data_8WGD
#
_model_server_result.job_id            15UnFnImBY5fFLj1PfOb7w 
_model_server_result.datetime_utc      '2024-12-23 05:49:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wgd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1001}' 
#
_entry.id    8WGD 
#
_exptl.entry_id    8WGD 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              271.206 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-2-azanyl-2-cyclopropyl-2-(4-phosphonophenyl)ethanoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C11 H14 N O5 P' 
_chem_comp.formula_weight    271.206 
_chem_comp.id                WA6 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-2-azanyl-2-cyclopropyl-2-(4-phosphonophenyl)ethanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O03 C13 WA6 doub 374 n n 
C13 O02 WA6 sing 375 n n 
C13 C11 WA6 sing 376 n n 
C09 C08 WA6 sing 377 n n 
C09 C10 WA6 sing 378 n n 
C08 C11 WA6 sing 379 n n 
C08 C10 WA6 sing 380 n n 
C11 N07 WA6 sing 381 n n 
C11 C12 WA6 sing 382 n n 
C12 C15 WA6 doub 383 n y 
C12 C14 WA6 sing 384 n y 
C15 C17 WA6 sing 385 n y 
C14 C16 WA6 doub 386 n y 
C17 C18 WA6 doub 387 n y 
C16 C18 WA6 sing 388 n y 
C18 P01 WA6 sing 389 n n 
O05 P01 WA6 doub 390 n n 
P01 O04 WA6 sing 391 n n 
P01 O06 WA6 sing 392 n n 
O02 H1 WA6 sing 393 n n 
O04 H2 WA6 sing 394 n n 
O06 H3 WA6 sing 395 n n 
N07 H4 WA6 sing 396 n n 
N07 H5 WA6 sing 397 n n 
C08 H7 WA6 sing 398 n n 
C09 H8 WA6 sing 399 n n 
C09 H9 WA6 sing 400 n n 
C10 H10 WA6 sing 401 n n 
C10 H11 WA6 sing 402 n n 
C14 H12 WA6 sing 403 n n 
C15 H13 WA6 sing 404 n n 
C16 H14 WA6 sing 405 n n 
C17 H15 WA6 sing 406 n n 
#
_atom_sites.entry_id                     8WGD 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 WAG C 1 901 1 WAG LY3 . 
D 4 WA6 B 1 1001 1 WA6 CPP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P01 WA6 . . . D 4 186.01 213.601 115.338 1 20 ? P01 WA6 1001 B 1 
HETATM 2 O O02 WA6 . . . D 4 187.591 214.086 108.924 1 20 ? O02 WA6 1001 B 1 
HETATM 3 O O03 WA6 . . . D 4 188.346 212.644 107.454 1 20 ? O03 WA6 1001 B 1 
HETATM 4 O O04 WA6 . . . D 4 185.97 215.097 115.549 1 20 ? O04 WA6 1001 B 1 
HETATM 5 O O05 WA6 . . . D 4 184.601 213.064 115.322 1 20 ? O05 WA6 1001 B 1 
HETATM 6 O O06 WA6 . . . D 4 186.805 212.966 116.45 1 20 ? O06 WA6 1001 B 1 
HETATM 7 N N07 WA6 . . . D 4 190.341 212.752 109.818 1 20 ? N07 WA6 1001 B 1 
HETATM 8 C C08 WA6 . . . D 4 188.874 210.791 109.456 1 20 ? C08 WA6 1001 B 1 
HETATM 9 C C09 WA6 . . . D 4 190.176 210.02 109.22 1 20 ? C09 WA6 1001 B 1 
HETATM 10 C C10 WA6 . . . D 4 189.45 209.915 110.566 1 20 ? C10 WA6 1001 B 1 
HETATM 11 C C11 WA6 . . . D 4 188.953 212.29 109.752 1 20 ? C11 WA6 1001 B 1 
HETATM 12 C C12 WA6 . . . D 4 188.246 212.586 111.074 1 20 ? C12 WA6 1001 B 1 
HETATM 13 C C13 WA6 . . . D 4 188.255 213.051 108.645 1 20 ? C13 WA6 1001 B 1 
HETATM 14 C C14 WA6 . . . D 4 188.695 213.779 111.915 1 20 ? C14 WA6 1001 B 1 
HETATM 15 C C15 WA6 . . . D 4 187.093 211.702 111.552 1 20 ? C15 WA6 1001 B 1 
HETATM 16 C C16 WA6 . . . D 4 187.998 214.087 113.239 1 20 ? C16 WA6 1001 B 1 
HETATM 17 C C17 WA6 . . . D 4 186.394 212.011 112.876 1 20 ? C17 WA6 1001 B 1 
HETATM 18 C C18 WA6 . . . D 4 186.847 213.205 113.718 1 20 ? C18 WA6 1001 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           416 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           18 
#