data_8WGQ
#
_model_server_result.job_id            TCyTwUoOQCbxbk3BvzQGtQ 
_model_server_result.datetime_utc      '2024-11-24 22:28:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wgq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":402}' 
#
_entry.id    8WGQ 
#
_exptl.entry_id    8WGQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8WGQ 
_cell.length_a            133.223 
_cell.length_b            133.223 
_cell.length_c            166.786 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WGQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 K N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 70 n n 
C1 C2 EDO sing 71 n n 
C1 H11 EDO sing 72 n n 
C1 H12 EDO sing 73 n n 
O1 HO1 EDO sing 74 n n 
C2 O2 EDO sing 75 n n 
C2 H21 EDO sing 76 n n 
C2 H22 EDO sing 77 n n 
O2 HO2 EDO sing 78 n n 
#
_atom_sites.entry_id                     8WGQ 
_atom_sites.fract_transf_matrix[1][1]    0.007506 
_atom_sites.fract_transf_matrix[1][2]    0.004334 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008667 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005996 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 GOL A 1 401 1 GOL GOL . 
F 3 EDO A 1 402 3 EDO EDO . 
G 3 EDO A 1 403 5 EDO EDO . 
H 3 EDO B 1 401 1 EDO EDO . 
I 3 EDO B 1 402 4 EDO EDO . 
J 2 GOL D 1 401 2 GOL GOL . 
K 3 EDO D 1 402 2 EDO EDO . 
L 4 HOH A 1 501 194 HOH HOH . 
L 4 HOH A 2 502 1 HOH HOH . 
L 4 HOH A 3 503 12 HOH HOH . 
L 4 HOH A 4 504 182 HOH HOH . 
L 4 HOH A 5 505 169 HOH HOH . 
L 4 HOH A 6 506 7 HOH HOH . 
L 4 HOH A 7 507 175 HOH HOH . 
L 4 HOH A 8 508 48 HOH HOH . 
L 4 HOH A 9 509 39 HOH HOH . 
L 4 HOH A 10 510 20 HOH HOH . 
L 4 HOH A 11 511 44 HOH HOH . 
L 4 HOH A 12 512 31 HOH HOH . 
L 4 HOH A 13 513 109 HOH HOH . 
L 4 HOH A 14 514 45 HOH HOH . 
L 4 HOH A 15 515 63 HOH HOH . 
L 4 HOH A 16 516 60 HOH HOH . 
L 4 HOH A 17 517 73 HOH HOH . 
L 4 HOH A 18 518 16 HOH HOH . 
L 4 HOH A 19 519 52 HOH HOH . 
L 4 HOH A 20 520 13 HOH HOH . 
L 4 HOH A 21 521 156 HOH HOH . 
L 4 HOH A 22 522 138 HOH HOH . 
L 4 HOH A 23 523 158 HOH HOH . 
L 4 HOH A 24 524 105 HOH HOH . 
L 4 HOH A 25 525 74 HOH HOH . 
L 4 HOH A 26 526 77 HOH HOH . 
L 4 HOH A 27 527 137 HOH HOH . 
L 4 HOH A 28 528 51 HOH HOH . 
L 4 HOH A 29 529 28 HOH HOH . 
L 4 HOH A 30 530 64 HOH HOH . 
L 4 HOH A 31 531 26 HOH HOH . 
L 4 HOH A 32 532 170 HOH HOH . 
L 4 HOH A 33 533 58 HOH HOH . 
L 4 HOH A 34 534 53 HOH HOH . 
L 4 HOH A 35 535 55 HOH HOH . 
L 4 HOH A 36 536 35 HOH HOH . 
L 4 HOH A 37 537 56 HOH HOH . 
L 4 HOH A 38 538 46 HOH HOH . 
L 4 HOH A 39 539 198 HOH HOH . 
L 4 HOH A 40 540 50 HOH HOH . 
L 4 HOH A 41 541 161 HOH HOH . 
L 4 HOH A 42 542 61 HOH HOH . 
L 4 HOH A 43 543 193 HOH HOH . 
L 4 HOH A 44 544 75 HOH HOH . 
L 4 HOH A 45 545 62 HOH HOH . 
L 4 HOH A 46 546 40 HOH HOH . 
L 4 HOH A 47 547 162 HOH HOH . 
L 4 HOH A 48 548 166 HOH HOH . 
L 4 HOH A 49 549 32 HOH HOH . 
L 4 HOH A 50 550 174 HOH HOH . 
L 4 HOH A 51 551 72 HOH HOH . 
L 4 HOH A 52 552 148 HOH HOH . 
L 4 HOH A 53 553 18 HOH HOH . 
L 4 HOH A 54 554 34 HOH HOH . 
L 4 HOH A 55 555 19 HOH HOH . 
L 4 HOH A 56 556 47 HOH HOH . 
L 4 HOH A 57 557 144 HOH HOH . 
L 4 HOH A 58 558 43 HOH HOH . 
L 4 HOH A 59 559 190 HOH HOH . 
L 4 HOH A 60 560 163 HOH HOH . 
L 4 HOH A 61 561 36 HOH HOH . 
L 4 HOH A 62 562 168 HOH HOH . 
L 4 HOH A 63 563 33 HOH HOH . 
L 4 HOH A 64 564 17 HOH HOH . 
L 4 HOH A 65 565 38 HOH HOH . 
L 4 HOH A 66 566 78 HOH HOH . 
L 4 HOH A 67 567 145 HOH HOH . 
L 4 HOH A 68 568 157 HOH HOH . 
L 4 HOH A 69 569 68 HOH HOH . 
L 4 HOH A 70 570 70 HOH HOH . 
L 4 HOH A 71 571 189 HOH HOH . 
L 4 HOH A 72 572 167 HOH HOH . 
M 4 HOH B 1 501 160 HOH HOH . 
M 4 HOH B 2 502 155 HOH HOH . 
M 4 HOH B 3 503 89 HOH HOH . 
M 4 HOH B 4 504 176 HOH HOH . 
M 4 HOH B 5 505 4 HOH HOH . 
M 4 HOH B 6 506 143 HOH HOH . 
M 4 HOH B 7 507 173 HOH HOH . 
M 4 HOH B 8 508 130 HOH HOH . 
M 4 HOH B 9 509 205 HOH HOH . 
M 4 HOH B 10 510 87 HOH HOH . 
M 4 HOH B 11 511 149 HOH HOH . 
M 4 HOH B 12 512 192 HOH HOH . 
M 4 HOH B 13 513 191 HOH HOH . 
M 4 HOH B 14 514 2 HOH HOH . 
M 4 HOH B 15 515 178 HOH HOH . 
M 4 HOH B 16 516 86 HOH HOH . 
M 4 HOH B 17 517 25 HOH HOH . 
M 4 HOH B 18 518 94 HOH HOH . 
M 4 HOH B 19 519 95 HOH HOH . 
M 4 HOH B 20 520 82 HOH HOH . 
M 4 HOH B 21 521 14 HOH HOH . 
M 4 HOH B 22 522 92 HOH HOH . 
M 4 HOH B 23 523 83 HOH HOH . 
M 4 HOH B 24 524 159 HOH HOH . 
M 4 HOH B 25 525 139 HOH HOH . 
M 4 HOH B 26 526 195 HOH HOH . 
M 4 HOH B 27 527 93 HOH HOH . 
M 4 HOH B 28 528 49 HOH HOH . 
M 4 HOH B 29 529 57 HOH HOH . 
M 4 HOH B 30 530 59 HOH HOH . 
M 4 HOH B 31 531 96 HOH HOH . 
M 4 HOH B 32 532 147 HOH HOH . 
M 4 HOH B 33 533 24 HOH HOH . 
M 4 HOH B 34 534 142 HOH HOH . 
M 4 HOH B 35 535 11 HOH HOH . 
M 4 HOH B 36 536 201 HOH HOH . 
M 4 HOH B 37 537 84 HOH HOH . 
M 4 HOH B 38 538 71 HOH HOH . 
M 4 HOH B 39 539 27 HOH HOH . 
M 4 HOH B 40 540 85 HOH HOH . 
M 4 HOH B 41 541 91 HOH HOH . 
M 4 HOH B 42 542 141 HOH HOH . 
M 4 HOH B 43 543 171 HOH HOH . 
M 4 HOH B 44 544 76 HOH HOH . 
M 4 HOH B 45 545 200 HOH HOH . 
M 4 HOH B 46 546 79 HOH HOH . 
M 4 HOH B 47 547 183 HOH HOH . 
M 4 HOH B 48 548 65 HOH HOH . 
M 4 HOH B 49 549 80 HOH HOH . 
M 4 HOH B 50 550 135 HOH HOH . 
N 4 HOH C 1 401 8 HOH HOH . 
N 4 HOH C 2 402 187 HOH HOH . 
N 4 HOH C 3 403 3 HOH HOH . 
N 4 HOH C 4 404 101 HOH HOH . 
N 4 HOH C 5 405 188 HOH HOH . 
N 4 HOH C 6 406 172 HOH HOH . 
N 4 HOH C 7 407 128 HOH HOH . 
N 4 HOH C 8 408 99 HOH HOH . 
N 4 HOH C 9 409 9 HOH HOH . 
N 4 HOH C 10 410 29 HOH HOH . 
N 4 HOH C 11 411 10 HOH HOH . 
N 4 HOH C 12 412 98 HOH HOH . 
N 4 HOH C 13 413 41 HOH HOH . 
N 4 HOH C 14 414 5 HOH HOH . 
N 4 HOH C 15 415 114 HOH HOH . 
N 4 HOH C 16 416 81 HOH HOH . 
N 4 HOH C 17 417 180 HOH HOH . 
N 4 HOH C 18 418 204 HOH HOH . 
N 4 HOH C 19 419 119 HOH HOH . 
N 4 HOH C 20 420 199 HOH HOH . 
N 4 HOH C 21 421 103 HOH HOH . 
N 4 HOH C 22 422 184 HOH HOH . 
N 4 HOH C 23 423 136 HOH HOH . 
N 4 HOH C 24 424 164 HOH HOH . 
N 4 HOH C 25 425 179 HOH HOH . 
N 4 HOH C 26 426 196 HOH HOH . 
N 4 HOH C 27 427 118 HOH HOH . 
N 4 HOH C 28 428 186 HOH HOH . 
N 4 HOH C 29 429 115 HOH HOH . 
N 4 HOH C 30 430 113 HOH HOH . 
N 4 HOH C 31 431 104 HOH HOH . 
N 4 HOH C 32 432 154 HOH HOH . 
N 4 HOH C 33 433 116 HOH HOH . 
N 4 HOH C 34 434 202 HOH HOH . 
N 4 HOH C 35 435 102 HOH HOH . 
N 4 HOH C 36 436 97 HOH HOH . 
N 4 HOH C 37 437 132 HOH HOH . 
N 4 HOH C 38 438 165 HOH HOH . 
N 4 HOH C 39 439 133 HOH HOH . 
N 4 HOH C 40 440 134 HOH HOH . 
N 4 HOH C 41 441 117 HOH HOH . 
N 4 HOH C 42 442 185 HOH HOH . 
N 4 HOH C 43 443 146 HOH HOH . 
N 4 HOH C 44 444 153 HOH HOH . 
N 4 HOH C 45 445 177 HOH HOH . 
N 4 HOH C 46 446 42 HOH HOH . 
N 4 HOH C 47 447 131 HOH HOH . 
O 4 HOH D 1 501 23 HOH HOH . 
O 4 HOH D 2 502 30 HOH HOH . 
O 4 HOH D 3 503 6 HOH HOH . 
O 4 HOH D 4 504 22 HOH HOH . 
O 4 HOH D 5 505 127 HOH HOH . 
O 4 HOH D 6 506 111 HOH HOH . 
O 4 HOH D 7 507 110 HOH HOH . 
O 4 HOH D 8 508 54 HOH HOH . 
O 4 HOH D 9 509 129 HOH HOH . 
O 4 HOH D 10 510 140 HOH HOH . 
O 4 HOH D 11 511 90 HOH HOH . 
O 4 HOH D 12 512 15 HOH HOH . 
O 4 HOH D 13 513 106 HOH HOH . 
O 4 HOH D 14 514 126 HOH HOH . 
O 4 HOH D 15 515 197 HOH HOH . 
O 4 HOH D 16 516 37 HOH HOH . 
O 4 HOH D 17 517 69 HOH HOH . 
O 4 HOH D 18 518 21 HOH HOH . 
O 4 HOH D 19 519 150 HOH HOH . 
O 4 HOH D 20 520 122 HOH HOH . 
O 4 HOH D 21 521 108 HOH HOH . 
O 4 HOH D 22 522 124 HOH HOH . 
O 4 HOH D 23 523 100 HOH HOH . 
O 4 HOH D 24 524 107 HOH HOH . 
O 4 HOH D 25 525 123 HOH HOH . 
O 4 HOH D 26 526 88 HOH HOH . 
O 4 HOH D 27 527 203 HOH HOH . 
O 4 HOH D 28 528 67 HOH HOH . 
O 4 HOH D 29 529 151 HOH HOH . 
O 4 HOH D 30 530 121 HOH HOH . 
O 4 HOH D 31 531 66 HOH HOH . 
O 4 HOH D 32 532 152 HOH HOH . 
O 4 HOH D 33 533 125 HOH HOH . 
O 4 HOH D 34 534 112 HOH HOH . 
O 4 HOH D 35 535 181 HOH HOH . 
O 4 HOH D 36 536 120 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . I 3 -43.753 84.851 9.597 1 98.36 0 C1 EDO 402 B 1 
HETATM 2 O O1 EDO . . . I 3 -42.773 83.94 10.074 1 91.67 0 O1 EDO 402 B 1 
HETATM 3 C C2 EDO . . . I 3 -44.095 84.669 8.157 1 96.53 0 C2 EDO 402 B 1 
HETATM 4 O O2 EDO . . . I 3 -45.222 83.825 7.944 1 93.75 0 O2 EDO 402 B 1 
#
_model_server_stats.io_time_ms              45 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           210 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#