data_8WSA
#
_model_server_result.job_id            JCIq7Fk6hAIjNuO47IVw2w 
_model_server_result.datetime_utc      '2025-03-01 19:27:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wsa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"X","auth_seq_id":201}' 
#
_entry.id    8WSA 
#
_exptl.entry_id    8WSA 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              426.673 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(3R)-3-(dodecanoyloxy)tetradecanoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8WSA 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WSA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 R N N 
? 6 X N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 3 A CYS 28 1_555 A SG CYS 14 A CYS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf2 A SG CYS 255 A CYS 280 1_555 A SG CYS 279 A CYS 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf3 A SG CYS 363 A CYS 388 1_555 A SG CYS 364 A CYS 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 555 A CYS 580 1_555 A SG CYS 581 A CYS 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf5 B SG CYS 3 B CYS 28 1_555 B SG CYS 14 B CYS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf6 B SG CYS 255 B CYS 280 1_555 B SG CYS 279 B CYS 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf7 B SG CYS 363 B CYS 388 1_555 B SG CYS 364 B CYS 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf8 B SG CYS 555 B CYS 580 1_555 B SG CYS 581 B CYS 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf9 C SG CYS 7 C CYS 25 1_555 C SG CYS 33 C CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf10 C SG CYS 19 C CYS 37 1_555 C SG CYS 130 C CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
disulf ? disulf11 C SG CYS 77 C CYS 95 1_555 C SG CYS 87 C CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf12 D SG CYS 7 D CYS 25 1_555 D SG CYS 33 D CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf13 D SG CYS 19 D CYS 37 1_555 D SG CYS 130 D CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
disulf ? disulf14 D SG CYS 77 D CYS 95 1_555 D SG CYS 87 D CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
covale ? covale1 A ND2 ASN 179 A ASN 204 1_555 I C1 NAG . A NAG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale2 A ND2 ASN 212 A ASN 237 1_555 J C1 NAG . A NAG 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale3 A ND2 ASN 499 A ASN 524 1_555 G C1 NAG . A NAG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale4 A ND2 ASN 547 A ASN 572 1_555 K C1 NAG . A NAG 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale5 E N2 GP4 . A GP4 701 1_555 R C1 2IL . C 2IL 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.287 ? 
covale ? covale6 E C3 GP4 . A GP4 701 1_555 S O3E 0IL . C 0IL 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
covale ? covale7 E C1 GP4 . A GP4 701 1_555 T OXT X6N . C X6N 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? 
covale ? covale8 F O52 A1L01 . A A1L01 702 1_555 Z C6 X6N . D X6N 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? 
covale ? covale9 B ND2 ASN 179 B ASN 204 1_555 O C1 NAG . B NAG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale10 B ND2 ASN 212 B ASN 237 1_555 P C1 NAG . B NAG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale11 B ND2 ASN 499 B ASN 524 1_555 M C1 NAG . B NAG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale12 B ND2 ASN 547 B ASN 572 1_555 Q C1 NAG . B NAG 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale13 L N2 GP4 . B GP4 701 1_555 X C1 2IL . D 2IL 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.287 ? 
covale ? covale14 L C3 GP4 . B GP4 701 1_555 Y O3E 0IL . D 0IL 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale15 L C1 GP4 . B GP4 701 1_555 Z OXT X6N . D X6N 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? 
covale ? covale16 C ND2 ASN 96 C ASN 114 1_555 W C1 NAG . C NAG 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
covale ? covale17 C ND2 ASN 132 C ASN 150 1_555 V C1 NAG . C NAG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale18 T C6 X6N . C X6N 203 1_555 U O52 A1L01 . C A1L01 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? 
covale ? covale19 D ND2 ASN 96 D ASN 114 1_555 BA C1 NAG . D NAG 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale20 D ND2 ASN 132 D ASN 150 1_555 AA C1 NAG . D NAG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
#
_chem_comp.formula           'C26 H50 O4' 
_chem_comp.formula_weight    426.673 
_chem_comp.id                2IL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(3R)-3-(dodecanoyloxy)tetradecanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C1 2IL doub 86 n n 
O1 C1 2IL sing 87 n n 
C1 C2 2IL sing 88 n n 
O1 HO1 2IL sing 89 n n 
C3 C2 2IL sing 90 n n 
C2 H2 2IL sing 91 n n 
C2 H2A 2IL sing 92 n n 
C4 C3 2IL sing 93 n n 
C3 O3 2IL sing 94 n n 
C3 H3 2IL sing 95 n n 
O3 C15 2IL sing 96 n n 
C5 C4 2IL sing 97 n n 
C4 H4 2IL sing 98 n n 
C4 H4A 2IL sing 99 n n 
O4 C15 2IL doub 100 n n 
C6 C5 2IL sing 101 n n 
C5 H5 2IL sing 102 n n 
C5 H5A 2IL sing 103 n n 
C7 C6 2IL sing 104 n n 
C6 H6 2IL sing 105 n n 
C6 H6A 2IL sing 106 n n 
C8 C7 2IL sing 107 n n 
C7 H7 2IL sing 108 n n 
C7 H7A 2IL sing 109 n n 
C9 C8 2IL sing 110 n n 
C8 H8 2IL sing 111 n n 
C8 H8A 2IL sing 112 n n 
C10 C9 2IL sing 113 n n 
C9 H9 2IL sing 114 n n 
C9 H9A 2IL sing 115 n n 
C11 C10 2IL sing 116 n n 
C10 H10 2IL sing 117 n n 
C10 H10A 2IL sing 118 n n 
C12 C11 2IL sing 119 n n 
C11 H11 2IL sing 120 n n 
C11 H11A 2IL sing 121 n n 
C13 C12 2IL sing 122 n n 
C12 H12 2IL sing 123 n n 
C12 H12A 2IL sing 124 n n 
C14 C13 2IL sing 125 n n 
C13 H13 2IL sing 126 n n 
C13 H13A 2IL sing 127 n n 
C14 H14 2IL sing 128 n n 
C14 H14A 2IL sing 129 n n 
C14 H14B 2IL sing 130 n n 
C15 C16 2IL sing 131 n n 
C17 C16 2IL sing 132 n n 
C16 H16 2IL sing 133 n n 
C16 H16A 2IL sing 134 n n 
C18 C17 2IL sing 135 n n 
C17 H17 2IL sing 136 n n 
C17 H17A 2IL sing 137 n n 
C19 C18 2IL sing 138 n n 
C18 H18 2IL sing 139 n n 
C18 H18A 2IL sing 140 n n 
C20 C19 2IL sing 141 n n 
C19 H19 2IL sing 142 n n 
C19 H19A 2IL sing 143 n n 
C21 C20 2IL sing 144 n n 
C20 H20 2IL sing 145 n n 
C20 H20A 2IL sing 146 n n 
C22 C21 2IL sing 147 n n 
C21 H21 2IL sing 148 n n 
C21 H21A 2IL sing 149 n n 
C23 C22 2IL sing 150 n n 
C22 H22 2IL sing 151 n n 
C22 H22A 2IL sing 152 n n 
C24 C23 2IL sing 153 n n 
C23 H23 2IL sing 154 n n 
C23 H23A 2IL sing 155 n n 
C25 C24 2IL sing 156 n n 
C24 H24 2IL sing 157 n n 
C24 H24A 2IL sing 158 n n 
C26 C25 2IL sing 159 n n 
C25 H25 2IL sing 160 n n 
C25 H25A 2IL sing 161 n n 
C26 H26 2IL sing 162 n n 
C26 H26A 2IL sing 163 n n 
C26 H26B 2IL sing 164 n n 
#
_atom_sites.entry_id                     8WSA 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 GP4 A 1 701 706 GP4 GP4 . 
F 4 A1L01 A 1 702 206 A1L01 A1L . 
G 5 NAG A 1 703 701 NAG NAG . 
H 5 NAG A 1 704 702 NAG NAG . 
I 5 NAG A 1 705 703 NAG NAG . 
J 5 NAG A 1 706 704 NAG NAG . 
K 5 NAG A 1 707 705 NAG NAG . 
L 3 GP4 B 1 701 706 GP4 GP4 . 
M 5 NAG B 1 702 701 NAG NAG . 
N 5 NAG B 1 703 702 NAG NAG . 
O 5 NAG B 1 704 703 NAG NAG . 
P 5 NAG B 1 705 704 NAG NAG . 
Q 5 NAG B 1 706 705 NAG NAG . 
R 6 2IL C 1 201 203 2IL 2IL . 
S 7 0IL C 1 202 204 0IL 0IL . 
T 8 X6N C 1 203 205 X6N X6N . 
U 4 A1L01 C 1 204 206 A1L01 A1L . 
V 5 NAG C 1 205 201 NAG NAG . 
W 5 NAG C 1 206 202 NAG NAG . 
X 6 2IL D 1 201 203 2IL 2IL . 
Y 7 0IL D 1 202 204 0IL 0IL . 
Z 8 X6N D 1 203 205 X6N X6N . 
AA 5 NAG D 1 204 201 NAG NAG . 
BA 5 NAG D 1 205 202 NAG NAG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 2IL . . . X 6 192.604 163.456 177.309 1 97.76 ? C1 2IL 201 D 1 
HETATM 2 C C2 2IL . . . X 6 193.083 162.046 177.601 1 97.76 ? C2 2IL 201 D 1 
HETATM 3 O O2 2IL . . . X 6 191.871 163.715 176.112 1 97.76 ? O2 2IL 201 D 1 
HETATM 4 C C3 2IL . . . X 6 194.289 161.754 176.715 1 97.76 ? C3 2IL 201 D 1 
HETATM 5 O O3 2IL . . . X 6 193.945 161.788 175.328 1 97.76 ? O3 2IL 201 D 1 
HETATM 6 C C4 2IL . . . X 6 194.791 160.36 177.047 1 97.76 ? C4 2IL 201 D 1 
HETATM 7 O O4 2IL . . . X 6 194.892 164.056 175.147 1 97.76 ? O4 2IL 201 D 1 
HETATM 8 C C5 2IL . . . X 6 196.301 160.428 177.257 1 97.76 ? C5 2IL 201 D 1 
HETATM 9 C C6 2IL . . . X 6 196.956 159.166 176.703 1 97.76 ? C6 2IL 201 D 1 
HETATM 10 C C7 2IL . . . X 6 198.405 159.483 176.332 1 97.76 ? C7 2IL 201 D 1 
HETATM 11 C C8 2IL . . . X 6 199.142 158.17 176.078 1 97.76 ? C8 2IL 201 D 1 
HETATM 12 C C9 2IL . . . X 6 200.62 158.467 175.823 1 97.76 ? C9 2IL 201 D 1 
HETATM 13 C C10 2IL . . . X 6 201.381 157.14 175.825 1 97.76 ? C10 2IL 201 D 1 
HETATM 14 C C11 2IL . . . X 6 202.688 157.285 175.048 1 97.76 ? C11 2IL 201 D 1 
HETATM 15 C C12 2IL . . . X 6 203.095 155.903 174.535 1 97.76 ? C12 2IL 201 D 1 
HETATM 16 C C13 2IL . . . X 6 204.609 155.841 174.347 1 97.76 ? C13 2IL 201 D 1 
HETATM 17 C C14 2IL . . . X 6 205.079 154.394 174.515 1 97.76 ? C14 2IL 201 D 1 
HETATM 18 C C15 2IL . . . X 6 194.477 162.841 174.521 1 97.76 ? C15 2IL 201 D 1 
HETATM 19 C C16 2IL . . . X 6 194.585 162.694 173.009 1 97.76 ? C16 2IL 201 D 1 
HETATM 20 C C17 2IL . . . X 6 194.504 161.213 172.629 1 97.76 ? C17 2IL 201 D 1 
HETATM 21 C C18 2IL . . . X 6 195.402 160.951 171.421 1 97.76 ? C18 2IL 201 D 1 
HETATM 22 C C19 2IL . . . X 6 196.424 159.878 171.789 1 97.76 ? C19 2IL 201 D 1 
HETATM 23 C C20 2IL . . . X 6 196.964 159.228 170.519 1 97.76 ? C20 2IL 201 D 1 
HETATM 24 C C21 2IL . . . X 6 195.954 158.189 170.048 1 97.76 ? C21 2IL 201 D 1 
HETATM 25 C C22 2IL . . . X 6 196.701 156.919 169.635 1 97.76 ? C22 2IL 201 D 1 
HETATM 26 C C23 2IL . . . X 6 195.749 156.022 168.84 1 97.76 ? C23 2IL 201 D 1 
HETATM 27 C C24 2IL . . . X 6 196.375 154.643 168.666 1 97.76 ? C24 2IL 201 D 1 
HETATM 28 C C25 2IL . . . X 6 195.453 153.608 169.313 1 97.76 ? C25 2IL 201 D 1 
HETATM 29 C C26 2IL . . . X 6 196.289 152.424 169.809 1 97.76 ? C26 2IL 201 D 1 
#
_model_server_stats.io_time_ms              38 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           29 
#