data_8WM5 # _model_server_result.job_id MgccGOxFC0-VOoUFD8MfMg _model_server_result.datetime_utc '2024-10-10 07:27:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8wm5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 8WM5 # _exptl.entry_id 8WM5 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 734.039 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHATIDYLETHANOLAMINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8WM5 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8WM5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C40 H80 N O8 P' _chem_comp.formula_weight 734.039 _chem_comp.id PTY _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHATIDYLETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O4 PTY sing 530 n n C1 C6 PTY sing 531 n n C1 HC11 PTY sing 532 n n C1 HC12 PTY sing 533 n n C2 C3 PTY sing 534 n n C2 N1 PTY sing 535 n n C2 HC21 PTY sing 536 n n C2 HC22 PTY sing 537 n n C3 O11 PTY sing 538 n n C3 HC31 PTY sing 539 n n C3 HC32 PTY sing 540 n n O4 C30 PTY sing 541 n n C5 C6 PTY sing 542 n n C5 O14 PTY sing 543 n n C5 HC51 PTY sing 544 n n C5 HC52 PTY sing 545 n n C6 O7 PTY sing 546 n n C6 HC6 PTY sing 547 n n O7 C8 PTY sing 548 n n C8 O10 PTY doub 549 n n C8 C11 PTY sing 550 n n C11 C12 PTY sing 551 n n C11 H111 PTY sing 552 n n C11 H112 PTY sing 553 n n C12 C13 PTY sing 554 n n C12 H121 PTY sing 555 n n C12 H122 PTY sing 556 n n C13 C14 PTY sing 557 n n C13 H131 PTY sing 558 n n C13 H132 PTY sing 559 n n C14 C15 PTY sing 560 n n C14 H141 PTY sing 561 n n C14 H142 PTY sing 562 n n C15 C16 PTY sing 563 n n C15 H151 PTY sing 564 n n C15 H152 PTY sing 565 n n C16 C17 PTY sing 566 n n C16 H161 PTY sing 567 n n C16 H162 PTY sing 568 n n C17 C18 PTY sing 569 n n C17 H171 PTY sing 570 n n C17 H172 PTY sing 571 n n C18 C19 PTY sing 572 n n C18 H181 PTY sing 573 n n C18 H182 PTY sing 574 n n C19 C20 PTY sing 575 n n C19 H191 PTY sing 576 n n C19 H192 PTY sing 577 n n C20 C21 PTY sing 578 n n C20 H201 PTY sing 579 n n C20 H202 PTY sing 580 n n C21 C22 PTY sing 581 n n C21 H211 PTY sing 582 n n C21 H212 PTY sing 583 n n C22 C23 PTY sing 584 n n C22 H221 PTY sing 585 n n C22 H222 PTY sing 586 n n C23 C24 PTY sing 587 n n C23 H231 PTY sing 588 n n C23 H232 PTY sing 589 n n C24 C25 PTY sing 590 n n C24 H241 PTY sing 591 n n C24 H242 PTY sing 592 n n C25 C26 PTY sing 593 n n C25 H251 PTY sing 594 n n C25 H252 PTY sing 595 n n C26 C27 PTY sing 596 n n C26 H261 PTY sing 597 n n C26 H262 PTY sing 598 n n C27 C28 PTY sing 599 n n C27 H271 PTY sing 600 n n C27 H272 PTY sing 601 n n C28 C29 PTY sing 602 n n C28 H281 PTY sing 603 n n C28 H282 PTY sing 604 n n C29 H291 PTY sing 605 n n C29 H292 PTY sing 606 n n C29 H293 PTY sing 607 n n C30 C31 PTY sing 608 n n C30 O30 PTY doub 609 n n C31 C32 PTY sing 610 n n C31 H311 PTY sing 611 n n C31 H312 PTY sing 612 n n C32 C33 PTY sing 613 n n C32 H321 PTY sing 614 n n C32 H322 PTY sing 615 n n C33 C34 PTY sing 616 n n C33 H331 PTY sing 617 n n C33 H332 PTY sing 618 n n C34 C35 PTY sing 619 n n C34 H341 PTY sing 620 n n C34 H342 PTY sing 621 n n C35 C36 PTY sing 622 n n C35 H351 PTY sing 623 n n C35 H352 PTY sing 624 n n C36 C37 PTY sing 625 n n C36 H361 PTY sing 626 n n C36 H362 PTY sing 627 n n C37 C38 PTY sing 628 n n C37 H371 PTY sing 629 n n C37 H372 PTY sing 630 n n C38 C39 PTY sing 631 n n C38 H381 PTY sing 632 n n C38 H382 PTY sing 633 n n C39 C40 PTY sing 634 n n C39 H391 PTY sing 635 n n C39 H392 PTY sing 636 n n C40 C41 PTY sing 637 n n C40 H401 PTY sing 638 n n C40 H402 PTY sing 639 n n C41 C42 PTY sing 640 n n C41 H411 PTY sing 641 n n C41 H412 PTY sing 642 n n C42 C43 PTY sing 643 n n C42 H421 PTY sing 644 n n C42 H422 PTY sing 645 n n C43 C44 PTY sing 646 n n C43 H431 PTY sing 647 n n C43 H432 PTY sing 648 n n C44 H441 PTY sing 649 n n C44 H442 PTY sing 650 n n C44 H443 PTY sing 651 n n P1 O11 PTY sing 652 n n P1 O12 PTY sing 653 n n P1 O13 PTY doub 654 n n P1 O14 PTY sing 655 n n O12 H12O PTY sing 656 n n N1 HN11 PTY sing 657 n n N1 HN12 PTY sing 658 n n # _atom_sites.entry_id 8WM5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PTY A 1 601 601 PTY PTY . D 2 PTY A 1 602 701 PTY PTY . E 2 PTY B 1 601 601 PTY PTY . F 2 PTY B 1 602 701 PTY PTY . G 3 CDL B 1 603 601 CDL CDL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PTY . . . C 2 165.609 148.79 131.826 1 42.79 ? C1 PTY 601 A 1 HETATM 2 C C2 PTY . . . C 2 162.537 154.327 133.986 1 42.79 ? C2 PTY 601 A 1 HETATM 3 C C3 PTY . . . C 2 162.091 153.171 134.84 1 42.79 ? C3 PTY 601 A 1 HETATM 4 O O4 PTY . . . C 2 165.025 147.906 130.846 1 42.79 ? O4 PTY 601 A 1 HETATM 5 C C5 PTY . . . C 2 164.062 149.484 133.693 1 42.79 ? C5 PTY 601 A 1 HETATM 6 C C6 PTY . . . C 2 164.55 149.762 132.291 1 42.79 ? C6 PTY 601 A 1 HETATM 7 O O7 PTY . . . C 2 163.427 149.734 131.369 1 42.79 ? O7 PTY 601 A 1 HETATM 8 C C8 PTY . . . C 2 163.196 150.825 130.621 1 42.79 ? C8 PTY 601 A 1 HETATM 9 O O10 PTY . . . C 2 163.243 151.941 131.062 1 42.79 ? O10 PTY 601 A 1 HETATM 10 C C11 PTY . . . C 2 162.867 150.495 129.197 1 42.79 ? C11 PTY 601 A 1 HETATM 11 C C12 PTY . . . C 2 161.703 149.572 129.065 1 42.79 ? C12 PTY 601 A 1 HETATM 12 C C13 PTY . . . C 2 161.442 149.184 127.625 1 42.79 ? C13 PTY 601 A 1 HETATM 13 C C14 PTY . . . C 2 162.687 148.953 126.817 1 42.79 ? C14 PTY 601 A 1 HETATM 14 C C15 PTY . . . C 2 162.502 147.997 125.669 1 42.79 ? C15 PTY 601 A 1 HETATM 15 C C16 PTY . . . C 2 161.066 147.8 125.258 1 42.79 ? C16 PTY 601 A 1 HETATM 16 C C17 PTY . . . C 2 160.866 146.732 124.214 1 42.79 ? C17 PTY 601 A 1 HETATM 17 C C18 PTY . . . C 2 159.975 145.597 124.651 1 42.79 ? C18 PTY 601 A 1 HETATM 18 C C19 PTY . . . C 2 160.214 144.304 123.915 1 42.79 ? C19 PTY 601 A 1 HETATM 19 C C30 PTY . . . C 2 165.311 146.62 130.989 1 42.79 ? C30 PTY 601 A 1 HETATM 20 C C31 PTY . . . C 2 165.844 146.026 129.72 1 42.79 ? C31 PTY 601 A 1 HETATM 21 O O30 PTY . . . C 2 165.159 146.028 132.02 1 42.79 ? O30 PTY 601 A 1 HETATM 22 C C32 PTY . . . C 2 164.938 146.225 128.552 1 42.79 ? C32 PTY 601 A 1 HETATM 23 C C33 PTY . . . C 2 165.53 145.687 127.265 1 42.79 ? C33 PTY 601 A 1 HETATM 24 C C34 PTY . . . C 2 165.074 144.296 126.917 1 42.79 ? C34 PTY 601 A 1 HETATM 25 C C35 PTY . . . C 2 164.193 144.227 125.698 1 42.79 ? C35 PTY 601 A 1 HETATM 26 C C36 PTY . . . C 2 164.946 144.217 124.394 1 42.79 ? C36 PTY 601 A 1 HETATM 27 C C37 PTY . . . C 2 164.076 144.009 123.182 1 42.79 ? C37 PTY 601 A 1 HETATM 28 C C38 PTY . . . C 2 164.74 144.363 121.876 1 42.79 ? C38 PTY 601 A 1 HETATM 29 C C39 PTY . . . C 2 163.785 144.505 120.716 1 42.79 ? C39 PTY 601 A 1 HETATM 30 C C40 PTY . . . C 2 163.367 145.925 120.427 1 42.79 ? C40 PTY 601 A 1 HETATM 31 C C41 PTY . . . C 2 161.887 146.099 120.197 1 42.79 ? C41 PTY 601 A 1 HETATM 32 C C42 PTY . . . C 2 161.469 147.514 119.887 1 42.79 ? C42 PTY 601 A 1 HETATM 33 C C43 PTY . . . C 2 162.325 148.578 120.521 1 42.79 ? C43 PTY 601 A 1 HETATM 34 C C44 PTY . . . C 2 161.563 149.828 120.891 1 42.79 ? C44 PTY 601 A 1 HETATM 35 P P1 PTY . . . C 2 163.459 151.083 135.697 1 42.79 ? P1 PTY 601 A 1 HETATM 36 O O11 PTY . . . C 2 163.206 152.667 135.622 1 42.79 ? O11 PTY 601 A 1 HETATM 37 O O12 PTY . . . C 2 162.352 150.457 136.498 1 42.79 ? O12 PTY 601 A 1 HETATM 38 O O13 PTY . . . C 2 164.893 150.853 136.089 1 42.79 ? O13 PTY 601 A 1 HETATM 39 O O14 PTY . . . C 2 163.294 150.62 134.17 1 42.79 ? O14 PTY 601 A 1 HETATM 40 N N1 PTY . . . C 2 162.023 154.227 132.619 1 42.79 ? N1 PTY 601 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #