 LBN 1201 A 1 
HETATM 44 C C41 LBN . . . B 2 125.152 113.407 129.263 1 138.65 ? C41 LBN 1201 A 1 
HETATM 45 C C42 LBN . . . B 2 124.747 113.557 127.831 1 139.69 ? C42 LBN 1201 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           45 
#