data_8WL5 # _model_server_result.job_id w9EL3VgOOqHmZEMFm7JHBA _model_server_result.datetime_utc '2025-01-10 16:10:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8wl5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8WL5 # _exptl.entry_id 8WL5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8WL5 _cell.length_a 81.96 _cell.length_b 82.43 _cell.length_c 47.92 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8WL5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8WL5 _atom_sites.fract_transf_matrix[1][1] 0.012201 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012132 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020868 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 401 401 EDO EDO . C 3 HOH A 1 501 91 HOH HOH . C 3 HOH A 2 502 88 HOH HOH . C 3 HOH A 3 503 80 HOH HOH . C 3 HOH A 4 504 62 HOH HOH . C 3 HOH A 5 505 104 HOH HOH . C 3 HOH A 6 506 51 HOH HOH . C 3 HOH A 7 507 83 HOH HOH . C 3 HOH A 8 508 38 HOH HOH . C 3 HOH A 9 509 101 HOH HOH . C 3 HOH A 10 510 25 HOH HOH . C 3 HOH A 11 511 55 HOH HOH . C 3 HOH A 12 512 57 HOH HOH . C 3 HOH A 13 513 109 HOH HOH . C 3 HOH A 14 514 17 HOH HOH . C 3 HOH A 15 515 61 HOH HOH . C 3 HOH A 16 516 19 HOH HOH . C 3 HOH A 17 517 40 HOH HOH . C 3 HOH A 18 518 65 HOH HOH . C 3 HOH A 19 519 97 HOH HOH . C 3 HOH A 20 520 10 HOH HOH . C 3 HOH A 21 521 78 HOH HOH . C 3 HOH A 22 522 58 HOH HOH . C 3 HOH A 23 523 7 HOH HOH . C 3 HOH A 24 524 82 HOH HOH . C 3 HOH A 25 525 4 HOH HOH . C 3 HOH A 26 526 72 HOH HOH . C 3 HOH A 27 527 5 HOH HOH . C 3 HOH A 28 528 43 HOH HOH . C 3 HOH A 29 529 81 HOH HOH . C 3 HOH A 30 530 100 HOH HOH . C 3 HOH A 31 531 85 HOH HOH . C 3 HOH A 32 532 114 HOH HOH . C 3 HOH A 33 533 53 HOH HOH . C 3 HOH A 34 534 9 HOH HOH . C 3 HOH A 35 535 27 HOH HOH . C 3 HOH A 36 536 34 HOH HOH . C 3 HOH A 37 537 96 HOH HOH . C 3 HOH A 38 538 26 HOH HOH . C 3 HOH A 39 539 36 HOH HOH . C 3 HOH A 40 540 31 HOH HOH . C 3 HOH A 41 541 66 HOH HOH . C 3 HOH A 42 542 15 HOH HOH . C 3 HOH A 43 543 3 HOH HOH . C 3 HOH A 44 544 105 HOH HOH . C 3 HOH A 45 545 79 HOH HOH . C 3 HOH A 46 546 99 HOH HOH . C 3 HOH A 47 547 23 HOH HOH . C 3 HOH A 48 548 48 HOH HOH . C 3 HOH A 49 549 63 HOH HOH . C 3 HOH A 50 550 14 HOH HOH . C 3 HOH A 51 551 12 HOH HOH . C 3 HOH A 52 552 67 HOH HOH . C 3 HOH A 53 553 86 HOH HOH . C 3 HOH A 54 554 2 HOH HOH . C 3 HOH A 55 555 76 HOH HOH . C 3 HOH A 56 556 30 HOH HOH . C 3 HOH A 57 557 6 HOH HOH . C 3 HOH A 58 558 41 HOH HOH . C 3 HOH A 59 559 50 HOH HOH . C 3 HOH A 60 560 73 HOH HOH . C 3 HOH A 61 561 52 HOH HOH . C 3 HOH A 62 562 64 HOH HOH . C 3 HOH A 63 563 94 HOH HOH . C 3 HOH A 64 564 35 HOH HOH . C 3 HOH A 65 565 29 HOH HOH . C 3 HOH A 66 566 21 HOH HOH . C 3 HOH A 67 567 18 HOH HOH . C 3 HOH A 68 568 42 HOH HOH . C 3 HOH A 69 569 45 HOH HOH . C 3 HOH A 70 570 60 HOH HOH . C 3 HOH A 71 571 13 HOH HOH . C 3 HOH A 72 572 111 HOH HOH . C 3 HOH A 73 573 92 HOH HOH . C 3 HOH A 74 574 11 HOH HOH . C 3 HOH A 75 575 59 HOH HOH . C 3 HOH A 76 576 108 HOH HOH . C 3 HOH A 77 577 32 HOH HOH . C 3 HOH A 78 578 77 HOH HOH . C 3 HOH A 79 579 112 HOH HOH . C 3 HOH A 80 580 74 HOH HOH . C 3 HOH A 81 581 33 HOH HOH . C 3 HOH A 82 582 113 HOH HOH . C 3 HOH A 83 583 1 HOH HOH . C 3 HOH A 84 584 110 HOH HOH . C 3 HOH A 85 585 54 HOH HOH . C 3 HOH A 86 586 39 HOH HOH . C 3 HOH A 87 587 28 HOH HOH . C 3 HOH A 88 588 37 HOH HOH . C 3 HOH A 89 589 84 HOH HOH . C 3 HOH A 90 590 44 HOH HOH . C 3 HOH A 91 591 75 HOH HOH . C 3 HOH A 92 592 68 HOH HOH . C 3 HOH A 93 593 103 HOH HOH . C 3 HOH A 94 594 49 HOH HOH . C 3 HOH A 95 595 22 HOH HOH . C 3 HOH A 96 596 47 HOH HOH . C 3 HOH A 97 597 24 HOH HOH . C 3 HOH A 98 598 89 HOH HOH . C 3 HOH A 99 599 20 HOH HOH . C 3 HOH A 100 600 16 HOH HOH . C 3 HOH A 101 601 46 HOH HOH . C 3 HOH A 102 602 8 HOH HOH . C 3 HOH A 103 603 107 HOH HOH . C 3 HOH A 104 604 71 HOH HOH . C 3 HOH A 105 605 93 HOH HOH . C 3 HOH A 106 606 87 HOH HOH . C 3 HOH A 107 607 106 HOH HOH . C 3 HOH A 108 608 95 HOH HOH . C 3 HOH A 109 609 90 HOH HOH . C 3 HOH A 110 610 56 HOH HOH . C 3 HOH A 111 611 102 HOH HOH . C 3 HOH A 112 612 98 HOH HOH . C 3 HOH A 113 613 115 HOH HOH . C 3 HOH A 114 614 116 HOH HOH . C 3 HOH A 115 615 70 HOH HOH . C 3 HOH A 116 616 69 HOH HOH . C 3 HOH A 117 617 117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 -6.647 12.953 26.278 1 25.27 ? C1 EDO 401 A 1 HETATM 2 O O1 EDO . . . B 2 -7.103 11.982 25.327 1 25.71 ? O1 EDO 401 A 1 HETATM 3 C C2 EDO . . . B 2 -6.749 14.361 25.792 1 22.36 ? C2 EDO 401 A 1 HETATM 4 O O2 EDO . . . B 2 -8.076 14.759 25.473 1 23.77 ? O2 EDO 401 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 4 #