data_8WM5
#
_model_server_result.job_id            h1dy2wNGe4qaqt3D0ZG1vQ 
_model_server_result.datetime_utc      '2024-10-10 07:27:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wm5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":602}' 
#
_entry.id    8WM5 
#
_exptl.entry_id    8WM5 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              734.039 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHOSPHATIDYLETHANOLAMINE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8WM5 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WM5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
_chem_comp.formula           'C40 H80 N O8 P' 
_chem_comp.formula_weight    734.039 
_chem_comp.id                PTY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              PHOSPHATIDYLETHANOLAMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O4 PTY sing 530 n n 
C1 C6 PTY sing 531 n n 
C1 HC11 PTY sing 532 n n 
C1 HC12 PTY sing 533 n n 
C2 C3 PTY sing 534 n n 
C2 N1 PTY sing 535 n n 
C2 HC21 PTY sing 536 n n 
C2 HC22 PTY sing 537 n n 
C3 O11 PTY sing 538 n n 
C3 HC31 PTY sing 539 n n 
C3 HC32 PTY sing 540 n n 
O4 C30 PTY sing 541 n n 
C5 C6 PTY sing 542 n n 
C5 O14 PTY sing 543 n n 
C5 HC51 PTY sing 544 n n 
C5 HC52 PTY sing 545 n n 
C6 O7 PTY sing 546 n n 
C6 HC6 PTY sing 547 n n 
O7 C8 PTY sing 548 n n 
C8 O10 PTY doub 549 n n 
C8 C11 PTY sing 550 n n 
C11 C12 PTY sing 551 n n 
C11 H111 PTY sing 552 n n 
C11 H112 PTY sing 553 n n 
C12 C13 PTY sing 554 n n 
C12 H121 PTY sing 555 n n 
C12 H122 PTY sing 556 n n 
C13 C14 PTY sing 557 n n 
C13 H131 PTY sing 558 n n 
C13 H132 PTY sing 559 n n 
C14 C15 PTY sing 560 n n 
C14 H141 PTY sing 561 n n 
C14 H142 PTY sing 562 n n 
C15 C16 PTY sing 563 n n 
C15 H151 PTY sing 564 n n 
C15 H152 PTY sing 565 n n 
C16 C17 PTY sing 566 n n 
C16 H161 PTY sing 567 n n 
C16 H162 PTY sing 568 n n 
C17 C18 PTY sing 569 n n 
C17 H171 PTY sing 570 n n 
C17 H172 PTY sing 571 n n 
C18 C19 PTY sing 572 n n 
C18 H181 PTY sing 573 n n 
C18 H182 PTY sing 574 n n 
C19 C20 PTY sing 575 n n 
C19 H191 PTY sing 576 n n 
C19 H192 PTY sing 577 n n 
C20 C21 PTY sing 578 n n 
C20 H201 PTY sing 579 n n 
C20 H202 PTY sing 580 n n 
C21 C22 PTY sing 581 n n 
C21 H211 PTY sing 582 n n 
C21 H212 PTY sing 583 n n 
C22 C23 PTY sing 584 n n 
C22 H221 PTY sing 585 n n 
C22 H222 PTY sing 586 n n 
C23 C24 PTY sing 587 n n 
C23 H231 PTY sing 588 n n 
C23 H232 PTY sing 589 n n 
C24 C25 PTY sing 590 n n 
C24 H241 PTY sing 591 n n 
C24 H242 PTY sing 592 n n 
C25 C26 PTY sing 593 n n 
C25 H251 PTY sing 594 n n 
C25 H252 PTY sing 595 n n 
C26 C27 PTY sing 596 n n 
C26 H261 PTY sing 597 n n 
C26 H262 PTY sing 598 n n 
C27 C28 PTY sing 599 n n 
C27 H271 PTY sing 600 n n 
C27 H272 PTY sing 601 n n 
C28 C29 PTY sing 602 n n 
C28 H281 PTY sing 603 n n 
C28 H282 PTY sing 604 n n 
C29 H291 PTY sing 605 n n 
C29 H292 PTY sing 606 n n 
C29 H293 PTY sing 607 n n 
C30 C31 PTY sing 608 n n 
C30 O30 PTY doub 609 n n 
C31 C32 PTY sing 610 n n 
C31 H311 PTY sing 611 n n 
C31 H312 PTY sing 612 n n 
C32 C33 PTY sing 613 n n 
C32 H321 PTY sing 614 n n 
C32 H322 PTY sing 615 n n 
C33 C34 PTY sing 616 n n 
C33 H331 PTY sing 617 n n 
C33 H332 PTY sing 618 n n 
C34 C35 PTY sing 619 n n 
C34 H341 PTY sing 620 n n 
C34 H342 PTY sing 621 n n 
C35 C36 PTY sing 622 n n 
C35 H351 PTY sing 623 n n 
C35 H352 PTY sing 624 n n 
C36 C37 PTY sing 625 n n 
C36 H361 PTY sing 626 n n 
C36 H362 PTY sing 627 n n 
C37 C38 PTY sing 628 n n 
C37 H371 PTY sing 629 n n 
C37 H372 PTY sing 630 n n 
C38 C39 PTY sing 631 n n 
C38 H381 PTY sing 632 n n 
C38 H382 PTY sing 633 n n 
C39 C40 PTY sing 634 n n 
C39 H391 PTY sing 635 n n 
C39 H392 PTY sing 636 n n 
C40 C41 PTY sing 637 n n 
C40 H401 PTY sing 638 n n 
C40 H402 PTY sing 639 n n 
C41 C42 PTY sing 640 n n 
C41 H411 PTY sing 641 n n 
C41 H412 PTY sing 642 n n 
C42 C43 PTY sing 643 n n 
C42 H421 PTY sing 644 n n 
C42 H422 PTY sing 645 n n 
C43 C44 PTY sing 646 n n 
C43 H431 PTY sing 647 n n 
C43 H432 PTY sing 648 n n 
C44 H441 PTY sing 649 n n 
C44 H442 PTY sing 650 n n 
C44 H443 PTY sing 651 n n 
P1 O11 PTY sing 652 n n 
P1 O12 PTY sing 653 n n 
P1 O13 PTY doub 654 n n 
P1 O14 PTY sing 655 n n 
O12 H12O PTY sing 656 n n 
N1 HN11 PTY sing 657 n n 
N1 HN12 PTY sing 658 n n 
#
_atom_sites.entry_id                     8WM5 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PTY A 1 601 601 PTY PTY . 
D 2 PTY A 1 602 701 PTY PTY . 
E 2 PTY B 1 601 601 PTY PTY . 
F 2 PTY B 1 602 701 PTY PTY . 
G 3 CDL B 1 603 601 CDL CDL . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PTY . . . F 2 120.268 128.065 147.366 1 26.58 ? C1 PTY 602 B 1 
HETATM 2 C C2 PTY . . . F 2 117.906 125.671 142.735 1 26.58 ? C2 PTY 602 B 1 
HETATM 3 C C3 PTY . . . F 2 117.708 127.029 142.073 1 26.58 ? C3 PTY 602 B 1 
HETATM 4 O O4 PTY . . . F 2 121.32 127.366 146.707 1 26.58 ? O4 PTY 602 B 1 
HETATM 5 C C5 PTY . . . F 2 119.503 128.525 145.032 1 26.58 ? C5 PTY 602 B 1 
HETATM 6 C C6 PTY . . . F 2 119.651 129.103 146.434 1 26.58 ? C6 PTY 602 B 1 
HETATM 7 O O7 PTY . . . F 2 120.481 130.26 146.373 1 26.58 ? O7 PTY 602 B 1 
HETATM 8 C C8 PTY . . . F 2 119.865 131.291 145.558 1 26.58 ? C8 PTY 602 B 1 
HETATM 9 O O10 PTY . . . F 2 119.545 131.022 144.413 1 26.58 ? O10 PTY 602 B 1 
HETATM 10 C C11 PTY . . . F 2 119.616 132.667 146.121 1 26.58 ? C11 PTY 602 B 1 
HETATM 11 C C12 PTY . . . F 2 119.674 133.696 144.999 1 26.58 ? C12 PTY 602 B 1 
HETATM 12 C C13 PTY . . . F 2 118.465 134.621 145.039 1 26.58 ? C13 PTY 602 B 1 
HETATM 13 C C14 PTY . . . F 2 118.454 135.55 143.833 1 26.58 ? C14 PTY 602 B 1 
HETATM 14 C C15 PTY . . . F 2 117.537 136.742 144.075 1 26.58 ? C15 PTY 602 B 1 
HETATM 15 C C16 PTY . . . F 2 116.176 136.518 143.433 1 26.58 ? C16 PTY 602 B 1 
HETATM 16 C C17 PTY . . . F 2 115.556 137.839 142.996 1 26.58 ? C17 PTY 602 B 1 
HETATM 17 C C30 PTY . . . F 2 121.878 126.17 147.315 1 26.58 ? C30 PTY 602 B 1 
HETATM 18 C C31 PTY . . . F 2 123.175 126.244 148.08 1 26.58 ? C31 PTY 602 B 1 
HETATM 19 O O30 PTY . . . F 2 121.287 125.11 147.199 1 26.58 ? O30 PTY 602 B 1 
HETATM 20 C C32 PTY . . . F 2 124.324 125.875 147.153 1 26.58 ? C32 PTY 602 B 1 
HETATM 21 C C33 PTY . . . F 2 125.655 126.282 147.77 1 26.58 ? C33 PTY 602 B 1 
HETATM 22 C C34 PTY . . . F 2 126.282 127.429 146.991 1 26.58 ? C34 PTY 602 B 1 
HETATM 23 C C35 PTY . . . F 2 127.072 128.344 147.917 1 26.58 ? C35 PTY 602 B 1 
HETATM 24 C C36 PTY . . . F 2 128.127 129.121 147.142 1 26.58 ? C36 PTY 602 B 1 
HETATM 25 C C37 PTY . . . F 2 129.424 129.211 147.935 1 26.58 ? C37 PTY 602 B 1 
HETATM 26 C C38 PTY . . . F 2 130.631 129.117 147.013 1 26.58 ? C38 PTY 602 B 1 
HETATM 27 C C39 PTY . . . F 2 131.04 127.665 146.803 1 26.58 ? C39 PTY 602 B 1 
HETATM 28 C C40 PTY . . . F 2 132.383 127.375 147.458 1 26.58 ? C40 PTY 602 B 1 
HETATM 29 C C41 PTY . . . F 2 132.924 126.025 147.008 1 26.58 ? C41 PTY 602 B 1 
HETATM 30 C C42 PTY . . . F 2 132.779 124.988 148.113 1 26.58 ? C42 PTY 602 B 1 
HETATM 31 C C43 PTY . . . F 2 132.344 123.642 147.547 1 26.58 ? C43 PTY 602 B 1 
HETATM 32 C C44 PTY . . . F 2 133.186 123.249 146.354 1 26.58 ? C44 PTY 602 B 1 
HETATM 33 P P1 PTY . . . F 2 118.599 129.417 142.715 1 26.58 ? P1 PTY 602 B 1 
HETATM 34 O O11 PTY . . . F 2 118.828 127.866 142.351 1 26.58 ? O11 PTY 602 B 1 
HETATM 35 O O12 PTY . . . F 2 119.27 130.256 141.656 1 26.58 ? O12 PTY 602 B 1 
HETATM 36 O O13 PTY . . . F 2 117.132 129.611 143.01 1 26.58 ? O13 PTY 602 B 1 
HETATM 37 O O14 PTY . . . F 2 119.412 129.594 144.093 1 26.58 ? O14 PTY 602 B 1 
HETATM 38 N N1 PTY . . . F 2 118.496 124.753 141.78 1 26.58 ? N1 PTY 602 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           38 
#