data_8WMU
#
_model_server_result.job_id            3W5Mg8yj9Ci8kNiq_nNTYw 
_model_server_result.datetime_utc      '2024-11-26 11:00:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wmu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":502}' 
#
_entry.id    8WMU 
#
_exptl.entry_id    8WMU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8WMU 
_cell.length_a            104.572 
_cell.length_b            157.618 
_cell.length_c            179.348 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WMU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 H N N 
? 6 M N N 
? 6 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? 
metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? 
metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? 
metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? 
metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? 
metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? 
metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? 
metalc ? metalc10 B OE1 GLN 11 B GLN 11 1_555 M MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc11 L O1A GDP . B GDP 501 1_555 M MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? 
metalc ? metalc12 M MG MG . B MG 502 1_555 W O HOH . B HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.877 ? 
metalc ? metalc13 C OD1 ASP 39 C ASP 39 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? 
metalc ? metalc14 C OD2 ASP 39 C ASP 39 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? 
metalc ? metalc15 C O THR 41 C THR 41 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? 
metalc ? metalc16 C OG1 THR 41 C THR 41 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc17 C O GLY 44 C GLY 44 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc18 C OE1 GLU 55 C GLU 55 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? 
metalc ? metalc19 C OE2 GLU 55 C GLU 55 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? 
metalc ? metalc20 P O1G GTP . C GTP 501 1_555 Q MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc21 P O1B GTP . C GTP 501 1_555 Q MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8WMU 
_atom_sites.fract_transf_matrix[1][1]    0.009563 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006344 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005576 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 5 GTP A 1 501 501 GTP GTP . 
H 6 MG A 1 502 502 MG MG . 
I 7 CA A 1 503 503 CA CA . 
J 8 GOL A 1 504 504 GOL GOL . 
K 9 PEG A 1 505 505 PEG PEG . 
L 10 GDP B 1 501 501 GDP GDP . 
M 6 MG B 1 502 502 MG MG . 
N 11 MES B 1 503 503 MES MES . 
O 12 A1D55 B 1 504 504 A1D55 B15 . 
P 5 GTP C 1 501 501 GTP GTP . 
Q 6 MG C 1 502 502 MG MG . 
R 7 CA C 1 503 503 CA CA . 
S 13 EDO C 1 504 504 EDO EDO . 
T 5 GTP D 1 501 501 GTP GTP . 
U 14 ACP F 1 401 401 ACP ACP . 
V 15 HOH A 1 601 73 HOH HOH . 
V 15 HOH A 2 602 133 HOH HOH . 
V 15 HOH A 3 603 164 HOH HOH . 
V 15 HOH A 4 604 45 HOH HOH . 
V 15 HOH A 5 605 177 HOH HOH . 
V 15 HOH A 6 606 7 HOH HOH . 
V 15 HOH A 7 607 99 HOH HOH . 
V 15 HOH A 8 608 91 HOH HOH . 
V 15 HOH A 9 609 188 HOH HOH . 
V 15 HOH A 10 610 102 HOH HOH . 
V 15 HOH A 11 611 173 HOH HOH . 
V 15 HOH A 12 612 192 HOH HOH . 
V 15 HOH A 13 613 51 HOH HOH . 
V 15 HOH A 14 614 194 HOH HOH . 
V 15 HOH A 15 615 95 HOH HOH . 
V 15 HOH A 16 616 49 HOH HOH . 
V 15 HOH A 17 617 136 HOH HOH . 
V 15 HOH A 18 618 172 HOH HOH . 
V 15 HOH A 19 619 115 HOH HOH . 
V 15 HOH A 20 620 230 HOH HOH . 
V 15 HOH A 21 621 201 HOH HOH . 
V 15 HOH A 22 622 262 HOH HOH . 
V 15 HOH A 23 623 252 HOH HOH . 
V 15 HOH A 24 624 256 HOH HOH . 
V 15 HOH A 25 625 250 HOH HOH . 
V 15 HOH A 26 626 251 HOH HOH . 
V 15 HOH A 27 627 118 HOH HOH . 
V 15 HOH A 28 628 232 HOH HOH . 
V 15 HOH A 29 629 249 HOH HOH . 
V 15 HOH A 30 630 253 HOH HOH . 
W 15 HOH B 1 601 202 HOH HOH . 
W 15 HOH B 2 602 235 HOH HOH . 
W 15 HOH B 3 603 114 HOH HOH . 
W 15 HOH B 4 604 90 HOH HOH . 
W 15 HOH B 5 605 196 HOH HOH . 
W 15 HOH B 6 606 47 HOH HOH . 
W 15 HOH B 7 607 11 HOH HOH . 
W 15 HOH B 8 608 184 HOH HOH . 
W 15 HOH B 9 609 24 HOH HOH . 
W 15 HOH B 10 610 79 HOH HOH . 
W 15 HOH B 11 611 180 HOH HOH . 
W 15 HOH B 12 612 5 HOH HOH . 
W 15 HOH B 13 613 48 HOH HOH . 
W 15 HOH B 14 614 211 HOH HOH . 
W 15 HOH B 15 615 76 HOH HOH . 
W 15 HOH B 16 616 14 HOH HOH . 
W 15 HOH B 17 617 143 HOH HOH . 
W 15 HOH B 18 618 229 HOH HOH . 
W 15 HOH B 19 619 248 HOH HOH . 
W 15 HOH B 20 620 86 HOH HOH . 
W 15 HOH B 21 621 106 HOH HOH . 
W 15 HOH B 22 622 41 HOH HOH . 
W 15 HOH B 23 623 247 HOH HOH . 
W 15 HOH B 24 624 96 HOH HOH . 
W 15 HOH B 25 625 126 HOH HOH . 
W 15 HOH B 26 626 44 HOH HOH . 
W 15 HOH B 27 627 193 HOH HOH . 
W 15 HOH B 28 628 212 HOH HOH . 
W 15 HOH B 29 629 261 HOH HOH . 
X 15 HOH C 1 601 52 HOH HOH . 
X 15 HOH C 2 602 1 HOH HOH . 
X 15 HOH C 3 603 67 HOH HOH . 
X 15 HOH C 4 604 61 HOH HOH . 
X 15 HOH C 5 605 170 HOH HOH . 
X 15 HOH C 6 606 78 HOH HOH . 
X 15 HOH C 7 607 8 HOH HOH . 
X 15 HOH C 8 608 112 HOH HOH . 
X 15 HOH C 9 609 2 HOH HOH . 
X 15 HOH C 10 610 146 HOH HOH . 
X 15 HOH C 11 611 16 HOH HOH . 
X 15 HOH C 12 612 113 HOH HOH . 
X 15 HOH C 13 613 46 HOH HOH . 
X 15 HOH C 14 614 119 HOH HOH . 
X 15 HOH C 15 615 128 HOH HOH . 
X 15 HOH C 16 616 6 HOH HOH . 
X 15 HOH C 17 617 71 HOH HOH . 
X 15 HOH C 18 618 199 HOH HOH . 
X 15 HOH C 19 619 83 HOH HOH . 
X 15 HOH C 20 620 38 HOH HOH . 
X 15 HOH C 21 621 171 HOH HOH . 
X 15 HOH C 22 622 181 HOH HOH . 
X 15 HOH C 23 623 97 HOH HOH . 
X 15 HOH C 24 624 231 HOH HOH . 
X 15 HOH C 25 625 54 HOH HOH . 
X 15 HOH C 26 626 30 HOH HOH . 
X 15 HOH C 27 627 75 HOH HOH . 
X 15 HOH C 28 628 77 HOH HOH . 
X 15 HOH C 29 629 175 HOH HOH . 
X 15 HOH C 30 630 154 HOH HOH . 
X 15 HOH C 31 631 17 HOH HOH . 
X 15 HOH C 32 632 82 HOH HOH . 
X 15 HOH C 33 633 3 HOH HOH . 
X 15 HOH C 34 634 84 HOH HOH . 
X 15 HOH C 35 635 155 HOH HOH . 
X 15 HOH C 36 636 37 HOH HOH . 
X 15 HOH C 37 637 89 HOH HOH . 
X 15 HOH C 38 638 122 HOH HOH . 
X 15 HOH C 39 639 100 HOH HOH . 
X 15 HOH C 40 640 21 HOH HOH . 
X 15 HOH C 41 641 176 HOH HOH . 
X 15 HOH C 42 642 189 HOH HOH . 
X 15 HOH C 43 643 260 HOH HOH . 
X 15 HOH C 44 644 121 HOH HOH . 
X 15 HOH C 45 645 210 HOH HOH . 
X 15 HOH C 46 646 227 HOH HOH . 
X 15 HOH C 47 647 207 HOH HOH . 
X 15 HOH C 48 648 185 HOH HOH . 
X 15 HOH C 49 649 111 HOH HOH . 
X 15 HOH C 50 650 224 HOH HOH . 
X 15 HOH C 51 651 162 HOH HOH . 
X 15 HOH C 52 652 168 HOH HOH . 
X 15 HOH C 53 653 156 HOH HOH . 
X 15 HOH C 54 654 255 HOH HOH . 
X 15 HOH C 55 655 134 HOH HOH . 
X 15 HOH C 56 656 219 HOH HOH . 
Y 15 HOH D 1 601 190 HOH HOH . 
Y 15 HOH D 2 602 12 HOH HOH . 
Y 15 HOH D 3 603 4 HOH HOH . 
Y 15 HOH D 4 604 200 HOH HOH . 
Y 15 HOH D 5 605 257 HOH HOH . 
Y 15 HOH D 6 606 208 HOH HOH . 
Z 15 HOH E 1 201 108 HOH HOH . 
Z 15 HOH E 2 202 120 HOH HOH . 
Z 15 HOH E 3 203 31 HOH HOH . 
Z 15 HOH E 4 204 226 HOH HOH . 
Z 15 HOH E 5 205 139 HOH HOH . 
Z 15 HOH E 6 206 254 HOH HOH . 
AA 15 HOH F 1 501 167 HOH HOH . 
AA 15 HOH F 2 502 244 HOH HOH . 
AA 15 HOH F 3 503 174 HOH HOH . 
AA 15 HOH F 4 504 259 HOH HOH . 
AA 15 HOH F 5 505 258 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         M 
_atom_site.label_entity_id       6 
_atom_site.Cartn_x               -14.97 
_atom_site.Cartn_y               47.434 
_atom_site.Cartn_z               -14.287 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        22.63 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           502 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    36 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#