data_8WSA
#
_model_server_result.job_id            DZXfyku51PYmOghElKG4-Q 
_model_server_result.datetime_utc      '2024-11-23 07:06:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wsa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"T","auth_seq_id":203}' 
#
_entry.id    8WSA 
#
_exptl.entry_id    8WSA 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              426.673 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(3R)-3-(dodecanoyloxy)tetradecanoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8WSA 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WSA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 C CYS 25 1_555 A SG CYS 33 C CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 19 C CYS 37 1_555 A SG CYS 130 C CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
disulf ? disulf3 A SG CYS 77 C CYS 95 1_555 A SG CYS 87 C CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf4 B SG CYS 3 A CYS 28 1_555 B SG CYS 14 A CYS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf5 B SG CYS 255 A CYS 280 1_555 B SG CYS 279 A CYS 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf6 B SG CYS 363 A CYS 388 1_555 B SG CYS 364 A CYS 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf7 B SG CYS 555 A CYS 580 1_555 B SG CYS 581 A CYS 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf8 C SG CYS 7 D CYS 25 1_555 C SG CYS 33 D CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf9 C SG CYS 19 D CYS 37 1_555 C SG CYS 130 D CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
disulf ? disulf10 C SG CYS 77 D CYS 95 1_555 C SG CYS 87 D CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf11 D SG CYS 3 B CYS 28 1_555 D SG CYS 14 B CYS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf12 D SG CYS 255 B CYS 280 1_555 D SG CYS 279 B CYS 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf13 D SG CYS 363 B CYS 388 1_555 D SG CYS 364 B CYS 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf14 D SG CYS 555 B CYS 580 1_555 D SG CYS 581 B CYS 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
covale ? covale1 A ND2 ASN 96 C ASN 114 1_555 F C1 NAG . C NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
covale ? covale2 A ND2 ASN 132 C ASN 150 1_555 E C1 NAG . C NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale3 G C1 2IL . C 2IL 203 1_555 P N2 GP4 . A GP4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.287 ? 
covale ? covale4 H O3E 0IL . C 0IL 204 1_555 P C3 GP4 . A GP4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
covale ? covale5 I C6 X6N . C X6N 205 1_555 J O52 A1L01 . C A1L01 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? 
covale ? covale6 I OXT X6N . C X6N 205 1_555 P C1 GP4 . A GP4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? 
covale ? covale7 B ND2 ASN 179 A ASN 204 1_555 M C1 NAG . A NAG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale8 B ND2 ASN 212 A ASN 237 1_555 N C1 NAG . A NAG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale9 B ND2 ASN 499 A ASN 524 1_555 K C1 NAG . A NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale10 B ND2 ASN 547 A ASN 572 1_555 O C1 NAG . A NAG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale11 Q O52 A1L01 . A A1L01 707 1_555 V C6 X6N . D X6N 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? 
covale ? covale12 C ND2 ASN 96 D ASN 114 1_555 S C1 NAG . D NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale13 C ND2 ASN 132 D ASN 150 1_555 R C1 NAG . D NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale14 T C1 2IL . D 2IL 203 1_555 BA N2 GP4 . B GP4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.288 ? 
covale ? covale15 U O3E 0IL . D 0IL 204 1_555 BA C3 GP4 . B GP4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
covale ? covale16 V OXT X6N . D X6N 205 1_555 BA C1 GP4 . B GP4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? 
covale ? covale17 D ND2 ASN 179 B ASN 204 1_555 Y C1 NAG . B NAG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale18 D ND2 ASN 212 B ASN 237 1_555 Z C1 NAG . B NAG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale19 D ND2 ASN 499 B ASN 524 1_555 W C1 NAG . B NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale20 D ND2 ASN 547 B ASN 572 1_555 AA C1 NAG . B NAG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
#
_chem_comp.formula           'C26 H50 O4' 
_chem_comp.formula_weight    426.673 
_chem_comp.id                2IL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(3R)-3-(dodecanoyloxy)tetradecanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C1 2IL doub 86 n n 
O1 C1 2IL sing 87 n n 
C1 C2 2IL sing 88 n n 
O1 HO1 2IL sing 89 n n 
C3 C2 2IL sing 90 n n 
C2 H2 2IL sing 91 n n 
C2 H2A 2IL sing 92 n n 
C4 C3 2IL sing 93 n n 
C3 O3 2IL sing 94 n n 
C3 H3 2IL sing 95 n n 
O3 C15 2IL sing 96 n n 
C5 C4 2IL sing 97 n n 
C4 H4 2IL sing 98 n n 
C4 H4A 2IL sing 99 n n 
O4 C15 2IL doub 100 n n 
C6 C5 2IL sing 101 n n 
C5 H5 2IL sing 102 n n 
C5 H5A 2IL sing 103 n n 
C7 C6 2IL sing 104 n n 
C6 H6 2IL sing 105 n n 
C6 H6A 2IL sing 106 n n 
C8 C7 2IL sing 107 n n 
C7 H7 2IL sing 108 n n 
C7 H7A 2IL sing 109 n n 
C9 C8 2IL sing 110 n n 
C8 H8 2IL sing 111 n n 
C8 H8A 2IL sing 112 n n 
C10 C9 2IL sing 113 n n 
C9 H9 2IL sing 114 n n 
C9 H9A 2IL sing 115 n n 
C11 C10 2IL sing 116 n n 
C10 H10 2IL sing 117 n n 
C10 H10A 2IL sing 118 n n 
C12 C11 2IL sing 119 n n 
C11 H11 2IL sing 120 n n 
C11 H11A 2IL sing 121 n n 
C13 C12 2IL sing 122 n n 
C12 H12 2IL sing 123 n n 
C12 H12A 2IL sing 124 n n 
C14 C13 2IL sing 125 n n 
C13 H13 2IL sing 126 n n 
C13 H13A 2IL sing 127 n n 
C14 H14 2IL sing 128 n n 
C14 H14A 2IL sing 129 n n 
C14 H14B 2IL sing 130 n n 
C15 C16 2IL sing 131 n n 
C17 C16 2IL sing 132 n n 
C16 H16 2IL sing 133 n n 
C16 H16A 2IL sing 134 n n 
C18 C17 2IL sing 135 n n 
C17 H17 2IL sing 136 n n 
C17 H17A 2IL sing 137 n n 
C19 C18 2IL sing 138 n n 
C18 H18 2IL sing 139 n n 
C18 H18A 2IL sing 140 n n 
C20 C19 2IL sing 141 n n 
C19 H19 2IL sing 142 n n 
C19 H19A 2IL sing 143 n n 
C21 C20 2IL sing 144 n n 
C20 H20 2IL sing 145 n n 
C20 H20A 2IL sing 146 n n 
C22 C21 2IL sing 147 n n 
C21 H21 2IL sing 148 n n 
C21 H21A 2IL sing 149 n n 
C23 C22 2IL sing 150 n n 
C22 H22 2IL sing 151 n n 
C22 H22A 2IL sing 152 n n 
C24 C23 2IL sing 153 n n 
C23 H23 2IL sing 154 n n 
C23 H23A 2IL sing 155 n n 
C25 C24 2IL sing 156 n n 
C24 H24 2IL sing 157 n n 
C24 H24A 2IL sing 158 n n 
C26 C25 2IL sing 159 n n 
C25 H25 2IL sing 160 n n 
C25 H25A 2IL sing 161 n n 
C26 H26 2IL sing 162 n n 
C26 H26A 2IL sing 163 n n 
C26 H26B 2IL sing 164 n n 
#
_atom_sites.entry_id                     8WSA 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 NAG C 1 201 302 NAG NAG . 
F 3 NAG C 1 202 303 NAG NAG . 
G 4 2IL C 1 203 1 2IL LM5 . 
H 5 0IL C 1 204 1 0IL LM5 . 
I 6 X6N C 1 205 1 X6N LM5 . 
J 7 A1L01 C 1 206 1 A1L01 LM5 . 
K 3 NAG A 1 701 621 NAG NAG . 
L 3 NAG A 1 702 626 NAG NAG . 
M 3 NAG A 1 703 629 NAG NAG . 
N 3 NAG A 1 704 630 NAG NAG . 
O 3 NAG A 1 705 631 NAG NAG . 
P 8 GP4 A 1 706 1 GP4 LM5 . 
Q 7 A1L01 A 1 707 2 A1L01 LM5 . 
R 3 NAG D 1 201 302 NAG NAG . 
S 3 NAG D 1 202 303 NAG NAG . 
T 4 2IL D 1 203 2 2IL LM5 . 
U 5 0IL D 1 204 2 0IL LM5 . 
V 6 X6N D 1 205 2 X6N LM5 . 
W 3 NAG B 1 701 621 NAG NAG . 
X 3 NAG B 1 702 626 NAG NAG . 
Y 3 NAG B 1 703 629 NAG NAG . 
Z 3 NAG B 1 704 630 NAG NAG . 
AA 3 NAG B 1 705 631 NAG NAG . 
BA 8 GP4 B 1 706 2 GP4 LM5 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 2IL . . . T 4 192.81 163.479 177.552 1 97.65 ? C1 2IL 203 D 1 
HETATM 2 C C2 2IL . . . T 4 193.31 162.077 177.839 1 97.65 ? C2 2IL 203 D 1 
HETATM 3 O O2 2IL . . . T 4 192.053 163.728 176.368 1 97.65 ? O2 2IL 203 D 1 
HETATM 4 C C3 2IL . . . T 4 194.502 161.795 176.932 1 97.65 ? C3 2IL 203 D 1 
HETATM 5 O O3 2IL . . . T 4 194.133 161.822 175.552 1 97.65 ? O3 2IL 203 D 1 
HETATM 6 C C4 2IL . . . T 4 195.025 160.408 177.257 1 97.65 ? C4 2IL 203 D 1 
HETATM 7 O O4 2IL . . . T 4 195.052 164.1 175.349 1 97.65 ? O4 2IL 203 D 1 
HETATM 8 C C5 2IL . . . T 4 196.538 160.492 177.44 1 97.65 ? C5 2IL 203 D 1 
HETATM 9 C C6 2IL . . . T 4 197.196 159.237 176.878 1 97.65 ? C6 2IL 203 D 1 
HETATM 10 C C7 2IL . . . T 4 198.634 159.568 176.48 1 97.65 ? C7 2IL 203 D 1 
HETATM 11 C C8 2IL . . . T 4 199.382 158.263 176.215 1 97.65 ? C8 2IL 203 D 1 
HETATM 12 C C9 2IL . . . T 4 200.852 158.574 175.934 1 97.65 ? C9 2IL 203 D 1 
HETATM 13 C C10 2IL . . . T 4 201.626 157.257 175.924 1 97.65 ? C10 2IL 203 D 1 
HETATM 14 C C11 2IL . . . T 4 202.918 157.414 175.124 1 97.65 ? C11 2IL 203 D 1 
HETATM 15 C C12 2IL . . . T 4 203.332 156.035 174.606 1 97.65 ? C12 2IL 203 D 1 
HETATM 16 C C13 2IL . . . T 4 204.843 155.989 174.392 1 97.65 ? C13 2IL 203 D 1 
HETATM 17 C C14 2IL . . . T 4 205.33 154.547 174.554 1 97.65 ? C14 2IL 203 D 1 
HETATM 18 C C15 2IL . . . T 4 194.64 162.879 174.733 1 97.65 ? C15 2IL 203 D 1 
HETATM 19 C C16 2IL . . . T 4 194.722 162.73 173.219 1 97.65 ? C16 2IL 203 D 1 
HETATM 20 C C17 2IL . . . T 4 194.65 161.248 172.844 1 97.65 ? C17 2IL 203 D 1 
HETATM 21 C C18 2IL . . . T 4 195.53 160.993 171.62 1 97.65 ? C18 2IL 203 D 1 
HETATM 22 C C19 2IL . . . T 4 196.57 159.932 171.973 1 97.65 ? C19 2IL 203 D 1 
HETATM 23 C C20 2IL . . . T 4 197.093 159.285 170.695 1 97.65 ? C20 2IL 203 D 1 
HETATM 24 C C21 2IL . . . T 4 196.087 158.233 170.243 1 97.65 ? C21 2IL 203 D 1 
HETATM 25 C C22 2IL . . . T 4 196.839 156.971 169.819 1 97.65 ? C22 2IL 203 D 1 
HETATM 26 C C23 2IL . . . T 4 195.883 156.063 169.044 1 97.65 ? C23 2IL 203 D 1 
HETATM 27 C C24 2IL . . . T 4 196.521 154.69 168.861 1 97.65 ? C24 2IL 203 D 1 
HETATM 28 C C25 2IL . . . T 4 195.623 153.646 169.526 1 97.65 ? C25 2IL 203 D 1 
HETATM 29 C C26 2IL . . . T 4 196.48 152.472 170.01 1 97.65 ? C26 2IL 203 D 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    33 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           29 
#