data_8WHI
#
_model_server_result.job_id            2Jwz72Kp0pi3a7GKhpfp0w 
_model_server_result.datetime_utc      '2024-10-18 01:20:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8whi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1503}' 
#
_entry.id    8WHI 
#
_exptl.entry_id    8WHI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8WHI 
_cell.length_a            52.624 
_cell.length_b            85.545 
_cell.length_c            114.195 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WHI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8WHI 
_atom_sites.fract_transf_matrix[1][1]    0.019003 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01169 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008757 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 PEG A 1 1501 1 PEG PEG . 
E 4 EDO A 1 1502 1 EDO EDO . 
F 4 EDO A 1 1503 2 EDO EDO . 
G 4 EDO A 1 1504 3 EDO EDO . 
H 5 HOH A 1 1601 228 HOH HOH . 
H 5 HOH A 2 1602 122 HOH HOH . 
H 5 HOH A 3 1603 129 HOH HOH . 
H 5 HOH A 4 1604 50 HOH HOH . 
H 5 HOH A 5 1605 57 HOH HOH . 
H 5 HOH A 6 1606 163 HOH HOH . 
H 5 HOH A 7 1607 32 HOH HOH . 
H 5 HOH A 8 1608 41 HOH HOH . 
H 5 HOH A 9 1609 45 HOH HOH . 
H 5 HOH A 10 1610 161 HOH HOH . 
H 5 HOH A 11 1611 103 HOH HOH . 
H 5 HOH A 12 1612 255 HOH HOH . 
H 5 HOH A 13 1613 120 HOH HOH . 
H 5 HOH A 14 1614 220 HOH HOH . 
H 5 HOH A 15 1615 194 HOH HOH . 
H 5 HOH A 16 1616 5 HOH HOH . 
H 5 HOH A 17 1617 208 HOH HOH . 
H 5 HOH A 18 1618 141 HOH HOH . 
H 5 HOH A 19 1619 56 HOH HOH . 
H 5 HOH A 20 1620 60 HOH HOH . 
H 5 HOH A 21 1621 188 HOH HOH . 
H 5 HOH A 22 1622 2 HOH HOH . 
H 5 HOH A 23 1623 176 HOH HOH . 
H 5 HOH A 24 1624 231 HOH HOH . 
H 5 HOH A 25 1625 36 HOH HOH . 
H 5 HOH A 26 1626 38 HOH HOH . 
H 5 HOH A 27 1627 37 HOH HOH . 
H 5 HOH A 28 1628 14 HOH HOH . 
H 5 HOH A 29 1629 10 HOH HOH . 
H 5 HOH A 30 1630 159 HOH HOH . 
H 5 HOH A 31 1631 222 HOH HOH . 
H 5 HOH A 32 1632 256 HOH HOH . 
H 5 HOH A 33 1633 173 HOH HOH . 
H 5 HOH A 34 1634 34 HOH HOH . 
H 5 HOH A 35 1635 11 HOH HOH . 
H 5 HOH A 36 1636 85 HOH HOH . 
H 5 HOH A 37 1637 63 HOH HOH . 
H 5 HOH A 38 1638 86 HOH HOH . 
H 5 HOH A 39 1639 145 HOH HOH . 
H 5 HOH A 40 1640 48 HOH HOH . 
H 5 HOH A 41 1641 180 HOH HOH . 
H 5 HOH A 42 1642 207 HOH HOH . 
H 5 HOH A 43 1643 241 HOH HOH . 
H 5 HOH A 44 1644 240 HOH HOH . 
H 5 HOH A 45 1645 62 HOH HOH . 
H 5 HOH A 46 1646 94 HOH HOH . 
H 5 HOH A 47 1647 22 HOH HOH . 
H 5 HOH A 48 1648 211 HOH HOH . 
H 5 HOH A 49 1649 89 HOH HOH . 
H 5 HOH A 50 1650 83 HOH HOH . 
H 5 HOH A 51 1651 3 HOH HOH . 
H 5 HOH A 52 1652 113 HOH HOH . 
H 5 HOH A 53 1653 224 HOH HOH . 
H 5 HOH A 54 1654 29 HOH HOH . 
H 5 HOH A 55 1655 155 HOH HOH . 
H 5 HOH A 56 1656 1 HOH HOH . 
H 5 HOH A 57 1657 198 HOH HOH . 
H 5 HOH A 58 1658 42 HOH HOH . 
H 5 HOH A 59 1659 243 HOH HOH . 
H 5 HOH A 60 1660 84 HOH HOH . 
H 5 HOH A 61 1661 46 HOH HOH . 
H 5 HOH A 62 1662 33 HOH HOH . 
H 5 HOH A 63 1663 40 HOH HOH . 
H 5 HOH A 64 1664 28 HOH HOH . 
H 5 HOH A 65 1665 30 HOH HOH . 
H 5 HOH A 66 1666 20 HOH HOH . 
H 5 HOH A 67 1667 15 HOH HOH . 
H 5 HOH A 68 1668 64 HOH HOH . 
H 5 HOH A 69 1669 35 HOH HOH . 
H 5 HOH A 70 1670 68 HOH HOH . 
H 5 HOH A 71 1671 185 HOH HOH . 
H 5 HOH A 72 1672 146 HOH HOH . 
H 5 HOH A 73 1673 31 HOH HOH . 
H 5 HOH A 74 1674 18 HOH HOH . 
H 5 HOH A 75 1675 151 HOH HOH . 
H 5 HOH A 76 1676 227 HOH HOH . 
H 5 HOH A 77 1677 93 HOH HOH . 
H 5 HOH A 78 1678 170 HOH HOH . 
H 5 HOH A 79 1679 49 HOH HOH . 
H 5 HOH A 80 1680 54 HOH HOH . 
H 5 HOH A 81 1681 52 HOH HOH . 
H 5 HOH A 82 1682 39 HOH HOH . 
H 5 HOH A 83 1683 152 HOH HOH . 
H 5 HOH A 84 1684 55 HOH HOH . 
H 5 HOH A 85 1685 234 HOH HOH . 
H 5 HOH A 86 1686 148 HOH HOH . 
H 5 HOH A 87 1687 121 HOH HOH . 
H 5 HOH A 88 1688 119 HOH HOH . 
H 5 HOH A 89 1689 200 HOH HOH . 
H 5 HOH A 90 1690 204 HOH HOH . 
H 5 HOH A 91 1691 7 HOH HOH . 
H 5 HOH A 92 1692 96 HOH HOH . 
H 5 HOH A 93 1693 47 HOH HOH . 
H 5 HOH A 94 1694 189 HOH HOH . 
H 5 HOH A 95 1695 90 HOH HOH . 
H 5 HOH A 96 1696 44 HOH HOH . 
H 5 HOH A 97 1697 126 HOH HOH . 
H 5 HOH A 98 1698 125 HOH HOH . 
H 5 HOH A 99 1699 61 HOH HOH . 
H 5 HOH A 100 1700 92 HOH HOH . 
H 5 HOH A 101 1701 210 HOH HOH . 
H 5 HOH A 102 1702 142 HOH HOH . 
H 5 HOH A 103 1703 250 HOH HOH . 
H 5 HOH A 104 1704 154 HOH HOH . 
H 5 HOH A 105 1705 91 HOH HOH . 
H 5 HOH A 106 1706 19 HOH HOH . 
H 5 HOH A 107 1707 59 HOH HOH . 
H 5 HOH A 108 1708 53 HOH HOH . 
H 5 HOH A 109 1709 216 HOH HOH . 
H 5 HOH A 110 1710 275 HOH HOH . 
H 5 HOH A 111 1711 184 HOH HOH . 
H 5 HOH A 112 1712 263 HOH HOH . 
H 5 HOH A 113 1713 134 HOH HOH . 
H 5 HOH A 114 1714 203 HOH HOH . 
H 5 HOH A 115 1715 169 HOH HOH . 
H 5 HOH A 116 1716 168 HOH HOH . 
H 5 HOH A 117 1717 21 HOH HOH . 
H 5 HOH A 118 1718 51 HOH HOH . 
H 5 HOH A 119 1719 223 HOH HOH . 
H 5 HOH A 120 1720 130 HOH HOH . 
H 5 HOH A 121 1721 117 HOH HOH . 
H 5 HOH A 122 1722 181 HOH HOH . 
H 5 HOH A 123 1723 264 HOH HOH . 
H 5 HOH A 124 1724 140 HOH HOH . 
H 5 HOH A 125 1725 144 HOH HOH . 
I 5 HOH E 1 501 162 HOH HOH . 
I 5 HOH E 2 502 270 HOH HOH . 
I 5 HOH E 3 503 95 HOH HOH . 
I 5 HOH E 4 504 26 HOH HOH . 
I 5 HOH E 5 505 165 HOH HOH . 
I 5 HOH E 6 506 196 HOH HOH . 
I 5 HOH E 7 507 65 HOH HOH . 
I 5 HOH E 8 508 123 HOH HOH . 
I 5 HOH E 9 509 128 HOH HOH . 
I 5 HOH E 10 510 261 HOH HOH . 
I 5 HOH E 11 511 102 HOH HOH . 
I 5 HOH E 12 512 78 HOH HOH . 
I 5 HOH E 13 513 178 HOH HOH . 
I 5 HOH E 14 514 192 HOH HOH . 
I 5 HOH E 15 515 114 HOH HOH . 
I 5 HOH E 16 516 9 HOH HOH . 
I 5 HOH E 17 517 101 HOH HOH . 
I 5 HOH E 18 518 199 HOH HOH . 
I 5 HOH E 19 519 66 HOH HOH . 
I 5 HOH E 20 520 135 HOH HOH . 
I 5 HOH E 21 521 72 HOH HOH . 
I 5 HOH E 22 522 98 HOH HOH . 
I 5 HOH E 23 523 254 HOH HOH . 
I 5 HOH E 24 524 218 HOH HOH . 
I 5 HOH E 25 525 118 HOH HOH . 
I 5 HOH E 26 526 13 HOH HOH . 
I 5 HOH E 27 527 67 HOH HOH . 
I 5 HOH E 28 528 124 HOH HOH . 
I 5 HOH E 29 529 100 HOH HOH . 
I 5 HOH E 30 530 76 HOH HOH . 
I 5 HOH E 31 531 69 HOH HOH . 
I 5 HOH E 32 532 149 HOH HOH . 
I 5 HOH E 33 533 97 HOH HOH . 
I 5 HOH E 34 534 205 HOH HOH . 
I 5 HOH E 35 535 193 HOH HOH . 
I 5 HOH E 36 536 80 HOH HOH . 
I 5 HOH E 37 537 269 HOH HOH . 
I 5 HOH E 38 538 74 HOH HOH . 
I 5 HOH E 39 539 244 HOH HOH . 
I 5 HOH E 40 540 73 HOH HOH . 
I 5 HOH E 41 541 105 HOH HOH . 
I 5 HOH E 42 542 71 HOH HOH . 
I 5 HOH E 43 543 104 HOH HOH . 
I 5 HOH E 44 544 177 HOH HOH . 
I 5 HOH E 45 545 106 HOH HOH . 
I 5 HOH E 46 546 137 HOH HOH . 
I 5 HOH E 47 547 233 HOH HOH . 
I 5 HOH E 48 548 272 HOH HOH . 
I 5 HOH E 49 549 217 HOH HOH . 
I 5 HOH E 50 550 99 HOH HOH . 
I 5 HOH E 51 551 16 HOH HOH . 
I 5 HOH E 52 552 260 HOH HOH . 
I 5 HOH E 53 553 230 HOH HOH . 
I 5 HOH E 54 554 262 HOH HOH . 
I 5 HOH E 55 555 213 HOH HOH . 
I 5 HOH E 56 556 209 HOH HOH . 
I 5 HOH E 57 557 212 HOH HOH . 
I 5 HOH E 58 558 175 HOH HOH . 
I 5 HOH E 59 559 239 HOH HOH . 
I 5 HOH E 60 560 236 HOH HOH . 
I 5 HOH E 61 561 252 HOH HOH . 
I 5 HOH E 62 562 171 HOH HOH . 
I 5 HOH E 63 563 160 HOH HOH . 
I 5 HOH E 64 564 271 HOH HOH . 
I 5 HOH E 65 565 183 HOH HOH . 
I 5 HOH E 66 566 190 HOH HOH . 
I 5 HOH E 67 567 258 HOH HOH . 
I 5 HOH E 68 568 232 HOH HOH . 
I 5 HOH E 69 569 187 HOH HOH . 
I 5 HOH E 70 570 202 HOH HOH . 
J 5 HOH F 1 501 24 HOH HOH . 
J 5 HOH F 2 502 115 HOH HOH . 
J 5 HOH F 3 503 110 HOH HOH . 
J 5 HOH F 4 504 116 HOH HOH . 
J 5 HOH F 5 505 167 HOH HOH . 
J 5 HOH F 6 506 147 HOH HOH . 
J 5 HOH F 7 507 237 HOH HOH . 
J 5 HOH F 8 508 70 HOH HOH . 
J 5 HOH F 9 509 186 HOH HOH . 
J 5 HOH F 10 510 143 HOH HOH . 
J 5 HOH F 11 511 58 HOH HOH . 
J 5 HOH F 12 512 214 HOH HOH . 
J 5 HOH F 13 513 6 HOH HOH . 
J 5 HOH F 14 514 108 HOH HOH . 
J 5 HOH F 15 515 229 HOH HOH . 
J 5 HOH F 16 516 107 HOH HOH . 
J 5 HOH F 17 517 195 HOH HOH . 
J 5 HOH F 18 518 88 HOH HOH . 
J 5 HOH F 19 519 77 HOH HOH . 
J 5 HOH F 20 520 17 HOH HOH . 
J 5 HOH F 21 521 158 HOH HOH . 
J 5 HOH F 22 522 27 HOH HOH . 
J 5 HOH F 23 523 79 HOH HOH . 
J 5 HOH F 24 524 112 HOH HOH . 
J 5 HOH F 25 525 4 HOH HOH . 
J 5 HOH F 26 526 81 HOH HOH . 
J 5 HOH F 27 527 12 HOH HOH . 
J 5 HOH F 28 528 226 HOH HOH . 
J 5 HOH F 29 529 191 HOH HOH . 
J 5 HOH F 30 530 75 HOH HOH . 
J 5 HOH F 31 531 157 HOH HOH . 
J 5 HOH F 32 532 246 HOH HOH . 
J 5 HOH F 33 533 138 HOH HOH . 
J 5 HOH F 34 534 25 HOH HOH . 
J 5 HOH F 35 535 206 HOH HOH . 
J 5 HOH F 36 536 23 HOH HOH . 
J 5 HOH F 37 537 87 HOH HOH . 
J 5 HOH F 38 538 179 HOH HOH . 
J 5 HOH F 39 539 174 HOH HOH . 
J 5 HOH F 40 540 8 HOH HOH . 
J 5 HOH F 41 541 133 HOH HOH . 
J 5 HOH F 42 542 166 HOH HOH . 
J 5 HOH F 43 543 82 HOH HOH . 
J 5 HOH F 44 544 267 HOH HOH . 
J 5 HOH F 45 545 131 HOH HOH . 
J 5 HOH F 46 546 172 HOH HOH . 
J 5 HOH F 47 547 132 HOH HOH . 
J 5 HOH F 48 548 164 HOH HOH . 
J 5 HOH F 49 549 153 HOH HOH . 
J 5 HOH F 50 550 111 HOH HOH . 
J 5 HOH F 51 551 109 HOH HOH . 
J 5 HOH F 52 552 248 HOH HOH . 
J 5 HOH F 53 553 257 HOH HOH . 
J 5 HOH F 54 554 201 HOH HOH . 
J 5 HOH F 55 555 251 HOH HOH . 
J 5 HOH F 56 556 273 HOH HOH . 
J 5 HOH F 57 557 225 HOH HOH . 
J 5 HOH F 58 558 139 HOH HOH . 
J 5 HOH F 59 559 249 HOH HOH . 
J 5 HOH F 60 560 136 HOH HOH . 
J 5 HOH F 61 561 274 HOH HOH . 
J 5 HOH F 62 562 215 HOH HOH . 
J 5 HOH F 63 563 43 HOH HOH . 
J 5 HOH F 64 564 127 HOH HOH . 
J 5 HOH F 65 565 197 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 4 30.003 -13.965 114.01 1 66.59 ? C1 EDO 1503 A 1 
HETATM 2 O O1 EDO . . . F 4 30.867 -13.056 113.356 1 67.22 ? O1 EDO 1503 A 1 
HETATM 3 C C2 EDO . . . F 4 28.7 -13.345 114.332 1 63.23 ? C2 EDO 1503 A 1 
HETATM 4 O O2 EDO . . . F 4 28.095 -12.78 113.181 1 59.25 ? O2 EDO 1503 A 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#