data_8WHI # _model_server_result.job_id pFlUJ7NUzyUbQu4AC3eByA _model_server_result.datetime_utc '2024-11-22 00:19:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8whi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1501}' # _entry.id 8WHI # _exptl.entry_id 8WHI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8WHI _cell.length_a 52.624 _cell.length_b 85.545 _cell.length_c 114.195 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8WHI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 246 n n C1 C2 PEG sing 247 n n C1 H11 PEG sing 248 n n C1 H12 PEG sing 249 n n O1 HO1 PEG sing 250 n n C2 O2 PEG sing 251 n n C2 H21 PEG sing 252 n n C2 H22 PEG sing 253 n n O2 C3 PEG sing 254 n n C3 C4 PEG sing 255 n n C3 H31 PEG sing 256 n n C3 H32 PEG sing 257 n n C4 O4 PEG sing 258 n n C4 H41 PEG sing 259 n n C4 H42 PEG sing 260 n n O4 HO4 PEG sing 261 n n # _atom_sites.entry_id 8WHI _atom_sites.fract_transf_matrix[1][1] 0.019003 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01169 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008757 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 PEG A 1 1501 1 PEG PEG . E 4 EDO A 1 1502 1 EDO EDO . F 4 EDO A 1 1503 2 EDO EDO . G 4 EDO A 1 1504 3 EDO EDO . H 5 HOH A 1 1601 228 HOH HOH . H 5 HOH A 2 1602 122 HOH HOH . H 5 HOH A 3 1603 129 HOH HOH . H 5 HOH A 4 1604 50 HOH HOH . H 5 HOH A 5 1605 57 HOH HOH . H 5 HOH A 6 1606 163 HOH HOH . H 5 HOH A 7 1607 32 HOH HOH . H 5 HOH A 8 1608 41 HOH HOH . H 5 HOH A 9 1609 45 HOH HOH . H 5 HOH A 10 1610 161 HOH HOH . H 5 HOH A 11 1611 103 HOH HOH . H 5 HOH A 12 1612 255 HOH HOH . H 5 HOH A 13 1613 120 HOH HOH . H 5 HOH A 14 1614 220 HOH HOH . H 5 HOH A 15 1615 194 HOH HOH . H 5 HOH A 16 1616 5 HOH HOH . H 5 HOH A 17 1617 208 HOH HOH . H 5 HOH A 18 1618 141 HOH HOH . H 5 HOH A 19 1619 56 HOH HOH . H 5 HOH A 20 1620 60 HOH HOH . H 5 HOH A 21 1621 188 HOH HOH . H 5 HOH A 22 1622 2 HOH HOH . H 5 HOH A 23 1623 176 HOH HOH . H 5 HOH A 24 1624 231 HOH HOH . H 5 HOH A 25 1625 36 HOH HOH . H 5 HOH A 26 1626 38 HOH HOH . H 5 HOH A 27 1627 37 HOH HOH . H 5 HOH A 28 1628 14 HOH HOH . H 5 HOH A 29 1629 10 HOH HOH . H 5 HOH A 30 1630 159 HOH HOH . H 5 HOH A 31 1631 222 HOH HOH . H 5 HOH A 32 1632 256 HOH HOH . H 5 HOH A 33 1633 173 HOH HOH . H 5 HOH A 34 1634 34 HOH HOH . H 5 HOH A 35 1635 11 HOH HOH . H 5 HOH A 36 1636 85 HOH HOH . H 5 HOH A 37 1637 63 HOH HOH . H 5 HOH A 38 1638 86 HOH HOH . H 5 HOH A 39 1639 145 HOH HOH . H 5 HOH A 40 1640 48 HOH HOH . H 5 HOH A 41 1641 180 HOH HOH . H 5 HOH A 42 1642 207 HOH HOH . H 5 HOH A 43 1643 241 HOH HOH . H 5 HOH A 44 1644 240 HOH HOH . H 5 HOH A 45 1645 62 HOH HOH . H 5 HOH A 46 1646 94 HOH HOH . H 5 HOH A 47 1647 22 HOH HOH . H 5 HOH A 48 1648 211 HOH HOH . H 5 HOH A 49 1649 89 HOH HOH . H 5 HOH A 50 1650 83 HOH HOH . H 5 HOH A 51 1651 3 HOH HOH . H 5 HOH A 52 1652 113 HOH HOH . H 5 HOH A 53 1653 224 HOH HOH . H 5 HOH A 54 1654 29 HOH HOH . H 5 HOH A 55 1655 155 HOH HOH . H 5 HOH A 56 1656 1 HOH HOH . H 5 HOH A 57 1657 198 HOH HOH . H 5 HOH A 58 1658 42 HOH HOH . H 5 HOH A 59 1659 243 HOH HOH . H 5 HOH A 60 1660 84 HOH HOH . H 5 HOH A 61 1661 46 HOH HOH . H 5 HOH A 62 1662 33 HOH HOH . H 5 HOH A 63 1663 40 HOH HOH . H 5 HOH A 64 1664 28 HOH HOH . H 5 HOH A 65 1665 30 HOH HOH . H 5 HOH A 66 1666 20 HOH HOH . H 5 HOH A 67 1667 15 HOH HOH . H 5 HOH A 68 1668 64 HOH HOH . H 5 HOH A 69 1669 35 HOH HOH . H 5 HOH A 70 1670 68 HOH HOH . H 5 HOH A 71 1671 185 HOH HOH . H 5 HOH A 72 1672 146 HOH HOH . H 5 HOH A 73 1673 31 HOH HOH . H 5 HOH A 74 1674 18 HOH HOH . H 5 HOH A 75 1675 151 HOH HOH . H 5 HOH A 76 1676 227 HOH HOH . H 5 HOH A 77 1677 93 HOH HOH . H 5 HOH A 78 1678 170 HOH HOH . H 5 HOH A 79 1679 49 HOH HOH . H 5 HOH A 80 1680 54 HOH HOH . H 5 HOH A 81 1681 52 HOH HOH . H 5 HOH A 82 1682 39 HOH HOH . H 5 HOH A 83 1683 152 HOH HOH . H 5 HOH A 84 1684 55 HOH HOH . H 5 HOH A 85 1685 234 HOH HOH . H 5 HOH A 86 1686 148 HOH HOH . H 5 HOH A 87 1687 121 HOH HOH . H 5 HOH A 88 1688 119 HOH HOH . H 5 HOH A 89 1689 200 HOH HOH . H 5 HOH A 90 1690 204 HOH HOH . H 5 HOH A 91 1691 7 HOH HOH . H 5 HOH A 92 1692 96 HOH HOH . H 5 HOH A 93 1693 47 HOH HOH . H 5 HOH A 94 1694 189 HOH HOH . H 5 HOH A 95 1695 90 HOH HOH . H 5 HOH A 96 1696 44 HOH HOH . H 5 HOH A 97 1697 126 HOH HOH . H 5 HOH A 98 1698 125 HOH HOH . H 5 HOH A 99 1699 61 HOH HOH . H 5 HOH A 100 1700 92 HOH HOH . H 5 HOH A 101 1701 210 HOH HOH . H 5 HOH A 102 1702 142 HOH HOH . H 5 HOH A 103 1703 250 HOH HOH . H 5 HOH A 104 1704 154 HOH HOH . H 5 HOH A 105 1705 91 HOH HOH . H 5 HOH A 106 1706 19 HOH HOH . H 5 HOH A 107 1707 59 HOH HOH . H 5 HOH A 108 1708 53 HOH HOH . H 5 HOH A 109 1709 216 HOH HOH . H 5 HOH A 110 1710 275 HOH HOH . H 5 HOH A 111 1711 184 HOH HOH . H 5 HOH A 112 1712 263 HOH HOH . H 5 HOH A 113 1713 134 HOH HOH . H 5 HOH A 114 1714 203 HOH HOH . H 5 HOH A 115 1715 169 HOH HOH . H 5 HOH A 116 1716 168 HOH HOH . H 5 HOH A 117 1717 21 HOH HOH . H 5 HOH A 118 1718 51 HOH HOH . H 5 HOH A 119 1719 223 HOH HOH . H 5 HOH A 120 1720 130 HOH HOH . H 5 HOH A 121 1721 117 HOH HOH . H 5 HOH A 122 1722 181 HOH HOH . H 5 HOH A 123 1723 264 HOH HOH . H 5 HOH A 124 1724 140 HOH HOH . H 5 HOH A 125 1725 144 HOH HOH . I 5 HOH E 1 501 162 HOH HOH . I 5 HOH E 2 502 270 HOH HOH . I 5 HOH E 3 503 95 HOH HOH . I 5 HOH E 4 504 26 HOH HOH . I 5 HOH E 5 505 165 HOH HOH . I 5 HOH E 6 506 196 HOH HOH . I 5 HOH E 7 507 65 HOH HOH . I 5 HOH E 8 508 123 HOH HOH . I 5 HOH E 9 509 128 HOH HOH . I 5 HOH E 10 510 261 HOH HOH . I 5 HOH E 11 511 102 HOH HOH . I 5 HOH E 12 512 78 HOH HOH . I 5 HOH E 13 513 178 HOH HOH . I 5 HOH E 14 514 192 HOH HOH . I 5 HOH E 15 515 114 HOH HOH . I 5 HOH E 16 516 9 HOH HOH . I 5 HOH E 17 517 101 HOH HOH . I 5 HOH E 18 518 199 HOH HOH . I 5 HOH E 19 519 66 HOH HOH . I 5 HOH E 20 520 135 HOH HOH . I 5 HOH E 21 521 72 HOH HOH . I 5 HOH E 22 522 98 HOH HOH . I 5 HOH E 23 523 254 HOH HOH . I 5 HOH E 24 524 218 HOH HOH . I 5 HOH E 25 525 118 HOH HOH . I 5 HOH E 26 526 13 HOH HOH . I 5 HOH E 27 527 67 HOH HOH . I 5 HOH E 28 528 124 HOH HOH . I 5 HOH E 29 529 100 HOH HOH . I 5 HOH E 30 530 76 HOH HOH . I 5 HOH E 31 531 69 HOH HOH . I 5 HOH E 32 532 149 HOH HOH . I 5 HOH E 33 533 97 HOH HOH . I 5 HOH E 34 534 205 HOH HOH . I 5 HOH E 35 535 193 HOH HOH . I 5 HOH E 36 536 80 HOH HOH . I 5 HOH E 37 537 269 HOH HOH . I 5 HOH E 38 538 74 HOH HOH . I 5 HOH E 39 539 244 HOH HOH . I 5 HOH E 40 540 73 HOH HOH . I 5 HOH E 41 541 105 HOH HOH . I 5 HOH E 42 542 71 HOH HOH . I 5 HOH E 43 543 104 HOH HOH . I 5 HOH E 44 544 177 HOH HOH . I 5 HOH E 45 545 106 HOH HOH . I 5 HOH E 46 546 137 HOH HOH . I 5 HOH E 47 547 233 HOH HOH . I 5 HOH E 48 548 272 HOH HOH . I 5 HOH E 49 549 217 HOH HOH . I 5 HOH E 50 550 99 HOH HOH . I 5 HOH E 51 551 16 HOH HOH . I 5 HOH E 52 552 260 HOH HOH . I 5 HOH E 53 553 230 HOH HOH . I 5 HOH E 54 554 262 HOH HOH . I 5 HOH E 55 555 213 HOH HOH . I 5 HOH E 56 556 209 HOH HOH . I 5 HOH E 57 557 212 HOH HOH . I 5 HOH E 58 558 175 HOH HOH . I 5 HOH E 59 559 239 HOH HOH . I 5 HOH E 60 560 236 HOH HOH . I 5 HOH E 61 561 252 HOH HOH . I 5 HOH E 62 562 171 HOH HOH . I 5 HOH E 63 563 160 HOH HOH . I 5 HOH E 64 564 271 HOH HOH . I 5 HOH E 65 565 183 HOH HOH . I 5 HOH E 66 566 190 HOH HOH . I 5 HOH E 67 567 258 HOH HOH . I 5 HOH E 68 568 232 HOH HOH . I 5 HOH E 69 569 187 HOH HOH . I 5 HOH E 70 570 202 HOH HOH . J 5 HOH F 1 501 24 HOH HOH . J 5 HOH F 2 502 115 HOH HOH . J 5 HOH F 3 503 110 HOH HOH . J 5 HOH F 4 504 116 HOH HOH . J 5 HOH F 5 505 167 HOH HOH . J 5 HOH F 6 506 147 HOH HOH . J 5 HOH F 7 507 237 HOH HOH . J 5 HOH F 8 508 70 HOH HOH . J 5 HOH F 9 509 186 HOH HOH . J 5 HOH F 10 510 143 HOH HOH . J 5 HOH F 11 511 58 HOH HOH . J 5 HOH F 12 512 214 HOH HOH . J 5 HOH F 13 513 6 HOH HOH . J 5 HOH F 14 514 108 HOH HOH . J 5 HOH F 15 515 229 HOH HOH . J 5 HOH F 16 516 107 HOH HOH . J 5 HOH F 17 517 195 HOH HOH . J 5 HOH F 18 518 88 HOH HOH . J 5 HOH F 19 519 77 HOH HOH . J 5 HOH F 20 520 17 HOH HOH . J 5 HOH F 21 521 158 HOH HOH . J 5 HOH F 22 522 27 HOH HOH . J 5 HOH F 23 523 79 HOH HOH . J 5 HOH F 24 524 112 HOH HOH . J 5 HOH F 25 525 4 HOH HOH . J 5 HOH F 26 526 81 HOH HOH . J 5 HOH F 27 527 12 HOH HOH . J 5 HOH F 28 528 226 HOH HOH . J 5 HOH F 29 529 191 HOH HOH . J 5 HOH F 30 530 75 HOH HOH . J 5 HOH F 31 531 157 HOH HOH . J 5 HOH F 32 532 246 HOH HOH . J 5 HOH F 33 533 138 HOH HOH . J 5 HOH F 34 534 25 HOH HOH . J 5 HOH F 35 535 206 HOH HOH . J 5 HOH F 36 536 23 HOH HOH . J 5 HOH F 37 537 87 HOH HOH . J 5 HOH F 38 538 179 HOH HOH . J 5 HOH F 39 539 174 HOH HOH . J 5 HOH F 40 540 8 HOH HOH . J 5 HOH F 41 541 133 HOH HOH . J 5 HOH F 42 542 166 HOH HOH . J 5 HOH F 43 543 82 HOH HOH . J 5 HOH F 44 544 267 HOH HOH . J 5 HOH F 45 545 131 HOH HOH . J 5 HOH F 46 546 172 HOH HOH . J 5 HOH F 47 547 132 HOH HOH . J 5 HOH F 48 548 164 HOH HOH . J 5 HOH F 49 549 153 HOH HOH . J 5 HOH F 50 550 111 HOH HOH . J 5 HOH F 51 551 109 HOH HOH . J 5 HOH F 52 552 248 HOH HOH . J 5 HOH F 53 553 257 HOH HOH . J 5 HOH F 54 554 201 HOH HOH . J 5 HOH F 55 555 251 HOH HOH . J 5 HOH F 56 556 273 HOH HOH . J 5 HOH F 57 557 225 HOH HOH . J 5 HOH F 58 558 139 HOH HOH . J 5 HOH F 59 559 249 HOH HOH . J 5 HOH F 60 560 136 HOH HOH . J 5 HOH F 61 561 274 HOH HOH . J 5 HOH F 62 562 215 HOH HOH . J 5 HOH F 63 563 43 HOH HOH . J 5 HOH F 64 564 127 HOH HOH . J 5 HOH F 65 565 197 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 3 36.495 10.473 126.016 1 55.28 ? C1 PEG 1501 A 1 HETATM 2 O O1 PEG . . . D 3 35.537 10.778 125.029 1 52.33 ? O1 PEG 1501 A 1 HETATM 3 C C2 PEG . . . D 3 36.18 9.197 126.74 1 58.34 ? C2 PEG 1501 A 1 HETATM 4 O O2 PEG . . . D 3 36.329 8.088 125.86 1 60.06 ? O2 PEG 1501 A 1 HETATM 5 C C3 PEG . . . D 3 35.919 6.854 126.437 1 53.57 ? C3 PEG 1501 A 1 HETATM 6 C C4 PEG . . . D 3 36.357 5.711 125.566 1 54.51 ? C4 PEG 1501 A 1 HETATM 7 O O4 PEG . . . D 3 37.758 5.479 125.626 1 56.96 ? O4 PEG 1501 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 7 #