data_8WSA
#
_model_server_result.job_id            5zMp9L_-D1GjU-MBOdte_Q 
_model_server_result.datetime_utc      '2024-11-05 08:33:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8wsa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":206}' 
#
_entry.id    8WSA 
#
_exptl.entry_id    8WSA 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              398.62 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(3~{S})-3-decanoyloxytetradecanoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8WSA 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8WSA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 J N N 
? 7 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 C CYS 25 1_555 A SG CYS 33 C CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 19 C CYS 37 1_555 A SG CYS 130 C CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
disulf ? disulf3 A SG CYS 77 C CYS 95 1_555 A SG CYS 87 C CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf4 B SG CYS 3 A CYS 28 1_555 B SG CYS 14 A CYS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf5 B SG CYS 255 A CYS 280 1_555 B SG CYS 279 A CYS 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf6 B SG CYS 363 A CYS 388 1_555 B SG CYS 364 A CYS 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf7 B SG CYS 555 A CYS 580 1_555 B SG CYS 581 A CYS 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf8 C SG CYS 7 D CYS 25 1_555 C SG CYS 33 D CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf9 C SG CYS 19 D CYS 37 1_555 C SG CYS 130 D CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
disulf ? disulf10 C SG CYS 77 D CYS 95 1_555 C SG CYS 87 D CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf11 D SG CYS 3 B CYS 28 1_555 D SG CYS 14 B CYS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf12 D SG CYS 255 B CYS 280 1_555 D SG CYS 279 B CYS 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf13 D SG CYS 363 B CYS 388 1_555 D SG CYS 364 B CYS 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf14 D SG CYS 555 B CYS 580 1_555 D SG CYS 581 B CYS 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
covale ? covale1 A ND2 ASN 96 C ASN 114 1_555 F C1 NAG . C NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
covale ? covale2 A ND2 ASN 132 C ASN 150 1_555 E C1 NAG . C NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale3 G C1 2IL . C 2IL 203 1_555 P N2 GP4 . A GP4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.287 ? 
covale ? covale4 H O3E 0IL . C 0IL 204 1_555 P C3 GP4 . A GP4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
covale ? covale5 I C6 X6N . C X6N 205 1_555 J O52 A1L01 . C A1L01 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? 
covale ? covale6 I OXT X6N . C X6N 205 1_555 P C1 GP4 . A GP4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? 
covale ? covale7 B ND2 ASN 179 A ASN 204 1_555 M C1 NAG . A NAG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale8 B ND2 ASN 212 A ASN 237 1_555 N C1 NAG . A NAG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale9 B ND2 ASN 499 A ASN 524 1_555 K C1 NAG . A NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale10 B ND2 ASN 547 A ASN 572 1_555 O C1 NAG . A NAG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale11 Q O52 A1L01 . A A1L01 707 1_555 V C6 X6N . D X6N 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? 
covale ? covale12 C ND2 ASN 96 D ASN 114 1_555 S C1 NAG . D NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale13 C ND2 ASN 132 D ASN 150 1_555 R C1 NAG . D NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale14 T C1 2IL . D 2IL 203 1_555 BA N2 GP4 . B GP4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.288 ? 
covale ? covale15 U O3E 0IL . D 0IL 204 1_555 BA C3 GP4 . B GP4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
covale ? covale16 V OXT X6N . D X6N 205 1_555 BA C1 GP4 . B GP4 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? 
covale ? covale17 D ND2 ASN 179 B ASN 204 1_555 Y C1 NAG . B NAG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale18 D ND2 ASN 212 B ASN 237 1_555 Z C1 NAG . B NAG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale19 D ND2 ASN 499 B ASN 524 1_555 W C1 NAG . B NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale20 D ND2 ASN 547 B ASN 572 1_555 AA C1 NAG . B NAG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
#
_chem_comp.formula           'C24 H46 O4' 
_chem_comp.formula_weight    398.62 
_chem_comp.id                A1L01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(3~{S})-3-decanoyloxytetradecanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O52 C35 A1L01 doub 165 n n 
C35 O72 A1L01 sing 166 n n 
C35 C73 A1L01 sing 167 n n 
C73 C125 A1L01 sing 168 n n 
C246 C252 A1L01 sing 169 n n 
C246 C125 A1L01 sing 170 n n 
C252 C255 A1L01 sing 171 n n 
C125 O240 A1L01 sing 172 n n 
C255 C258 A1L01 sing 173 n n 
C258 C261 A1L01 sing 174 n n 
O248 C243 A1L01 doub 175 n n 
C270 C273 A1L01 sing 176 n n 
C270 C267 A1L01 sing 177 n n 
O240 C243 A1L01 sing 178 n n 
C264 C261 A1L01 sing 179 n n 
C264 C267 A1L01 sing 180 n n 
C243 C249 A1L01 sing 181 n n 
C273 C276 A1L01 sing 182 n n 
C276 C279 A1L01 sing 183 n n 
C249 C281 A1L01 sing 184 n n 
C281 C285 A1L01 sing 185 n n 
C285 C288 A1L01 sing 186 n n 
C288 C291 A1L01 sing 187 n n 
C297 C300 A1L01 sing 188 n n 
C297 C294 A1L01 sing 189 n n 
C291 C294 A1L01 sing 190 n n 
C300 C302 A1L01 sing 191 n n 
C73 H1 A1L01 sing 192 n n 
C73 H2 A1L01 sing 193 n n 
O72 H3 A1L01 sing 194 n n 
C125 H4 A1L01 sing 195 n n 
C246 H5 A1L01 sing 196 n n 
C246 H6 A1L01 sing 197 n n 
C249 H7 A1L01 sing 198 n n 
C249 H8 A1L01 sing 199 n n 
C252 H9 A1L01 sing 200 n n 
C252 H10 A1L01 sing 201 n n 
C255 H11 A1L01 sing 202 n n 
C255 H12 A1L01 sing 203 n n 
C258 H13 A1L01 sing 204 n n 
C258 H14 A1L01 sing 205 n n 
C261 H15 A1L01 sing 206 n n 
C261 H16 A1L01 sing 207 n n 
C264 H17 A1L01 sing 208 n n 
C264 H18 A1L01 sing 209 n n 
C267 H19 A1L01 sing 210 n n 
C267 H20 A1L01 sing 211 n n 
C270 H21 A1L01 sing 212 n n 
C270 H22 A1L01 sing 213 n n 
C273 H23 A1L01 sing 214 n n 
C273 H24 A1L01 sing 215 n n 
C276 H25 A1L01 sing 216 n n 
C276 H26 A1L01 sing 217 n n 
C279 H27 A1L01 sing 218 n n 
C279 H28 A1L01 sing 219 n n 
C279 H29 A1L01 sing 220 n n 
C281 H30 A1L01 sing 221 n n 
C281 H31 A1L01 sing 222 n n 
C285 H32 A1L01 sing 223 n n 
C285 H33 A1L01 sing 224 n n 
C288 H34 A1L01 sing 225 n n 
C288 H35 A1L01 sing 226 n n 
C291 H36 A1L01 sing 227 n n 
C291 H37 A1L01 sing 228 n n 
C294 H38 A1L01 sing 229 n n 
C294 H39 A1L01 sing 230 n n 
C297 H40 A1L01 sing 231 n n 
C297 H41 A1L01 sing 232 n n 
C300 H42 A1L01 sing 233 n n 
C300 H43 A1L01 sing 234 n n 
C302 H44 A1L01 sing 235 n n 
C302 H45 A1L01 sing 236 n n 
C302 H46 A1L01 sing 237 n n 
#
_atom_sites.entry_id                     8WSA 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 NAG C 1 201 302 NAG NAG . 
F 3 NAG C 1 202 303 NAG NAG . 
G 4 2IL C 1 203 1 2IL LM5 . 
H 5 0IL C 1 204 1 0IL LM5 . 
I 6 X6N C 1 205 1 X6N LM5 . 
J 7 A1L01 C 1 206 1 A1L01 LM5 . 
K 3 NAG A 1 701 621 NAG NAG . 
L 3 NAG A 1 702 626 NAG NAG . 
M 3 NAG A 1 703 629 NAG NAG . 
N 3 NAG A 1 704 630 NAG NAG . 
O 3 NAG A 1 705 631 NAG NAG . 
P 8 GP4 A 1 706 1 GP4 LM5 . 
Q 7 A1L01 A 1 707 2 A1L01 LM5 . 
R 3 NAG D 1 201 302 NAG NAG . 
S 3 NAG D 1 202 303 NAG NAG . 
T 4 2IL D 1 203 2 2IL LM5 . 
U 5 0IL D 1 204 2 0IL LM5 . 
V 6 X6N D 1 205 2 X6N LM5 . 
W 3 NAG B 1 701 621 NAG NAG . 
X 3 NAG B 1 702 626 NAG NAG . 
Y 3 NAG B 1 703 629 NAG NAG . 
Z 3 NAG B 1 704 630 NAG NAG . 
AA 3 NAG B 1 705 631 NAG NAG . 
BA 8 GP4 B 1 706 2 GP4 LM5 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C35 A1L01 . . . J 7 163.636 192.38 178.726 1 97.76 ? C35 A1L01 206 C 1 
HETATM 2 C C73 A1L01 . . . J 7 163.313 192.428 177.235 1 97.76 ? C73 A1L01 206 C 1 
HETATM 3 O O52 A1L01 . . . J 7 164.002 191.131 179.299 1 97.76 ? O52 A1L01 206 C 1 
HETATM 4 O O72 A1L01 . . . J 7 163.577 193.549 179.55 1 97.76 ? O72 A1L01 206 C 1 
HETATM 5 C C125 A1L01 . . . J 7 164.004 193.558 176.47 1 97.76 ? C125 A1L01 206 C 1 
HETATM 6 C C243 A1L01 . . . J 7 164.195 191.986 174.592 1 97.76 ? C243 A1L01 206 C 1 
HETATM 7 C C246 A1L01 . . . J 7 163.286 194.866 176.755 1 97.76 ? C246 A1L01 206 C 1 
HETATM 8 C C249 A1L01 . . . J 7 163.654 191.541 173.225 1 97.76 ? C249 A1L01 206 C 1 
HETATM 9 C C252 A1L01 . . . J 7 162.505 195.296 175.514 1 97.76 ? C252 A1L01 206 C 1 
HETATM 10 C C255 A1L01 . . . J 7 161.238 196.031 175.954 1 97.76 ? C255 A1L01 206 C 1 
HETATM 11 C C258 A1L01 . . . J 7 160.028 195.483 175.193 1 97.76 ? C258 A1L01 206 C 1 
HETATM 12 C C261 A1L01 . . . J 7 159.358 196.651 174.466 1 97.76 ? C261 A1L01 206 C 1 
HETATM 13 C C264 A1L01 . . . J 7 157.843 196.449 174.42 1 97.76 ? C264 A1L01 206 C 1 
HETATM 14 C C267 A1L01 . . . J 7 157.189 197.786 174.064 1 97.76 ? C267 A1L01 206 C 1 
HETATM 15 C C270 A1L01 . . . J 7 155.704 197.575 173.763 1 97.76 ? C270 A1L01 206 C 1 
HETATM 16 C C273 A1L01 . . . J 7 155.074 198.906 173.348 1 97.76 ? C273 A1L01 206 C 1 
HETATM 17 C C276 A1L01 . . . J 7 153.663 198.654 172.809 1 97.76 ? C276 A1L01 206 C 1 
HETATM 18 C C279 A1L01 . . . J 7 152.955 199.982 172.529 1 97.76 ? C279 A1L01 206 C 1 
HETATM 19 C C281 A1L01 . . . J 7 164.016 192.565 172.145 1 97.76 ? C281 A1L01 206 C 1 
HETATM 20 C C285 A1L01 . . . J 7 162.751 193.315 171.719 1 97.76 ? C285 A1L01 206 C 1 
HETATM 21 C C288 A1L01 . . . J 7 162.799 193.615 170.221 1 97.76 ? C288 A1L01 206 C 1 
HETATM 22 C C291 A1L01 . . . J 7 161.629 194.533 169.858 1 97.76 ? C291 A1L01 206 C 1 
HETATM 23 C C294 A1L01 . . . J 7 162.123 195.676 168.97 1 97.76 ? C294 A1L01 206 C 1 
HETATM 24 C C297 A1L01 . . . J 7 160.984 196.673 168.768 1 97.76 ? C297 A1L01 206 C 1 
HETATM 25 C C300 A1L01 . . . J 7 161.565 198.081 168.67 1 97.76 ? C300 A1L01 206 C 1 
HETATM 26 C C302 A1L01 . . . J 7 162.02 198.345 167.233 1 97.76 ? C302 A1L01 206 C 1 
HETATM 27 O O240 A1L01 . . . J 7 163.901 193.303 175.071 1 97.76 ? O240 A1L01 206 C 1 
HETATM 28 O O248 A1L01 . . . J 7 165.293 191.255 175.159 1 97.76 ? O248 A1L01 206 C 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    46 
_model_server_stats.query_time_ms           243 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           28 
#