data_8WIP # _model_server_result.job_id bOJb2yMok_ISrY_brMZW7g _model_server_result.datetime_utc '2025-01-12 00:57:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8wip # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":302}' # _entry.id 8WIP # _exptl.entry_id 8WIP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8WIP _cell.length_a 65.784 _cell.length_b 89.358 _cell.length_c 98.985 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8WIP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 179 n y N1 C5 IMD sing 180 n y N1 HN1 IMD sing 181 n n C2 N3 IMD doub 182 n y C2 H2 IMD sing 183 n n N3 C4 IMD sing 184 n y N3 HN3 IMD sing 185 n n C4 C5 IMD doub 186 n y C4 H4 IMD sing 187 n n C5 H5 IMD sing 188 n n # _atom_sites.entry_id 8WIP _atom_sites.fract_transf_matrix[1][1] 0.015201 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011191 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010103 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT A 1 401 401 ACT ACT . D 2 ACT B 1 301 301 ACT ACT . E 3 IMD B 1 302 501 IMD IMD . F 4 HOH A 1 501 50 HOH HOH . F 4 HOH A 2 502 133 HOH HOH . F 4 HOH A 3 503 22 HOH HOH . F 4 HOH A 4 504 38 HOH HOH . F 4 HOH A 5 505 102 HOH HOH . F 4 HOH A 6 506 56 HOH HOH . F 4 HOH A 7 507 139 HOH HOH . F 4 HOH A 8 508 67 HOH HOH . F 4 HOH A 9 509 26 HOH HOH . F 4 HOH A 10 510 130 HOH HOH . F 4 HOH A 11 511 84 HOH HOH . F 4 HOH A 12 512 123 HOH HOH . F 4 HOH A 13 513 31 HOH HOH . F 4 HOH A 14 514 105 HOH HOH . F 4 HOH A 15 515 85 HOH HOH . F 4 HOH A 16 516 91 HOH HOH . F 4 HOH A 17 517 11 HOH HOH . F 4 HOH A 18 518 8 HOH HOH . F 4 HOH A 19 519 16 HOH HOH . F 4 HOH A 20 520 137 HOH HOH . F 4 HOH A 21 521 29 HOH HOH . F 4 HOH A 22 522 41 HOH HOH . F 4 HOH A 23 523 110 HOH HOH . F 4 HOH A 24 524 108 HOH HOH . F 4 HOH A 25 525 81 HOH HOH . F 4 HOH A 26 526 94 HOH HOH . F 4 HOH A 27 527 45 HOH HOH . F 4 HOH A 28 528 49 HOH HOH . F 4 HOH A 29 529 4 HOH HOH . F 4 HOH A 30 530 131 HOH HOH . F 4 HOH A 31 531 80 HOH HOH . F 4 HOH A 32 532 33 HOH HOH . F 4 HOH A 33 533 7 HOH HOH . F 4 HOH A 34 534 98 HOH HOH . F 4 HOH A 35 535 129 HOH HOH . F 4 HOH A 36 536 55 HOH HOH . F 4 HOH A 37 537 46 HOH HOH . F 4 HOH A 38 538 68 HOH HOH . F 4 HOH A 39 539 35 HOH HOH . F 4 HOH A 40 540 114 HOH HOH . F 4 HOH A 41 541 93 HOH HOH . F 4 HOH A 42 542 51 HOH HOH . F 4 HOH A 43 543 23 HOH HOH . F 4 HOH A 44 544 25 HOH HOH . F 4 HOH A 45 545 86 HOH HOH . F 4 HOH A 46 546 52 HOH HOH . F 4 HOH A 47 547 47 HOH HOH . F 4 HOH A 48 548 87 HOH HOH . F 4 HOH A 49 549 118 HOH HOH . F 4 HOH A 50 550 132 HOH HOH . F 4 HOH A 51 551 89 HOH HOH . F 4 HOH A 52 552 13 HOH HOH . F 4 HOH A 53 553 97 HOH HOH . F 4 HOH A 54 554 39 HOH HOH . F 4 HOH A 55 555 99 HOH HOH . F 4 HOH A 56 556 76 HOH HOH . F 4 HOH A 57 557 65 HOH HOH . F 4 HOH A 58 558 9 HOH HOH . F 4 HOH A 59 559 28 HOH HOH . F 4 HOH A 60 560 27 HOH HOH . F 4 HOH A 61 561 59 HOH HOH . F 4 HOH A 62 562 109 HOH HOH . F 4 HOH A 63 563 70 HOH HOH . F 4 HOH A 64 564 20 HOH HOH . F 4 HOH A 65 565 17 HOH HOH . F 4 HOH A 66 566 119 HOH HOH . F 4 HOH A 67 567 90 HOH HOH . F 4 HOH A 68 568 121 HOH HOH . F 4 HOH A 69 569 74 HOH HOH . F 4 HOH A 70 570 79 HOH HOH . F 4 HOH A 71 571 6 HOH HOH . F 4 HOH A 72 572 117 HOH HOH . F 4 HOH A 73 573 120 HOH HOH . F 4 HOH A 74 574 111 HOH HOH . F 4 HOH A 75 575 57 HOH HOH . G 4 HOH B 1 401 92 HOH HOH . G 4 HOH B 2 402 136 HOH HOH . G 4 HOH B 3 403 60 HOH HOH . G 4 HOH B 4 404 113 HOH HOH . G 4 HOH B 5 405 141 HOH HOH . G 4 HOH B 6 406 140 HOH HOH . G 4 HOH B 7 407 122 HOH HOH . G 4 HOH B 8 408 1 HOH HOH . G 4 HOH B 9 409 62 HOH HOH . G 4 HOH B 10 410 73 HOH HOH . G 4 HOH B 11 411 127 HOH HOH . G 4 HOH B 12 412 126 HOH HOH . G 4 HOH B 13 413 77 HOH HOH . G 4 HOH B 14 414 3 HOH HOH . G 4 HOH B 15 415 128 HOH HOH . G 4 HOH B 16 416 101 HOH HOH . G 4 HOH B 17 417 115 HOH HOH . G 4 HOH B 18 418 30 HOH HOH . G 4 HOH B 19 419 88 HOH HOH . G 4 HOH B 20 420 21 HOH HOH . G 4 HOH B 21 421 43 HOH HOH . G 4 HOH B 22 422 64 HOH HOH . G 4 HOH B 23 423 37 HOH HOH . G 4 HOH B 24 424 135 HOH HOH . G 4 HOH B 25 425 14 HOH HOH . G 4 HOH B 26 426 82 HOH HOH . G 4 HOH B 27 427 42 HOH HOH . G 4 HOH B 28 428 12 HOH HOH . G 4 HOH B 29 429 2 HOH HOH . G 4 HOH B 30 430 19 HOH HOH . G 4 HOH B 31 431 134 HOH HOH . G 4 HOH B 32 432 100 HOH HOH . G 4 HOH B 33 433 54 HOH HOH . G 4 HOH B 34 434 44 HOH HOH . G 4 HOH B 35 435 40 HOH HOH . G 4 HOH B 36 436 10 HOH HOH . G 4 HOH B 37 437 83 HOH HOH . G 4 HOH B 38 438 5 HOH HOH . G 4 HOH B 39 439 15 HOH HOH . G 4 HOH B 40 440 72 HOH HOH . G 4 HOH B 41 441 78 HOH HOH . G 4 HOH B 42 442 145 HOH HOH . G 4 HOH B 43 443 36 HOH HOH . G 4 HOH B 44 444 53 HOH HOH . G 4 HOH B 45 445 34 HOH HOH . G 4 HOH B 46 446 24 HOH HOH . G 4 HOH B 47 447 138 HOH HOH . G 4 HOH B 48 448 58 HOH HOH . G 4 HOH B 49 449 63 HOH HOH . G 4 HOH B 50 450 32 HOH HOH . G 4 HOH B 51 451 18 HOH HOH . G 4 HOH B 52 452 116 HOH HOH . G 4 HOH B 53 453 61 HOH HOH . G 4 HOH B 54 454 66 HOH HOH . G 4 HOH B 55 455 69 HOH HOH . G 4 HOH B 56 456 104 HOH HOH . G 4 HOH B 57 457 48 HOH HOH . G 4 HOH B 58 458 75 HOH HOH . G 4 HOH B 59 459 71 HOH HOH . G 4 HOH B 60 460 106 HOH HOH . G 4 HOH B 61 461 107 HOH HOH . G 4 HOH B 62 462 103 HOH HOH . G 4 HOH B 63 463 112 HOH HOH . G 4 HOH B 64 464 95 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . E 3 25.927 10.765 -18.47 1 30.66 ? N1 IMD 302 B 1 HETATM 2 C C2 IMD . . . E 3 26.548 10.725 -19.653 1 30.28 ? C2 IMD 302 B 1 HETATM 3 N N3 IMD . . . E 3 27.267 11.855 -19.763 1 30.06 ? N3 IMD 302 B 1 HETATM 4 C C4 IMD . . . E 3 27.085 12.623 -18.674 1 30.24 ? C4 IMD 302 B 1 HETATM 5 C C5 IMD . . . E 3 26.23 11.924 -17.85 1 30.71 ? C5 IMD 302 B 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #